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The map label for this gene is tsr [C]

Identifier: 28210635

GI number: 28210635

Start: 981065

End: 983131

Strand: Direct

Name: tsr [C]

Synonym: CTC00924

Alternate gene names: 28210635

Gene position: 981065-983131 (Clockwise)

Preceding gene: 28210634

Following gene: 28210636

Centisome position: 35.05

GC content: 28.64

Gene sequence:

>2067_bases
ATGCTATTTTTAAGCAAAGACGATATAATAATTTATGCTAATGATGGAGGGAATTACGTGAGAAAAATTAGATCTAAAAG
TATAAAAGTTTATATTATGTTATACTTTGGAATATTATTAATTGCAATAGGAATAGGGTTAAGTGGAGTATCTTATATAA
ACTCAAAAAATACATTGGAAAATACCGTAAAAATGACTATGCCTGAAATTGTTAAACAGGGCTCTTTAGCAATAGAGACT
TACATTGAAGGTGAATTAGATAAATTAGAATTAGTGACTAATGAAAAAATATTTAAAGATGAAAAAGTTTCCCTTGATGA
TAAGTTAAAGCTTCTCTCTAATGAGGTAAAAAGAAGTGGACATGTTAACATGGGAATTGGTGATTTAAATGGAAATCTTA
AAACAACTGAAGGAGATTTAATTAATATAAGTGATAGAGAATTTTTTAAAAAAGCCTTGAAAGGAGTTAGTAGTGTAACT
GATCCAATGGTTAGTAAAGTAGACAAGAGTATTATTATAATTTATGCTTCACCACTTAAAAAAAATGGAAAGGTTATAGG
AGTTATAACTACTGTTAGAGATGCAAATGTATTTAGTGATTTTGCTAATAAAATTAAAATAGGTGAAACAGGAAGAGCAT
TTATTATAAATAAGCAAGGAATGGTCATTGCTGCTAAGAACAAAGATTTAGTAAAAAAAATGTATTCTGCCATTGATGCT
GTAAAAAAAAATTCTGATCTTCAATCTGTAGTGGACGTACATAAAAAAATGATTAAGGGTGAAAGTGGAACTGATGAATA
TTTAGCTGATGGTGTTGAAAAATATGTAGCATATACGCCATTAAAAGGCACAGGTTGGTCAATTGGAATAGATGTAGACA
AGGGTGAAATATTGCATGAGATTAATTCATTAAATAAATATATGAGTATATTGACATTAGTATTTTTAGGGGTTGGATTA
GTTATAGCATATTTAATTAGTGAAGGCATATCTAAACCTATAAAAAGATATGTAGAACATTTAAGAGTTATTGCAGATGG
CGATTTTAGTATTGAAGTATCTCAAAATGACTTAAATAAAGAAAATGAAATAGGATATATGGCTAAGGCTATTGACGGAA
TGCAAAACTCTATTACAGAAATGATAAAAAATATTAAGGAAAACTCAAGTAATATAGATATGCAATCTGATAATTTAGCA
AATCTTTCACAAGAAATGTCAAATTCATCTGAAAATGTATCTATGTCTATTCAAAATGTCGCAAAAGGGGCAGGGGAACA
AGCTTCAGATTTAATGGAGATAACTAGTATACTTAATGATTTTAGTGTTCAATTAGATGATATGGTAAGAGATATAGAAG
AAGTTGATACAAGCAATAAAGATATCAAAATTGTAGCAGATAAAAGCAGTAAGGATATGGACAATGTAATAAATTCTGTT
GAAAGAGTTAATAATACTTTCAATGAATTGATCGTAAAAATTAAAAATGTAGGTAGTAATATAACAAAAATAAATGATAT
AACGGCTCTTATCAATACTATATCAGAACAGACTAATTTGTTAGCTTTAAATGCAGCAATTGAAGCAGCAAGAGCAGGGG
AAGCGGGAAAAGGATTCAGTGTAGTTGCAGATGAAATTAGAAAATTAGCAGAACAAAGTAAGGAATCATCAGAAAGTATT
ACGGTAATTGTTAGTAACATATCAAAAGACACAGATATTATGATTGATACTACAGAAAATGTTAAAATCCAGTTAGATAG
CCAAAAGAAAGAAATCGATATTGCAATGACTTCTTTTGAAAAGATAACTAAATCTGTAGATATAGTAATTCCTAAAATTA
ATGAAACTAGTAAATTAGCTATAATCTTGGATAAAAGAAAACAATCTATATTAGAAAAGTTAGAATCAACATCATCAATT
TCAGAAGAAGTATCAGCATCCTCGGAAGAAATTGCATCCTCTACAGAAGAGATGAATTTTTCTACAGATGAAGTAGCAGC
TGCATCTCAAATGTTAAGTAATATGACAGGAACTATGATGGCACAGATTGATAAGTTTAAAATTTAG

