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The map label for this gene is padR

Identifier: 28210598

GI number: 28210598

Start: 939815

End: 940249

Strand: Direct

Name: padR

Synonym: CTC00885

Alternate gene names: NA

Gene position: 939815-940249 (Clockwise)

Preceding gene: 28210597

Following gene: 28210599

Centisome position: 33.57

GC content: 28.97

Gene sequence:

>435_bases
ATGACGAAAAAATTATCCGATGATAAAGGATATAATTACGATAAATATAAAAAGGAGCTAAAAAACTTTAAAAAAGTTGA
AAAGGAAAATAAAGCAGTAGGCCAGGTGTTTACTAAAGGTTTGCTGCCTCTATATGTTCTTCAAATACTAAGCATATCTC
CCACAAATGGAAATGATATAGCAACTCAAATAGGTAAAAAAACAAATGGACTTTGGATACCGAGTACAGGGGGCATTTAT
CCTTTATTAAAGAAGTTTGAAAAGGAGAATTTAGTAGAGGGTAGATGGGATGATAGAAATAATAAAATGCAAAAGATATA
TACTATAACAGAAAGTGGAAAAAAGGACTTGGAAGAAAGAAAACAACTACTAAAACAAAATATAGAAGAAGCCTTGAAAG
TATTTAACATAGTTTATAAAGATTTATATGAATAA

Upstream 100 bases:

>100_bases
TAGCAGGAATAGAGCTTAGGGGAGAAATAAGTCCTGTAGCTGGTGCTCATAGTGGTCCTGGACTTGTAGGGATACTTATA
GTAGAGGAGTTTTAATTCAA

Downstream 100 bases:

>100_bases
AAAAGAAATCATTAATAAAATGGTAATAATATGATATAATTAGAGAAAAAATGAAAAATAAAATAAAGAAAACGTTTTCT
TAAAATTGCTTGGAATTGGG

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: PadR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQILSISPTNGNDIATQIGKKTNGLWIPSTGGIY
PLLKKFEKENLVEGRWDDRNNKMQKIYTITESGKKDLEERKQLLKQNIEEALKVFNIVYKDLYE

Sequences:

>Translated_144_residues
MTKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQILSISPTNGNDIATQIGKKTNGLWIPSTGGIY
PLLKKFEKENLVEGRWDDRNNKMQKIYTITESGKKDLEERKQLLKQNIEEALKVFNIVYKDLYE
>Mature_143_residues
TKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQILSISPTNGNDIATQIGKKTNGLWIPSTGGIYP
LLKKFEKENLVEGRWDDRNNKMQKIYTITESGKKDLEERKQLLKQNIEEALKVFNIVYKDLYE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16767; Mature: 16635

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQILSISPTNGNDI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ATQIGKKTNGLWIPSTGGIYPLLKKFEKENLVEGRWDDRNNKMQKIYTITESGKKDLEER
HHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
KQLLKQNIEEALKVFNIVYKDLYE
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQILSISPTNGNDI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
ATQIGKKTNGLWIPSTGGIYPLLKKFEKENLVEGRWDDRNNKMQKIYTITESGKKDLEER
HHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
KQLLKQNIEEALKVFNIVYKDLYE
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA