Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210480

Identifier: 28210480

GI number: 28210480

Start: 797026

End: 797754

Strand: Direct

Name: 28210480

Synonym: CTC00760

Alternate gene names: NA

Gene position: 797026-797754 (Clockwise)

Preceding gene: 28210479

Following gene: 28210481

Centisome position: 28.47

GC content: 21.26

Gene sequence:

>729_bases
ATGAAAAAAAATTTAAAAAATATATACATAGATGATGGATTTATAATGTTAACTTATATTTTTATGAATATATTAGCTTT
ATTAGCTTATTTGTTTATGGTGCCTTTTAGAGTAGAGGGAATTAATTTTGAAATATATAAAAATACGTATATGTATTTTT
ATATATTTCAGTTAATTGTATTTTCTTTTTCTATAGTCCATTTTAAAGTAGAAAAAAATATAAGTTTCGAAAATTTATTG
GGAAATATTATTAAAACAATAATACTTGTTATTTCTAACATACCCTTAATATTAATTATATTTATATCTGGTAATGTAGA
AAGTTTAAATTTTACTTATCCTTTAATTTTACAAACTATTTATGGACTTGCCATAATTAGTTTTAAACATTTATTAAATA
TTATTGATATAACAGAAAAGTATTCAAGCTTTATAGTTAACTTTAGCGTAACTTTTATAAATATATTCAGCTTTGCTTTT
TTATATATTTACTATAAGTATGCTCAAATAGTTATAACTACCATATATGATAAAGATATACCTAAGATATTTTTTATAAA
CCCTTTAATGAGTATATCAGGGTTTATAAATATGGAGATAACAGAGTATACTCAAATGGGTATAACCCCTATAATATGGG
GAATTTGTTTTTGGACAATATGTGCACTTATAAATTTAGTAGTTATAAAAAAAATAGGAGGCCATAGTATTGGAATGGAA
AACAATTGA

Upstream 100 bases:

>100_bases
CTTACATGGAAAGGTTTTAAATTTAAGAGTAAAAGGAAAAGGAAGATTAATAATTCCTAGTATATATGTAAAAGGAGCTT
TAAACTAAGGTGGGATATTT

Downstream 100 bases:

>100_bases
ACAGATTTTAAAAAAAATATTAAGAAAGCTATGGCTTGAACGATTACTAAAAAATTTAATTAATGTATTATTAATGTCTT
CTATAGGTATTTTTGTATTA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKNLKNIYIDDGFIMLTYIFMNILALLAYLFMVPFRVEGINFEIYKNTYMYFYIFQLIVFSFSIVHFKVEKNISFENLL
GNIIKTIILVISNIPLILIIFISGNVESLNFTYPLILQTIYGLAIISFKHLLNIIDITEKYSSFIVNFSVTFINIFSFAF
LYIYYKYAQIVITTIYDKDIPKIFFINPLMSISGFINMEITEYTQMGITPIIWGICFWTICALINLVVIKKIGGHSIGME
NN

Sequences:

>Translated_242_residues
MKKNLKNIYIDDGFIMLTYIFMNILALLAYLFMVPFRVEGINFEIYKNTYMYFYIFQLIVFSFSIVHFKVEKNISFENLL
GNIIKTIILVISNIPLILIIFISGNVESLNFTYPLILQTIYGLAIISFKHLLNIIDITEKYSSFIVNFSVTFINIFSFAF
LYIYYKYAQIVITTIYDKDIPKIFFINPLMSISGFINMEITEYTQMGITPIIWGICFWTICALINLVVIKKIGGHSIGME
NN
>Mature_242_residues
MKKNLKNIYIDDGFIMLTYIFMNILALLAYLFMVPFRVEGINFEIYKNTYMYFYIFQLIVFSFSIVHFKVEKNISFENLL
GNIIKTIILVISNIPLILIIFISGNVESLNFTYPLILQTIYGLAIISFKHLLNIIDITEKYSSFIVNFSVTFINIFSFAF
LYIYYKYAQIVITTIYDKDIPKIFFINPLMSISGFINMEITEYTQMGITPIIWGICFWTICALINLVVIKKIGGHSIGME
NN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28208; Mature: 28208

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLKNIYIDDGFIMLTYIFMNILALLAYLFMVPFRVEGINFEIYKNTYMYFYIFQLIV
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEECHHHHHHHHHHHH
FSFSIVHFKVEKNISFENLLGNIIKTIILVISNIPLILIIFISGNVESLNFTYPLILQTI
HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEECCHHHHHHHHH
YGLAIISFKHLLNIIDITEKYSSFIVNFSVTFINIFSFAFLYIYYKYAQIVITTIYDKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PKIFFINPLMSISGFINMEITEYTQMGITPIIWGICFWTICALINLVVIKKIGGHSIGME
CEEEEECHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NN
CC
>Mature Secondary Structure
MKKNLKNIYIDDGFIMLTYIFMNILALLAYLFMVPFRVEGINFEIYKNTYMYFYIFQLIV
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEECHHHHHHHHHHHH
FSFSIVHFKVEKNISFENLLGNIIKTIILVISNIPLILIIFISGNVESLNFTYPLILQTI
HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEECCHHHHHHHHH
YGLAIISFKHLLNIIDITEKYSSFIVNFSVTFINIFSFAFLYIYYKYAQIVITTIYDKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PKIFFINPLMSISGFINMEITEYTQMGITPIIWGICFWTICALINLVVIKKIGGHSIGME
CEEEEECHHHHHCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA