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The map label for this gene is ygeA [C]

Identifier: 28210540

GI number: 28210540

Start: 872010

End: 872705

Strand: Direct

Name: ygeA [C]

Synonym: CTC00823

Alternate gene names: 28210540

Gene position: 872010-872705 (Clockwise)

Preceding gene: 28210539

Following gene: 28210541

Centisome position: 31.15

GC content: 30.6

Gene sequence:

>696_bases
ATGAGTAAAATAGTAGGGATAATTGGGGGAATGGGGCCTAAAGCTACGGTAGACCTTTACAATAAAATTGTAGACTACAC
AGATGCAAGCTCTGATCAAGATCATTTACATGTTGTAATCGACGGCAATGCTAAAATACCTGATAGAACAAGTTATATAT
TGGGGAATGGAAAAAGTCCTTTAGATGAACTCGTAAAAACTGGAGAAAGGCTTAAAAATGCAGGAGCAGATTTTTTAATA
ATGCCCTGTAATACAGCACATTATTTTTACGATGAATTATATGAAAAGCTTAATATGCCTTTTATTAACATGATAGAAGA
AGTAGGAAAATATATTGTAACTAAACATGGAAAAATAAAAGTTGGGCTCTTGGCAACACTTGGAACATACCAAGGAAAGA
TATATGAAAGATATTGTAAGGAATTAGGGTTAGATATAATTATACCAAGTAAAGAGGTAAGACAAAAAGTTTCAGATGCA
GTGTATATAGTAAAAAGTGGACAAAGAAATTTTACTAAAGAATTTGCAATGGATATGTTAAAAGAGTTTAATGAAAAAGA
TGTAAATGCAGTTATATTGGGATGTACTGAATTACCTCTAATATTTCAACCTTTAGAAAATGATTTAAAAGATTTTGAGT
TCATATCTTCCACAGATATTTTAGCCAAGGAAACAATAAAAAGGGTTAAAAAATAG

Upstream 100 bases:

>100_bases
ATGTAGCCGCCTCAATTGTAGTAGGAGCTAGTGAAAATGAAATAAACTATGAAAATGCAAGCATAAAGAAAACAATGAGT
AGTTAAAAAGGCAATGTCTT

Downstream 100 bases:

>100_bases
CTATTTATTCAAACTTTATTTATTTAAAATAGTATAAGGGAGGAATTTTATATGCAATACAGATTAGAAAGTGATTCAGT
AGGTGAAAAAAGAATACCAA

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDGNAKIPDRTSYILGNGKSPLDELVKTGERLKNAGADFLI
MPCNTAHYFYDELYEKLNMPFINMIEEVGKYIVTKHGKIKVGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDA
VYIVKSGQRNFTKEFAMDMLKEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISSTDILAKETIKRVKK

Sequences:

>Translated_231_residues
MSKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDGNAKIPDRTSYILGNGKSPLDELVKTGERLKNAGADFLI
MPCNTAHYFYDELYEKLNMPFINMIEEVGKYIVTKHGKIKVGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDA
VYIVKSGQRNFTKEFAMDMLKEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISSTDILAKETIKRVKK
>Mature_230_residues
SKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDGNAKIPDRTSYILGNGKSPLDELVKTGERLKNAGADFLIM
PCNTAHYFYDELYEKLNMPFINMIEEVGKYIVTKHGKIKVGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDAV
YIVKSGQRNFTKEFAMDMLKEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISSTDILAKETIKRVKK

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=207, Percent_Identity=24.1545893719807, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 26039; Mature: 25907

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDGNAKIPDRTSYILGNGKSP
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCC
LDELVKTGERLKNAGADFLIMPCNTAHYFYDELYEKLNMPFINMIEEVGKYIVTKHGKIK
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE
VGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIVKSGQRNFTKEFAMDML
EEHEEHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
KEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISSTDILAKETIKRVKK
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SKIVGIIGGMGPKATVDLYNKIVDYTDASSDQDHLHVVIDGNAKIPDRTSYILGNGKSP
CCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCC
LDELVKTGERLKNAGADFLIMPCNTAHYFYDELYEKLNMPFINMIEEVGKYIVTKHGKIK
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE
VGLLATLGTYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIVKSGQRNFTKEFAMDML
EEHEEHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
KEFNEKDVNAVILGCTELPLIFQPLENDLKDFEFISSTDILAKETIKRVKK
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]