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The map label for this gene is yomE [H]

Identifier: 28210508

GI number: 28210508

Start: 837786

End: 838793

Strand: Direct

Name: yomE [H]

Synonym: CTC00791

Alternate gene names: 28210508

Gene position: 837786-838793 (Clockwise)

Preceding gene: 28210507

Following gene: 28210509

Centisome position: 29.93

GC content: 31.15

Gene sequence:

>1008_bases
ATGGTAAAAAATAGGAAGATAAGAAAGAAAAAGAAGAAATTTTCATTTAAAATATTTGCATGTTTTTTATTATTTGAAAT
TGTATTTACTGCAGCCAGTGCTCCTTTTTTAATTTACTATGGTCCTTTTAAAAATTTAAGAAAAAATTTAGTAGGGGCAG
CTATGAGTACATTAAGTCATCAATATATAGCTACGGCATTTCTTTCAGATAAAAAAATCAAAGAAATTTTACAAGAAGAT
GTTGTAGAAGTTTTAGAACAAGGAAATTCAATAAAAGATGTACAATTTAATAATAAACATGATAAAAATATTGAAAGATA
CGATATAGATGGTGGCAAATTTAAAGGATATATGTTAGTTGTTCATGATGCTAGTAGGGTAAAAGTTGGACATAGTAGTA
AAATTCCAAAGTCAGGAGAATTAACAAGCAAGATAGCAAAAGATAATAAAGCTATAGCAGCTATAAATGGTGGAGGGTTT
ACAGATAAAAATGACGATGGAAATTGGACAGGTACTGGAGGACAACCAGTAGGAATACTAATGAGTAATGGTGAACTCGT
ACATAATGATATTAAAGACTTAAATAAAAAAGAAGATGTAATGGCCATTACTTCAAAGGGAGTTTTGCTAGTTGGAAAGT
ATAGTTTAAATGAAATGGAAGATTTGGATGTAAAAGAAGCTATAACCTTTGGTCCAGCATTAGTTGTTAATGGACAACCT
ACTATTAAGTCAGGTAATGGTGGACAGGGTCCTGCGCCAAGAACAGCTATAGGGCAAAGAAAAGATGGGTCTATTCTTTT
ATTAGTTGTAGATGGAAGACAGTTTAGAAGTATCGGTGCTACATTAAAAGATATACAGGATATTATGTTGGAATATGGAG
CTTATAATGCAACAAACTTAGATGGGGGATCTTCTGCAACAATGTATTATGATGGTGAGGTAATTAATAATCCTTGTGAT
CCATTAGGTGAAAGATCAATACCTTCAGTTGTATATGTTGAACAATAA

Upstream 100 bases:

>100_bases
ATATAACTATTATTAGGATAAATATAATAAATATTTCTATTTAAAAATCAATTAATTTATTATAAAATGTATGTAGTATA
TGTGAAAGGAAAGGAATAAT

Downstream 100 bases:

>100_bases
GGGAGAGTAACAATGAAAAGATTTAAAAAAGTATTTGCATGGATAATATTATCCTTAATAGTTCAGAGTTCTATGTATTT
TTATATAGATAAATATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVKNRKIRKKKKKFSFKIFACFLLFEIVFTAASAPFLIYYGPFKNLRKNLVGAAMSTLSHQYIATAFLSDKKIKEILQED
VVEVLEQGNSIKDVQFNNKHDKNIERYDIDGGKFKGYMLVVHDASRVKVGHSSKIPKSGELTSKIAKDNKAIAAINGGGF
TDKNDDGNWTGTGGQPVGILMSNGELVHNDIKDLNKKEDVMAITSKGVLLVGKYSLNEMEDLDVKEAITFGPALVVNGQP
TIKSGNGGQGPAPRTAIGQRKDGSILLLVVDGRQFRSIGATLKDIQDIMLEYGAYNATNLDGGSSATMYYDGEVINNPCD
PLGERSIPSVVYVEQ

Sequences:

>Translated_335_residues
MVKNRKIRKKKKKFSFKIFACFLLFEIVFTAASAPFLIYYGPFKNLRKNLVGAAMSTLSHQYIATAFLSDKKIKEILQED
VVEVLEQGNSIKDVQFNNKHDKNIERYDIDGGKFKGYMLVVHDASRVKVGHSSKIPKSGELTSKIAKDNKAIAAINGGGF
TDKNDDGNWTGTGGQPVGILMSNGELVHNDIKDLNKKEDVMAITSKGVLLVGKYSLNEMEDLDVKEAITFGPALVVNGQP
TIKSGNGGQGPAPRTAIGQRKDGSILLLVVDGRQFRSIGATLKDIQDIMLEYGAYNATNLDGGSSATMYYDGEVINNPCD
PLGERSIPSVVYVEQ
>Mature_335_residues
MVKNRKIRKKKKKFSFKIFACFLLFEIVFTAASAPFLIYYGPFKNLRKNLVGAAMSTLSHQYIATAFLSDKKIKEILQED
VVEVLEQGNSIKDVQFNNKHDKNIERYDIDGGKFKGYMLVVHDASRVKVGHSSKIPKSGELTSKIAKDNKAIAAINGGGF
TDKNDDGNWTGTGGQPVGILMSNGELVHNDIKDLNKKEDVMAITSKGVLLVGKYSLNEMEDLDVKEAITFGPALVVNGQP
TIKSGNGGQGPAPRTAIGQRKDGSILLLVVDGRQFRSIGATLKDIQDIMLEYGAYNATNLDGGSSATMYYDGEVINNPCD
PLGERSIPSVVYVEQ

Specific function: Unknown

COG id: COG4632

COG function: function code G; Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018711
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF09992 DUF2233 [H]

EC number: NA

Molecular weight: Translated: 36618; Mature: 36618

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNRKIRKKKKKFSFKIFACFLLFEIVFTAASAPFLIYYGPFKNLRKNLVGAAMSTLSH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
QYIATAFLSDKKIKEILQEDVVEVLEQGNSIKDVQFNNKHDKNIERYDIDGGKFKGYMLV
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEE
VHDASRVKVGHSSKIPKSGELTSKIAKDNKAIAAINGGGFTDKNDDGNWTGTGGQPVGIL
EECCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEE
MSNGELVHNDIKDLNKKEDVMAITSKGVLLVGKYSLNEMEDLDVKEAITFGPALVVNGQP
EECCCEEHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCC
TIKSGNGGQGPAPRTAIGQRKDGSILLLVVDGRQFRSIGATLKDIQDIMLEYGAYNATNL
CEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGGSSATMYYDGEVINNPCDPLGERSIPSVVYVEQ
CCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MVKNRKIRKKKKKFSFKIFACFLLFEIVFTAASAPFLIYYGPFKNLRKNLVGAAMSTLSH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHH
QYIATAFLSDKKIKEILQEDVVEVLEQGNSIKDVQFNNKHDKNIERYDIDGGKFKGYMLV
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEEE
VHDASRVKVGHSSKIPKSGELTSKIAKDNKAIAAINGGGFTDKNDDGNWTGTGGQPVGIL
EECCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEE
MSNGELVHNDIKDLNKKEDVMAITSKGVLLVGKYSLNEMEDLDVKEAITFGPALVVNGQP
EECCCEEHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCC
TIKSGNGGQGPAPRTAIGQRKDGSILLLVVDGRQFRSIGATLKDIQDIMLEYGAYNATNL
CEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DGGSSATMYYDGEVINNPCDPLGERSIPSVVYVEQ
CCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]