Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210488

Identifier: 28210488

GI number: 28210488

Start: 808662

End: 810473

Strand: Direct

Name: 28210488

Synonym: CTC00770

Alternate gene names: NA

Gene position: 808662-810473 (Clockwise)

Preceding gene: 28210487

Following gene: 28210489

Centisome position: 28.89

GC content: 30.24

Gene sequence:

>1812_bases
ATGAAAAAGTTTTGGAAAAGTTTTATGGCTACATTACTTATAGTGATAAGCATGACTTGTACAGTTTTTGCAAAAGTGGA
TGTAAAAGTTAATGTAAGTGGAAATGATGTAATAATAAATGGTAGATCTAATCATACAGGTCAAAATGTTATGATACAAA
CATGGAGTGGAGATAAAAAATATTATATAGATGCAGATAAAACAGATAAAGAAGGTAGTTTCCAATTTAAGTTTAAAACA
GCTGATAATATGGACTATGATGGCAAGATAAATGTAGGAGGAGAATTACAAGATATTAAATTTTCTACCAAACATATAAA
ATTAAACAAAAATAATATAGAGTTAAAAGTAGGAGAAAGTGAAAAATTAATAGCTACTATAACGTCAGAAAGTAATACAA
ATAAAAAATTAATATGGAAGTCCTCTGATAAAAATATTGCTACAGTAGATACAGAAGGTGAAGTTAAAGCCATAAAAGAA
GGAAAAACTACAATAGAAGTAACAACAGAGGATGGTGCTAAAAAAGATACATGTATTGTAAATGTAGTAAAGAGTTCTGG
TGGTAGTAGCGGTGGCGGTGGTGGTACACCGTCAAAACCAGATGGTAATGAAGTTAAAGTATTTATTAGAGTAGAAGGAT
ATGACAGAACTGTAGTTCCTAGAACAGAAGTAAAAGTAAAATTATTTAATTTAAATTCCTATTTAGGTAAAGCTACAGGT
TCTTCAGCTGAACCTTCAAAAGGATGGAATGTAGATAAATTTGATAGACCAACTCATGCTCATGCCATAGTAAAACTATT
AAATGATAAACACATAAAATATGATTTTCAAGATTATGGATGGAGCATATATATGGCAGAAATAGCCGGGGACAGGGAAT
TTGATCATAGACCTACCTCAGGTTGGATGTACAGTGTAAATGGTAAACTTCCTGCTGTTGGAAGTAATGGACTACCAGTA
AGAGATGGAGACGAAGTAGTATGGTTCTTTGGAGCATATGGATTTGACACTATAGTTACTACTTTAGAATCAAATAAAAC
TAAAGTAAAAGCGGGAGAAGAAATAGAAGTACAGTTAGATGGTTTCAGCACAGTAGGTGCTAATGGAGAAGGTCAAGTTG
ATGATTATGGACAGATAAAAGAACCAGTAAATGAAGCTACTATATTGGTAAATGGACAAGAATATAAATTAGATGGAAAA
GTTGTAAAAACGGATAGTAATGGTAAAGCTAAATTAAAATTTGATAAGGATGGAATTTATAAAATTTCAGCAATTAGATA
TAAAAAAGATCAAGGTAAGAAAATAGATATAGTAAGACCTCAACCATTAGAAATAAAGGTAGGAGAAGGAAAATCTTCAG
GCGGTGGCGGTAGTAGTGCTGCTGTAAAGGAAGAACAAAAACAAGAAGCTTTAAAGGAATTAGAGGAAAGACTTAAAAAA
GTTTCAATAAAAGATAATGAGCTTAATGTAAAAAAAGAAGAAGAAAAAACTATAGTATCTGCGGGAGAATATGTACTTTA
TTCAGCTATAAAAGAAGCAGAAGGAATAATTAGAGAAATAAATGAAAGATATAAAGATATAGAGTTAGGAGAAGATGTAA
ATATAATTCCTATAGATACAAGCAAAATAACAGGTGAAAATATTGCATTTAGATTAGAAGATAATTCAATTAAAGCTTTA
AATGATAAAGGATTTGGAGTGAAAATTGTATTTGATAATATAGAAGTTAAAGTTCCAAACAAGATAATATCTCAAGAAAG
AAGTGGAAAAGAGCTAGAAATAAGAAAAAGCAATGTATCTAAAGATGTATAG

Upstream 100 bases:

>100_bases
CAATTAAAATAGAAGTAGAGTAGTTAAAACTCAATAAAAAATATTGTAGTATTAAGGGGATTTAATACTACAATATATCT
TAAAATAAGGAGAGAAAGAT

Downstream 100 bases:

>100_bases
AATAAAATAGTAAATAGTTTAAATGATAAAGTACTATTACCTTCATATAGTGTGTCTTTATATGAAGTAGGAAGTAGTGA
AAAGAAAATTAGTATGAAGG

Product: surface/cell-adhesion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MKKFWKSFMATLLIVISMTCTVFAKVDVKVNVSGNDVIINGRSNHTGQNVMIQTWSGDKKYYIDADKTDKEGSFQFKFKT
ADNMDYDGKINVGGELQDIKFSTKHIKLNKNNIELKVGESEKLIATITSESNTNKKLIWKSSDKNIATVDTEGEVKAIKE
GKTTIEVTTEDGAKKDTCIVNVVKSSGGSSGGGGGTPSKPDGNEVKVFIRVEGYDRTVVPRTEVKVKLFNLNSYLGKATG
SSAEPSKGWNVDKFDRPTHAHAIVKLLNDKHIKYDFQDYGWSIYMAEIAGDREFDHRPTSGWMYSVNGKLPAVGSNGLPV
RDGDEVVWFFGAYGFDTIVTTLESNKTKVKAGEEIEVQLDGFSTVGANGEGQVDDYGQIKEPVNEATILVNGQEYKLDGK
VVKTDSNGKAKLKFDKDGIYKISAIRYKKDQGKKIDIVRPQPLEIKVGEGKSSGGGGSSAAVKEEQKQEALKELEERLKK
VSIKDNELNVKKEEEKTIVSAGEYVLYSAIKEAEGIIREINERYKDIELGEDVNIIPIDTSKITGENIAFRLEDNSIKAL
NDKGFGVKIVFDNIEVKVPNKIISQERSGKELEIRKSNVSKDV

Sequences:

>Translated_603_residues
MKKFWKSFMATLLIVISMTCTVFAKVDVKVNVSGNDVIINGRSNHTGQNVMIQTWSGDKKYYIDADKTDKEGSFQFKFKT
ADNMDYDGKINVGGELQDIKFSTKHIKLNKNNIELKVGESEKLIATITSESNTNKKLIWKSSDKNIATVDTEGEVKAIKE
GKTTIEVTTEDGAKKDTCIVNVVKSSGGSSGGGGGTPSKPDGNEVKVFIRVEGYDRTVVPRTEVKVKLFNLNSYLGKATG
SSAEPSKGWNVDKFDRPTHAHAIVKLLNDKHIKYDFQDYGWSIYMAEIAGDREFDHRPTSGWMYSVNGKLPAVGSNGLPV
RDGDEVVWFFGAYGFDTIVTTLESNKTKVKAGEEIEVQLDGFSTVGANGEGQVDDYGQIKEPVNEATILVNGQEYKLDGK
VVKTDSNGKAKLKFDKDGIYKISAIRYKKDQGKKIDIVRPQPLEIKVGEGKSSGGGGSSAAVKEEQKQEALKELEERLKK
VSIKDNELNVKKEEEKTIVSAGEYVLYSAIKEAEGIIREINERYKDIELGEDVNIIPIDTSKITGENIAFRLEDNSIKAL
NDKGFGVKIVFDNIEVKVPNKIISQERSGKELEIRKSNVSKDV
>Mature_603_residues
MKKFWKSFMATLLIVISMTCTVFAKVDVKVNVSGNDVIINGRSNHTGQNVMIQTWSGDKKYYIDADKTDKEGSFQFKFKT
ADNMDYDGKINVGGELQDIKFSTKHIKLNKNNIELKVGESEKLIATITSESNTNKKLIWKSSDKNIATVDTEGEVKAIKE
GKTTIEVTTEDGAKKDTCIVNVVKSSGGSSGGGGGTPSKPDGNEVKVFIRVEGYDRTVVPRTEVKVKLFNLNSYLGKATG
SSAEPSKGWNVDKFDRPTHAHAIVKLLNDKHIKYDFQDYGWSIYMAEIAGDREFDHRPTSGWMYSVNGKLPAVGSNGLPV
RDGDEVVWFFGAYGFDTIVTTLESNKTKVKAGEEIEVQLDGFSTVGANGEGQVDDYGQIKEPVNEATILVNGQEYKLDGK
VVKTDSNGKAKLKFDKDGIYKISAIRYKKDQGKKIDIVRPQPLEIKVGEGKSSGGGGSSAAVKEEQKQEALKELEERLKK
VSIKDNELNVKKEEEKTIVSAGEYVLYSAIKEAEGIIREINERYKDIELGEDVNIIPIDTSKITGENIAFRLEDNSIKAL
NDKGFGVKIVFDNIEVKVPNKIISQERSGKELEIRKSNVSKDV

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003343
- InterPro:   IPR008985
- InterPro:   IPR008964 [H]

Pfam domain/function: PF02368 Big_2 [H]

EC number: NA

Molecular weight: Translated: 66655; Mature: 66655

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFWKSFMATLLIVISMTCTVFAKVDVKVNVSGNDVIINGRSNHTGQNVMIQTWSGDKK
CHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCCEE
YYIDADKTDKEGSFQFKFKTADNMDYDGKINVGGELQDIKFSTKHIKLNKNNIELKVGES
EEEECCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEEEEEEEEECCEEEEEECCC
EKLIATITSESNTNKKLIWKSSDKNIATVDTEGEVKAIKEGKTTIEVTTEDGAKKDTCIV
CEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCEEEE
NVVKSSGGSSGGGGGTPSKPDGNEVKVFIRVEGYDRTVVPRTEVKVKLFNLNSYLGKATG
EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEEECCHHHCCCCC
SSAEPSKGWNVDKFDRPTHAHAIVKLLNDKHIKYDFQDYGWSIYMAEIAGDREFDHRPTS
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHCCEEEEEEEECCCCCCCCCCCC
GWMYSVNGKLPAVGSNGLPVRDGDEVVWFFGAYGFDTIVTTLESNKTKVKAGEEIEVQLD
CEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEECCCEEEEEEC
GFSTVGANGEGQVDDYGQIKEPVNEATILVNGQEYKLDGKVVKTDSNGKAKLKFDKDGIY
CEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCEEEECCEEEEECCCCEEEEEECCCCCE
KISAIRYKKDQGKKIDIVRPQPLEIKVGEGKSSGGGGSSAAVKEEQKQEALKELEERLKK
EEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSIKDNELNVKKEEEKTIVSAGEYVLYSAIKEAEGIIREINERYKDIELGEDVNIIPIDT
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
SKITGENIAFRLEDNSIKALNDKGFGVKIVFDNIEVKVPNKIISQERSGKELEIRKSNVS
CEECCCCEEEEEECCCEEEECCCCCEEEEEEECEEEECCHHHHCCCCCCCEEEEEECCCC
KDV
CCC
>Mature Secondary Structure
MKKFWKSFMATLLIVISMTCTVFAKVDVKVNVSGNDVIINGRSNHTGQNVMIQTWSGDKK
CHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEECCCEE
YYIDADKTDKEGSFQFKFKTADNMDYDGKINVGGELQDIKFSTKHIKLNKNNIELKVGES
EEEECCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEEEEEEEEECCEEEEEECCC
EKLIATITSESNTNKKLIWKSSDKNIATVDTEGEVKAIKEGKTTIEVTTEDGAKKDTCIV
CEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCCCEEEE
NVVKSSGGSSGGGGGTPSKPDGNEVKVFIRVEGYDRTVVPRTEVKVKLFNLNSYLGKATG
EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEEECCHHHCCCCC
SSAEPSKGWNVDKFDRPTHAHAIVKLLNDKHIKYDFQDYGWSIYMAEIAGDREFDHRPTS
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHCCEEEEEEEECCCCCCCCCCCC
GWMYSVNGKLPAVGSNGLPVRDGDEVVWFFGAYGFDTIVTTLESNKTKVKAGEEIEVQLD
CEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEECCCEEEEEEC
GFSTVGANGEGQVDDYGQIKEPVNEATILVNGQEYKLDGKVVKTDSNGKAKLKFDKDGIY
CEEEECCCCCCCCCCCHHHHCCCCCEEEEECCCEEEECCEEEEECCCCEEEEEECCCCCE
KISAIRYKKDQGKKIDIVRPQPLEIKVGEGKSSGGGGSSAAVKEEQKQEALKELEERLKK
EEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VSIKDNELNVKKEEEKTIVSAGEYVLYSAIKEAEGIIREINERYKDIELGEDVNIIPIDT
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
SKITGENIAFRLEDNSIKALNDKGFGVKIVFDNIEVKVPNKIISQERSGKELEIRKSNVS
CEECCCCEEEEEECCCEEEECCCCCEEEEEEECEEEECCHHHHCCCCCCCEEEEEECCCC
KDV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286; 1916274 [H]