| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210489
Identifier: 28210489
GI number: 28210489
Start: 810742
End: 811866
Strand: Direct
Name: 28210489
Synonym: CTC00771
Alternate gene names: NA
Gene position: 810742-811866 (Clockwise)
Preceding gene: 28210488
Following gene: 28210490
Centisome position: 28.96
GC content: 31.64
Gene sequence:
>1125_bases TTGATATATAAGGTAATTTATTTACCTTATATATCAAAGAAAAATTTTAAAGGTTCATGGAGGAATCTATATAAAATGAA CAAAAAAAAGAAGATAATAATAGCTTGTATAGCTATGTTAACTATAGCTGTGGGAGGATTATTTATTAAGAATTATAACA TGAAGGATCAATCCACAACTTTCACAAGGGTAGTTCAAGATGAAAATAAAAAGAATAATAAAAAAGAGAATAAAAAGGAA GAGCCTAAGAAAGAAGAAGTCAAAAAGAAAGACCAGGAGAAAAAGAAGGAAGAAGAAGAAAAGAAAAAGGAAGATAATAA AAAAGAAGAAAAAAAAGAGATAAAACAAAACCCTTTAGTTGAAGCAAAGAAGCCTTCATCAAATTCTTCCATTGATGGAA GTAAAAAGACAGTTTATATAAGGGTGGAAGGCTATGATAGAACTTTTGTACCGCGAACAAAGATAACTACAGGAGCTTTT GATTTAAACCCTTATTTAGGTCCAGCAACAGGTTCTTCAGCAACAGCTTCTAAAGGCTGGGGAATGGATAAATTTAAAGA ACCAACCAATGCCCATGCTATAGTTAAAGCTTTAGAAAGTAACGGATATAAGAAAGAAGTAGGTTACGACTTTCAAGATT ATGGCTGGGGTCTTTATATAGCTATGATAGGTGGAAATAGAGAGTTTGATTATAGAAGTACTTCAGGATGGATGTACAGA GTAAACAATGTACTTCCGAATGTAGGATGTCAAGGAACAGCTCTTAAAAATGGAGATGAAATACTATGGTATTTTGGAGC CTATGGTTTTGATACTTTAGCTACGGAATTAGAGGGGAATACTACCAATGTAAGTACAGGGCAAGATGTAACAGTAACCT TAAATGGTATAAAAAATGATATAAATACTTGGAAAGAATTTAGAGAACCAGTAAAGGGAGCAACTATATATGCTAATGGA AATCCTTTAAATATAGATGGTAGCAATATTCTCACAGATGGTGAAGGAAAGGCAACTATAAAATTTGATAAACCAGGTAC TTATACATTATCAGCAGAAAGAATTAACAATAAGAACTTAAGAGATATAGTAAGACCACGACCATTTACTATAACTGTTA AATAA
Upstream 100 bases:
>100_bases AAATTATATGATAGTGAAAATGGCAAATGGATATTGTTAAAATCAAAATTTGATGCAAAGACTAATAGAGTTATTGGACA AGTAAAATAACTTAATTAAT
Downstream 100 bases:
>100_bases TAAGATACTTACTATAGTAAAGGGGTTTTTATGAAATGAATAATAAAAAAAAGATAATAATAGCTTGTATAACTATATTA TCTATGTTTCTTTGTGGGAT
Product: putative surface/cell-adhesion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK
Sequences:
>Translated_374_residues MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK >Mature_374_residues MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42388; Mature: 42388
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTT CEEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCH FTRVVQDENKKNNKKENKKEEPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLV HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC EAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAFDLNPYLGPATGSSATASKGW CCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCEEEECEEECCCCCCCCCCCCCCCCCCC GMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR CCHHHCCCCCHHHHHHHHHCCCCCHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEE VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKND ECCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHH INTWKEFREPVKGATIYANGNPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNL HHHHHHHHHCCCCEEEEECCCEEEECCCCEEECCCCEEEEEECCCCCEEEEHHHCCCCCH RDIVRPRPFTITVK HHHHCCCCEEEEEC >Mature Secondary Structure MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTT CEEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCH FTRVVQDENKKNNKKENKKEEPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLV HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC EAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAFDLNPYLGPATGSSATASKGW CCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCEEEECEEECCCCCCCCCCCCCCCCCCC GMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR CCHHHCCCCCHHHHHHHHHCCCCCHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEE VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKND ECCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHH INTWKEFREPVKGATIYANGNPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNL HHHHHHHHHCCCCEEEEECCCEEEECCCCEEECCCCEEEEEECCCCCEEEEHHHCCCCCH RDIVRPRPFTITVK HHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA