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The map label for this gene is degV

Identifier: 28210597

GI number: 28210597

Start: 938958

End: 939809

Strand: Direct

Name: degV

Synonym: CTC00884

Alternate gene names: NA

Gene position: 938958-939809 (Clockwise)

Preceding gene: 28210596

Following gene: 28210598

Centisome position: 33.54

GC content: 29.23

Gene sequence:

>852_bases
ATGGAAAAGATTGCATTAATAACAGATACAACTGCGGATCTATCTGAAAATATTATAAATAAATACAATATAAATGTACT
ACCATTTAGAATTATATACAAGGATAGAGAATATAAGGATAGAGTGGATATTACACCAAAGGAAGTATATGAAAACTTAG
ATAAAGAGATGCCAAAATCTTCATTACCATCAATTGAGGATATGGAGAACTTATTTTTAAAGTTAAAAAAAGAAGGATAT
ACCCATGCAATAGCTGTAGTATTATCATCTGGGTTGTCAGGCATATATAATGCTGTAAAGTTAATAAGTGAAAACCATCC
AGAAATAAATACTTATGTGTGTGATTCAAAAAGTATATCCATAGGAGAAGCTGTACTTGTAGAAACTTGTGCTGAAATGA
TAAAGAAAAATGAGAAGTTTGATAATATAATAAAAGAAATGGATAATCTTAAAAATAGATGTAATTTATTTTTCATGGTG
GATACTTTGGAGTATTTAAAACGAGGTGGGAGAATAGGTAAAGTTTCTGGTACAATTGGAGAATTACTAAATATAAAGCC
TATAATAGGTGTTGATAAAAATGATGGAAAATATTATACAATTGATAAAGCTAGGGGTAGAAAACAGTCCATGAATAAAT
TAATAGATATAGTAAAGAAGACATTGGTAAATAGTAGAGGATACATATATATGGGTCATGGTAATGGTTTGGAAATTTGT
AAAAATGTCTATGAAAATATAAGAAAATTAAATAATGTAGCAGGAATAGAGCTTAGGGGAGAAATAAGTCCTGTAGCTGG
TGCTCATAGTGGTCCTGGACTTGTAGGGATACTTATAGTAGAGGAGTTTTAA

Upstream 100 bases:

>100_bases
ATTAATATTAATTGGTATCAATAGTGATATATATCACTATTGACATATATCACTATTGATAATATTATAAATATAAAATC
TATATTTAGGAGGAATTTAT

Downstream 100 bases:

>100_bases
TTCAAATGACGAAAAAATTATCCGATGATAAAGGATATAATTACGATAAATATAAAAAGGAGCTAAAAAACTTTAAAAAA
GTTGAAAAGGAAAATAAAGC

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MEKIALITDTTADLSENIINKYNINVLPFRIIYKDREYKDRVDITPKEVYENLDKEMPKSSLPSIEDMENLFLKLKKEGY
THAIAVVLSSGLSGIYNAVKLISENHPEINTYVCDSKSISIGEAVLVETCAEMIKKNEKFDNIIKEMDNLKNRCNLFFMV
DTLEYLKRGGRIGKVSGTIGELLNIKPIIGVDKNDGKYYTIDKARGRKQSMNKLIDIVKKTLVNSRGYIYMGHGNGLEIC
KNVYENIRKLNNVAGIELRGEISPVAGAHSGPGLVGILIVEEF

Sequences:

>Translated_283_residues
MEKIALITDTTADLSENIINKYNINVLPFRIIYKDREYKDRVDITPKEVYENLDKEMPKSSLPSIEDMENLFLKLKKEGY
THAIAVVLSSGLSGIYNAVKLISENHPEINTYVCDSKSISIGEAVLVETCAEMIKKNEKFDNIIKEMDNLKNRCNLFFMV
DTLEYLKRGGRIGKVSGTIGELLNIKPIIGVDKNDGKYYTIDKARGRKQSMNKLIDIVKKTLVNSRGYIYMGHGNGLEIC
KNVYENIRKLNNVAGIELRGEISPVAGAHSGPGLVGILIVEEF
>Mature_283_residues
MEKIALITDTTADLSENIINKYNINVLPFRIIYKDREYKDRVDITPKEVYENLDKEMPKSSLPSIEDMENLFLKLKKEGY
THAIAVVLSSGLSGIYNAVKLISENHPEINTYVCDSKSISIGEAVLVETCAEMIKKNEKFDNIIKEMDNLKNRCNLFFMV
DTLEYLKRGGRIGKVSGTIGELLNIKPIIGVDKNDGKYYTIDKARGRKQSMNKLIDIVKKTLVNSRGYIYMGHGNGLEIC
KNVYENIRKLNNVAGIELRGEISPVAGAHSGPGLVGILIVEEF

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31812; Mature: 31812

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIALITDTTADLSENIINKYNINVLPFRIIYKDREYKDRVDITPKEVYENLDKEMPKS
CCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
SLPSIEDMENLFLKLKKEGYTHAIAVVLSSGLSGIYNAVKLISENHPEINTYVCDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
IGEAVLVETCAEMIKKNEKFDNIIKEMDNLKNRCNLFFMVDTLEYLKRGGRIGKVSGTIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCCCCEEECCCHHH
ELLNIKPIIGVDKNDGKYYTIDKARGRKQSMNKLIDIVKKTLVNSRGYIYMGHGNGLEIC
HHHCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
KNVYENIRKLNNVAGIELRGEISPVAGAHSGPGLVGILIVEEF
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MEKIALITDTTADLSENIINKYNINVLPFRIIYKDREYKDRVDITPKEVYENLDKEMPKS
CCCEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
SLPSIEDMENLFLKLKKEGYTHAIAVVLSSGLSGIYNAVKLISENHPEINTYVCDSKSIS
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
IGEAVLVETCAEMIKKNEKFDNIIKEMDNLKNRCNLFFMVDTLEYLKRGGRIGKVSGTIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCCCCEEECCCHHH
ELLNIKPIIGVDKNDGKYYTIDKARGRKQSMNKLIDIVKKTLVNSRGYIYMGHGNGLEIC
HHHCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
KNVYENIRKLNNVAGIELRGEISPVAGAHSGPGLVGILIVEEF
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]