Upstream 100 bases:

>100_bases
AAAGCATCCTAATTTGAATAATAGTATAAATAAAATTGTGAGGTTGTTTCAAGGACATTTTAGATGCTTGATTTTCGATA
GTTCGTAATAATTTAAATTA

Downstream 100 bases:

>100_bases
TCTGATAATAAACTTATATAAACTTTCATAAAAGTTTTTCAATTAATATATTTCAATAACTAGATAGAAGTATTATTATG
CTAATATCTAGTTATTTTGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MLFLSKDDIIIYANDGGNYVRKIRSKSIKVYIMLYFGILLIAIGIGLSGVSYINSKNTLENTVKMTMPEIVKQGSLAIET
YIEGELDKLELVTNEKIFKDEKVSLDDKLKLLSNEVKRSGHVNMGIGDLNGNLKTTEGDLINISDREFFKKALKGVSSVT
DPMVSKVDKSIIIIYASPLKKNGKVIGVITTVRDANVFSDFANKIKIGETGRAFIINKQGMVIAAKNKDLVKKMYSAIDA
VKKNSDLQSVVDVHKKMIKGESGTDEYLADGVEKYVAYTPLKGTGWSIGIDVDKGEILHEINSLNKYMSILTLVFLGVGL
VIAYLISEGISKPIKRYVEHLRVIADGDFSIEVSQNDLNKENEIGYMAKAIDGMQNSITEMIKNIKENSSNIDMQSDNLA
NLSQEMSNSSENVSMSIQNVAKGAGEQASDLMEITSILNDFSVQLDDMVRDIEEVDTSNKDIKIVADKSSKDMDNVINSV
ERVNNTFNELIVKIKNVGSNITKINDITALINTISEQTNLLALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKESSESI
TVIVSNISKDTDIMIDTTENVKIQLDSQKKEIDIAMTSFEKITKSVDIVIPKINETSKLAIILDKRKQSILEKLESTSSI
SEEVSASSEEIASSTEEMNFSTDEVAAASQMLSNMTGTMMAQIDKFKI

Sequences:

>Translated_688_residues
MLFLSKDDIIIYANDGGNYVRKIRSKSIKVYIMLYFGILLIAIGIGLSGVSYINSKNTLENTVKMTMPEIVKQGSLAIET
YIEGELDKLELVTNEKIFKDEKVSLDDKLKLLSNEVKRSGHVNMGIGDLNGNLKTTEGDLINISDREFFKKALKGVSSVT
DPMVSKVDKSIIIIYASPLKKNGKVIGVITTVRDANVFSDFANKIKIGETGRAFIINKQGMVIAAKNKDLVKKMYSAIDA
VKKNSDLQSVVDVHKKMIKGESGTDEYLADGVEKYVAYTPLKGTGWSIGIDVDKGEILHEINSLNKYMSILTLVFLGVGL
VIAYLISEGISKPIKRYVEHLRVIADGDFSIEVSQNDLNKENEIGYMAKAIDGMQNSITEMIKNIKENSSNIDMQSDNLA
NLSQEMSNSSENVSMSIQNVAKGAGEQASDLMEITSILNDFSVQLDDMVRDIEEVDTSNKDIKIVADKSSKDMDNVINSV
ERVNNTFNELIVKIKNVGSNITKINDITALINTISEQTNLLALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKESSESI
TVIVSNISKDTDIMIDTTENVKIQLDSQKKEIDIAMTSFEKITKSVDIVIPKINETSKLAIILDKRKQSILEKLESTSSI
SEEVSASSEEIASSTEEMNFSTDEVAAASQMLSNMTGTMMAQIDKFKI
>Mature_688_residues
MLFLSKDDIIIYANDGGNYVRKIRSKSIKVYIMLYFGILLIAIGIGLSGVSYINSKNTLENTVKMTMPEIVKQGSLAIET
YIEGELDKLELVTNEKIFKDEKVSLDDKLKLLSNEVKRSGHVNMGIGDLNGNLKTTEGDLINISDREFFKKALKGVSSVT
DPMVSKVDKSIIIIYASPLKKNGKVIGVITTVRDANVFSDFANKIKIGETGRAFIINKQGMVIAAKNKDLVKKMYSAIDA
VKKNSDLQSVVDVHKKMIKGESGTDEYLADGVEKYVAYTPLKGTGWSIGIDVDKGEILHEINSLNKYMSILTLVFLGVGL
VIAYLISEGISKPIKRYVEHLRVIADGDFSIEVSQNDLNKENEIGYMAKAIDGMQNSITEMIKNIKENSSNIDMQSDNLA
NLSQEMSNSSENVSMSIQNVAKGAGEQASDLMEITSILNDFSVQLDDMVRDIEEVDTSNKDIKIVADKSSKDMDNVINSV
ERVNNTFNELIVKIKNVGSNITKINDITALINTISEQTNLLALNAAIEAARAGEAGKGFSVVADEIRKLAEQSKESSESI
TVIVSNISKDTDIMIDTTENVKIQLDSQKKEIDIAMTSFEKITKSVDIVIPKINETSKLAIILDKRKQSILEKLESTSSI
SEEVSASSEEIASSTEEMNFSTDEVAAASQMLSNMTGTMMAQIDKFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=373, Percent_Identity=25.7372654155496, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1787690, Length=272, Percent_Identity=27.2058823529412, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1788195, Length=241, Percent_Identity=27.8008298755187, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=338, Percent_Identity=26.0355029585799, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI1788194, Length=310, Percent_Identity=23.5483870967742, Blast_Score=76, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75613; Mature: 75613

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLSKDDIIIYANDGGNYVRKIRSKSIKVYIMLYFGILLIAIGIGLSGVSYINSKNTLE
CEEEECCCEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCHHHH
NTVKMTMPEIVKQGSLAIETYIEGELDKLELVTNEKIFKDEKVSLDDKLKLLSNEVKRSG
HHHHHHHHHHHHCCCEEEEEEECCCCHHEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCC
HVNMGIGDLNGNLKTTEGDLINISDREFFKKALKGVSSVTDPMVSKVDKSIIIIYASPLK
CCEEEEECCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KNGKVIGVITTVRDANVFSDFANKIKIGETGRAFIINKQGMVIAAKNKDLVKKMYSAIDA
CCCCEEEEEEEECCHHHHHHHHHCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHH
VKKNSDLQSVVDVHKKMIKGESGTDEYLADGVEKYVAYTPLKGTGWSIGIDVDKGEILHE
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHH
INSLNKYMSILTLVFLGVGLVIAYLISEGISKPIKRYVEHLRVIADGDFSIEVSQNDLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCC
ENEIGYMAKAIDGMQNSITEMIKNIKENSSNIDMQSDNLANLSQEMSNSSENVSMSIQNV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHH
AKGAGEQASDLMEITSILNDFSVQLDDMVRDIEEVDTSNKDIKIVADKSSKDMDNVINSV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
ERVNNTFNELIVKIKNVGSNITKINDITALINTISEQTNLLALNAAIEAARAGEAGKGFS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCHH
VVADEIRKLAEQSKESSESITVIVSNISKDTDIMIDTTENVKIQLDSQKKEIDIAMTSFE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH
KITKSVDIVIPKINETSKLAIILDKRKQSILEKLESTSSISEEVSASSEEIASSTEEMNF
HHHCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
STDEVAAASQMLSNMTGTMMAQIDKFKI
CHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFLSKDDIIIYANDGGNYVRKIRSKSIKVYIMLYFGILLIAIGIGLSGVSYINSKNTLE
CEEEECCCEEEEECCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCHHHCCCCHHHH
NTVKMTMPEIVKQGSLAIETYIEGELDKLELVTNEKIFKDEKVSLDDKLKLLSNEVKRSG
HHHHHHHHHHHHCCCEEEEEEECCCCHHEEEECCCHHCCCCCCCHHHHHHHHHHHHHHCC
HVNMGIGDLNGNLKTTEGDLINISDREFFKKALKGVSSVTDPMVSKVDKSIIIIYASPLK
CCEEEEECCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
KNGKVIGVITTVRDANVFSDFANKIKIGETGRAFIINKQGMVIAAKNKDLVKKMYSAIDA
CCCCEEEEEEEECCHHHHHHHHHCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHH
VKKNSDLQSVVDVHKKMIKGESGTDEYLADGVEKYVAYTPLKGTGWSIGIDVDKGEILHE
HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHH
INSLNKYMSILTLVFLGVGLVIAYLISEGISKPIKRYVEHLRVIADGDFSIEVSQNDLNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCC
ENEIGYMAKAIDGMQNSITEMIKNIKENSSNIDMQSDNLANLSQEMSNSSENVSMSIQNV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHH
AKGAGEQASDLMEITSILNDFSVQLDDMVRDIEEVDTSNKDIKIVADKSSKDMDNVINSV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
ERVNNTFNELIVKIKNVGSNITKINDITALINTISEQTNLLALNAAIEAARAGEAGKGFS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCHH
VVADEIRKLAEQSKESSESITVIVSNISKDTDIMIDTTENVKIQLDSQKKEIDIAMTSFE
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH
KITKSVDIVIPKINETSKLAIILDKRKQSILEKLESTSSISEEVSASSEEIASSTEEMNF
HHHCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
STDEVAAASQMLSNMTGTMMAQIDKFKI
CHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA