Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210499

Identifier: 28210499

GI number: 28210499

Start: 828628

End: 829236

Strand: Direct

Name: 28210499

Synonym: CTC00782

Alternate gene names: NA

Gene position: 828628-829236 (Clockwise)

Preceding gene: 28210498

Following gene: 28210503

Centisome position: 29.6

GC content: 23.97

Gene sequence:

>609_bases
GTGAGTATTATGAAAGGAAAAGAAATACTAAAAATATTTAATATCATAAAGAACTTAGAGGATAAAGAATATATGTTTTC
TATATTAGCTTATAATATTGCACCTAGCATTTTAAAAAATAAACCCTCCACTATTGTAAATTTATCTAAAAATAATAGAA
ATCTATATGCATTATGGGATAAGTATGGAGAAGAATTTCAAAGATATTTCTCAGTGGAAACTTACTCACTTAAAGATACA
AATGATTTTAAATTAAAATTATTTTATAGGAAAGAATCTTTAGAAAATCATTTACATAAAAAAGAAAATATCAATTTTCT
ACAAAAGATTGGATATAATGAAAGTAAAGATATAGAAGGATATTTAGATATGCTAAAAATTAGATATGAAAGTGAGTGTC
CACACGAGCTTGGGGTATTTTTAGGAATTCCACTAGAGGATATAGAGGGATTTATAGATAATTCTACAGAGGATTATTTA
TTAACTGGATATTGGAAGGTTTATAACAATGTGGAAGAAGCTAAAAAGACCTTTGAAGAATATGATAAAGCTAGATTAAA
TATATTAAATTCTATTTACAAAAAACAAGAAAAAACCTTTTTAAATTAA

Upstream 100 bases:

>100_bases
TCTCTCTTTAATAAAAGAGGGACTTTTTATCGTATAGAAAGGTTTTTTAATATACATACTATAAATATATTGTGGATTTA
GTAAAATATTATTTTAAAAG

Downstream 100 bases:

>100_bases
GGTTTTTTATAAAAAAAATTATCATCATTAAAATTGTCAGTATTCAAACCATTATTATCAAGAAAACTTTTACTTATAGG
AATTATATGAGGTTTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSIMKGKEILKIFNIIKNLEDKEYMFSILAYNIAPSILKNKPSTIVNLSKNNRNLYALWDKYGEEFQRYFSVETYSLKDT
NDFKLKLFYRKESLENHLHKKENINFLQKIGYNESKDIEGYLDMLKIRYESECPHELGVFLGIPLEDIEGFIDNSTEDYL
LTGYWKVYNNVEEAKKTFEEYDKARLNILNSIYKKQEKTFLN

Sequences:

>Translated_202_residues
MSIMKGKEILKIFNIIKNLEDKEYMFSILAYNIAPSILKNKPSTIVNLSKNNRNLYALWDKYGEEFQRYFSVETYSLKDT
NDFKLKLFYRKESLENHLHKKENINFLQKIGYNESKDIEGYLDMLKIRYESECPHELGVFLGIPLEDIEGFIDNSTEDYL
LTGYWKVYNNVEEAKKTFEEYDKARLNILNSIYKKQEKTFLN
>Mature_201_residues
SIMKGKEILKIFNIIKNLEDKEYMFSILAYNIAPSILKNKPSTIVNLSKNNRNLYALWDKYGEEFQRYFSVETYSLKDTN
DFKLKLFYRKESLENHLHKKENINFLQKIGYNESKDIEGYLDMLKIRYESECPHELGVFLGIPLEDIEGFIDNSTEDYLL
TGYWKVYNNVEEAKKTFEEYDKARLNILNSIYKKQEKTFLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24114; Mature: 23983

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIMKGKEILKIFNIIKNLEDKEYMFSILAYNIAPSILKNKPSTIVNLSKNNRNLYALWD
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEHHH
KYGEEFQRYFSVETYSLKDTNDFKLKLFYRKESLENHLHKKENINFLQKIGYNESKDIEG
HHHHHHHHHHCCEEEECCCCCCEEEEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH
YLDMLKIRYESECPHELGVFLGIPLEDIEGFIDNSTEDYLLTGYWKVYNNVEEAKKTFEE
HHHHHHHHHCCCCCHHHHHEECCCHHHHHHHHCCCCCCEEEHHHHHHHCCHHHHHHHHHH
YDKARLNILNSIYKKQEKTFLN
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIMKGKEILKIFNIIKNLEDKEYMFSILAYNIAPSILKNKPSTIVNLSKNNRNLYALWD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEHHH
KYGEEFQRYFSVETYSLKDTNDFKLKLFYRKESLENHLHKKENINFLQKIGYNESKDIEG
HHHHHHHHHHCCEEEECCCCCCEEEEEEEEHHHHHHHHHHHHCCHHHHHCCCCCCCCHHH
YLDMLKIRYESECPHELGVFLGIPLEDIEGFIDNSTEDYLLTGYWKVYNNVEEAKKTFEE
HHHHHHHHHCCCCCHHHHHEECCCHHHHHHHHCCCCCCEEEHHHHHHHCCHHHHHHHHHH
YDKARLNILNSIYKKQEKTFLN
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA