| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210503
Identifier: 28210503
GI number: 28210503
Start: 832306
End: 833145
Strand: Direct
Name: 28210503
Synonym: CTC00786
Alternate gene names: NA
Gene position: 832306-833145 (Clockwise)
Preceding gene: 28210499
Following gene: 28210504
Centisome position: 29.73
GC content: 25.0
Gene sequence:
>840_bases ATGAAGATGGAAAAAATTACAGTTTATCCGGGAAGTTTTGGAGAAATAATTCAAGGAAAATTTCGAGAAAAAGATATATT ATGTTCATGTCCTATAAACTTATATACAAAAGTTAGGGTTTATGAAACTTTAGAAGAAAAGAATATAAATATGCATTATA AATCTTATAAATTTATGTTAAATATATTAAAAGAATGGGGTTATGATAAATATTTTCATAATTTATCTATAGATATAAAA TCCCAAGTTCCAAGGGGTAAGGGATTTGCAAGTAGTACTGCTGATTTAGCAGCAGTATATAATTGTCTTATAAATATATT TCAAAAGCAATATAATCAAAAAGAGCTAATAGATAATTGTATAAAAATAGAACCAACAGATAGTATTATTTTTGATGAAT TAACTCTATTCGATTATAGAAAAGGTAATTATAGAGAAAGTATAGGAAAATGTCCACAATTTAATATATTAGTTTTTGAA GGGAATAAGGTGGTAAATACTGTAGAATTCAATAATAAACCCCTACCACCTTTAAGTAATATAGAAGATTTAGTGCCTAC TTTAAAAGAAGGCATAAAAAATAAAGACATAAATAAAATAGCTTACTGTTCTACAGAAAGTATAGTAAGAAATACTAATA GATTAGGATACTCAATATTATCTATTGTACTTAAAATTCAAAAAGAAATAGGAGCTTACGGAATAATAGGAGCGCATAGT GGAGATGCTTTAGGGATAATATATGAAGGGGATATAAAGGATGATATATTTAACAAGTATTTTAATATACTAAAAGGAAT TAAAACATATAAAGTAAAATCTTTAGATAAGTGGATATAA
Upstream 100 bases:
>100_bases TTCTGTTGAGTGTAACACCTAAAAATACCTATGTCAATATCCCCTAAAATTTGATAAAATAAAATATAGCATAAAATTAT AGCATGAAAAATAAGGGGAA
Downstream 100 bases:
>100_bases CAAGTGAAAAATTAAGTATACATAAGATAAATTATTATAATGATAAAGTATCAATTTGAAATATAGTTATAAATATAATA AAATACTTTAATAATATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase; Propanediol Utilization Protein PduX; Ghmp Kinase; PduX-Like Protein; Protein Involved In Propanediol Utilization; Propanediol Utilization Kinase PduX; PduX Protein; Cobalamin Biosynthesis Kinase; Propanediol Utilization Kinase; L-Threonine Kinase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKMEKITVYPGSFGEIIQGKFREKDILCSCPINLYTKVRVYETLEEKNINMHYKSYKFMLNILKEWGYDKYFHNLSIDIK SQVPRGKGFASSTADLAAVYNCLINIFQKQYNQKELIDNCIKIEPTDSIIFDELTLFDYRKGNYRESIGKCPQFNILVFE GNKVVNTVEFNNKPLPPLSNIEDLVPTLKEGIKNKDINKIAYCSTESIVRNTNRLGYSILSIVLKIQKEIGAYGIIGAHS GDALGIIYEGDIKDDIFNKYFNILKGIKTYKVKSLDKWI
Sequences:
>Translated_279_residues MKMEKITVYPGSFGEIIQGKFREKDILCSCPINLYTKVRVYETLEEKNINMHYKSYKFMLNILKEWGYDKYFHNLSIDIK SQVPRGKGFASSTADLAAVYNCLINIFQKQYNQKELIDNCIKIEPTDSIIFDELTLFDYRKGNYRESIGKCPQFNILVFE GNKVVNTVEFNNKPLPPLSNIEDLVPTLKEGIKNKDINKIAYCSTESIVRNTNRLGYSILSIVLKIQKEIGAYGIIGAHS GDALGIIYEGDIKDDIFNKYFNILKGIKTYKVKSLDKWI >Mature_279_residues MKMEKITVYPGSFGEIIQGKFREKDILCSCPINLYTKVRVYETLEEKNINMHYKSYKFMLNILKEWGYDKYFHNLSIDIK SQVPRGKGFASSTADLAAVYNCLINIFQKQYNQKELIDNCIKIEPTDSIIFDELTLFDYRKGNYRESIGKCPQFNILVFE GNKVVNTVEFNNKPLPPLSNIEDLVPTLKEGIKNKDINKIAYCSTESIVRNTNRLGYSILSIVLKIQKEIGAYGIIGAHS GDALGIIYEGDIKDDIFNKYFNILKGIKTYKVKSLDKWI
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32113; Mature: 32113
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMEKITVYPGSFGEIIQGKFREKDILCSCPINLYTKVRVYETLEEKNINMHYKSYKFML CCCCEEEECCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH NILKEWGYDKYFHNLSIDIKSQVPRGKGFASSTADLAAVYNCLINIFQKQYNQKELIDNC HHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKIEPTDSIIFDELTLFDYRKGNYRESIGKCPQFNILVFEGNKVVNTVEFNNKPLPPLSN EECCCCCCCHHHHHHEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCC IEDLVPTLKEGIKNKDINKIAYCSTESIVRNTNRLGYSILSIVLKIQKEIGAYGIIGAHS HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC GDALGIIYEGDIKDDIFNKYFNILKGIKTYKVKSLDKWI CCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MKMEKITVYPGSFGEIIQGKFREKDILCSCPINLYTKVRVYETLEEKNINMHYKSYKFML CCCCEEEECCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH NILKEWGYDKYFHNLSIDIKSQVPRGKGFASSTADLAAVYNCLINIFQKQYNQKELIDNC HHHHHCCCHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKIEPTDSIIFDELTLFDYRKGNYRESIGKCPQFNILVFEGNKVVNTVEFNNKPLPPLSN EECCCCCCCHHHHHHEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCC IEDLVPTLKEGIKNKDINKIAYCSTESIVRNTNRLGYSILSIVLKIQKEIGAYGIIGAHS HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC GDALGIIYEGDIKDDIFNKYFNILKGIKTYKVKSLDKWI CCEEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA