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The map label for this gene is 28210675

Identifier: 28210675

GI number: 28210675

Start: 1033223

End: 1034047

Strand: Direct

Name: 28210675

Synonym: CTC00967

Alternate gene names: NA

Gene position: 1033223-1034047 (Clockwise)

Preceding gene: 28210674

Following gene: 28210677

Centisome position: 36.91

GC content: 24.97

Gene sequence:

>825_bases
ATGGGCAACATTAGAGGAGTGAATAAGGTGATAATAAATACAAAAAAAGAGGATATAAAAATACCTCTGGATATATTTAA
AAGATATTATATGGATGAAATAGCTTATTTTGATATAGAAACTACGGGTTTTGATAGGGAGAATAATAATATAATACTCA
TATCTTTAGGATGGTATGAAGATTATCATAATTTTATAATAAAACAGTACTATGCAGAAAGCTTACAGGAAGAATATGAT
ATATTAAAAAGCTTTGGAGAGGATATAAAGGACTTTCATGTTTGGAGTTCTTATAATGGAATAGCCTTTGATGAACCTTT
TATAAAATATAGATTTGATAAAAAAAACTTAGAATACCATTTGCCTGAAAAGCATGTAGATTTATATAGACATATAAAAC
CTTATTATAAAAAATTAGGAATGAAACGATGTAATTTAAAAAGTGTGGAAAGATTTATAGGGGTAAACAGAAAAGACGAA
ATAAATGGTGGAATTAGTGTAAAACTTTATGAAGAATACTTAAATACAGGAGATAAAAAATTAAGAGATATTATAATGCT
TCATAACTATGAGGATGTTTTAAATCTTCCTAAAATATTTAAACTAAGATATAAAATTGAAACAAGCGATGATTTAGAAA
GAGAAGATATTATTACAGAAAGACAATATAAATATCTACGCTATTTACTAAAACAAAATGATATAAGTATTAAATTTAAT
GTAAGAAAAGTATCTAAAAGGACAGCTTCAAAACTTATAGGAGAATTACTAAAAGGAACAAAGGATGAAGAAGAGTTAAA
AAGAATTGTAAAAGAAAGCTATTAA

Upstream 100 bases:

>100_bases
GAAGTAGTAGAAAAAATGTAAAATAATTATTAAATAGCCTATATAAATAGATTTTTGTATAAATCTATCTATGTGGGCTG
TTTTTATTGTATAATAGTAT

Downstream 100 bases:

>100_bases
AACCTAGTATGAAATCATACTAGGTTTTAATATTTATTTCTCATCAGGTTCTTCTGTATAACTTGAACAATGTGAAGAGG
AAGAGCAACCACTACAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Elongation Subunit Of DNA-Dependent DNA Polymerase; Tetratricopeptide TPR_2 Repeat Protein; DNA Polymerase B Exonuclease

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MGNIRGVNKVIINTKKEDIKIPLDIFKRYYMDEIAYFDIETTGFDRENNNIILISLGWYEDYHNFIIKQYYAESLQEEYD
ILKSFGEDIKDFHVWSSYNGIAFDEPFIKYRFDKKNLEYHLPEKHVDLYRHIKPYYKKLGMKRCNLKSVERFIGVNRKDE
INGGISVKLYEEYLNTGDKKLRDIIMLHNYEDVLNLPKIFKLRYKIETSDDLEREDIITERQYKYLRYLLKQNDISIKFN
VRKVSKRTASKLIGELLKGTKDEEELKRIVKESY

Sequences:

>Translated_274_residues
MGNIRGVNKVIINTKKEDIKIPLDIFKRYYMDEIAYFDIETTGFDRENNNIILISLGWYEDYHNFIIKQYYAESLQEEYD
ILKSFGEDIKDFHVWSSYNGIAFDEPFIKYRFDKKNLEYHLPEKHVDLYRHIKPYYKKLGMKRCNLKSVERFIGVNRKDE
INGGISVKLYEEYLNTGDKKLRDIIMLHNYEDVLNLPKIFKLRYKIETSDDLEREDIITERQYKYLRYLLKQNDISIKFN
VRKVSKRTASKLIGELLKGTKDEEELKRIVKESY
>Mature_273_residues
GNIRGVNKVIINTKKEDIKIPLDIFKRYYMDEIAYFDIETTGFDRENNNIILISLGWYEDYHNFIIKQYYAESLQEEYDI
LKSFGEDIKDFHVWSSYNGIAFDEPFIKYRFDKKNLEYHLPEKHVDLYRHIKPYYKKLGMKRCNLKSVERFIGVNRKDEI
NGGISVKLYEEYLNTGDKKLRDIIMLHNYEDVLNLPKIFKLRYKIETSDDLEREDIITERQYKYLRYLLKQNDISIKFNV
RKVSKRTASKLIGELLKGTKDEEELKRIVKESY

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33073; Mature: 32942

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIRGVNKVIINTKKEDIKIPLDIFKRYYMDEIAYFDIETTGFDRENNNIILISLGWYE
CCCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCHH
DYHNFIIKQYYAESLQEEYDILKSFGEDIKDFHVWSSYNGIAFDEPFIKYRFDKKNLEYH
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEE
LPEKHVDLYRHIKPYYKKLGMKRCNLKSVERFIGVNRKDEINGGISVKLYEEYLNTGDKK
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCCHHH
LRDIIMLHNYEDVLNLPKIFKLRYKIETSDDLEREDIITERQYKYLRYLLKQNDISIKFN
HHHHHHHCCCHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VRKVSKRTASKLIGELLKGTKDEEELKRIVKESY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GNIRGVNKVIINTKKEDIKIPLDIFKRYYMDEIAYFDIETTGFDRENNNIILISLGWYE
CCCCCCHHEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCHH
DYHNFIIKQYYAESLQEEYDILKSFGEDIKDFHVWSSYNGIAFDEPFIKYRFDKKNLEYH
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEE
LPEKHVDLYRHIKPYYKKLGMKRCNLKSVERFIGVNRKDEINGGISVKLYEEYLNTGDKK
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCCHHH
LRDIIMLHNYEDVLNLPKIFKLRYKIETSDDLEREDIITERQYKYLRYLLKQNDISIKFN
HHHHHHHCCCHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VRKVSKRTASKLIGELLKGTKDEEELKRIVKESY
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA