Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210479

Identifier: 28210479

GI number: 28210479

Start: 794986

End: 797013

Strand: Direct

Name: 28210479

Synonym: CTC00759

Alternate gene names: NA

Gene position: 794986-797013 (Clockwise)

Preceding gene: 28210478

Following gene: 28210480

Centisome position: 28.4

GC content: 22.78

Gene sequence:

>2028_bases
ATGAAACTAAAATATAAAAAAATATGTATTTTTGTATTGTCATGTATAGTAAGTGTTTTAGCAAATTTCAATAATGTTTA
TGCTAAAGATTTAATTATTAATGCAAATAGCAACTTAGATAGTAAAGCTAAGCTAGGTAACGTAGTACCTATAGATATAA
ATATTGAATCAAAAGAAAATATAGAAGGAAAGTTATGTTTGTATATTTCAAAAGAGAAGTATGAACACCATATAAAAATT
TCTTCAGGAGTATCAAATAAATATACCTTTTTAGTACCAGTAAAAAATGGAGTAAAAGAAATGAAGATATCAGTAGAAGA
AAATAATAAGGTAGTTAAAGAAAAAAAAATTCCACTGACAGTACATGAATCCAATTCATTATTTATAGGAATTTTTAGTG
ATAGTGAAAATAACTATAACTATATGAAAAATTTGAAGGTAAATTCATTAGATATAAATAGTAGTGAAACTATTAGTTTA
AAAGATAAAGAATTAAGTTTTGAACTTTTAAAAAATTTGAATTTTATAATTTTAGACGATTTTAATTTTGAAAGTTTATC
AAATGATAGTAAAGATGCCTTGGATAAATGGCTAAAGCATGGTGGAATTATATTTATAGGAAAAGGAAAAAATGCTTACA
AGAATTTGAAAGGACCATTTGAAAATATAAAAAAAATAACATATGTAGATAAAGGGTCAATTATTCCTATAAATTTTGAG
TTAAGTGATAAAAACAATATGTCTAAAATTGATGAGATTATTACACAAAACATTAATAATGAAAATTTATACTCTTTAAC
AGCCAATATAGATTTAAAAAAAGAGGCTACTAAAGCCGAACAACTTAAAGGTTCTGCCAATAATATGCTTAAAGTAAATA
AGAATATAATTTATTTTCTAATGGCTGTTTTAATTGTTTATTTAGTATGTTTGACAACTATAGTTTTATTAAAAAAGAGT
AGCATGTACATATGGATAGGAATAATTATAATTTTTTCAATAGTAAGTTCTGTAGTATATTTCATTGAAGGAGCTGGAAA
TCAAAAAATAACAATGGCTTCGCTGAATGAATATTTTAATAAAAATTGTATTAGTAAATCATTAACTAATGTATATCCAA
GTAAAAAAGATGTGTCATTATCATCAGATAGTTGGCAATTTATGTCACAACAAGGAACAGGAAAATATACCTTGGATCCA
ATAGATAAAAAAATTATATATAAAAATCCTAAGGAAACCAATTATTTATACAATGTATCGTTACATAATTTAGAAAAACC
TATAAATAATAAATTAAAATTAGAAAATAATCATTTAAAAGGAGAAATAAAAAATCCGTTTCCTTATGAATTAAAAGATT
GTATTTTAATAGCTGGTGATAATTTAGTGAAAATAGGCAATATGAAGTCTGGAGAAGCTTTAGAGTTAAATTATGAATTA
GATAATAATTTAAAAGGAAGAGGTGATTACGAATACTTAAGTTCAATAGAAAAAGAAATATCAGATAAAGATAAACAAGA
ATTTCTAAAATACTATTTTAATTTACCTAATACAGAAAAGTTTAATTGTAGATTAATAGGCTTTAGTAATAGAAAGGTAT
ATGAGAAAATTAATAACAAAGAAAGAAAAATAAACTCTATAAATATGGAGATAGCACCAATAGAGATTGAATTATTATCA
AAAGAAATTAATATACCTTATGGATTTATAAAACCTATAATAAAAAAAGAAATAAAGGATAGTGAGAATGATATAAGAGA
ATACACTTTTAAGCAGAAGGAAAGTATAAATTTATACTATGTACTTCCTAAAAATGTGAAATTAAATGAAATCCAATTAA
GTGATTCTTTTAAAGATGGAAATTTTTATGTGGAGAGGTTTAACTATGAAACTAATAAATATGAGAAGTTAGATAAATTA
CTTTTAAATAATATAAAAGACTTACATGGAAAGGTTTTAAATTTAAGAGTAAAAGGAAAAGGAAGATTAATAATTCCTAG
TATATATGTAAAAGGAGCTTTAAACTAA

Upstream 100 bases:

>100_bases
AAAAAATCAGAGAGTATAAAAAGTTATTTTGGAGCAGTAGTAGCAGAGGAAAATATTATATCAGTGCCATTTATTCAATA
GTTATTTAGGATGTGAAAAT

Downstream 100 bases:

>100_bases
GGTGGGATATTTATGAAAAAAAATTTAAAAAATATATACATAGATGATGGATTTATAATGTTAACTTATATTTTTATGAA
TATATTAGCTTTATTAGCTT

Product: membrane-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 675; Mature: 675

Protein sequence:

>675_residues
MKLKYKKICIFVLSCIVSVLANFNNVYAKDLIINANSNLDSKAKLGNVVPIDINIESKENIEGKLCLYISKEKYEHHIKI
SSGVSNKYTFLVPVKNGVKEMKISVEENNKVVKEKKIPLTVHESNSLFIGIFSDSENNYNYMKNLKVNSLDINSSETISL
KDKELSFELLKNLNFIILDDFNFESLSNDSKDALDKWLKHGGIIFIGKGKNAYKNLKGPFENIKKITYVDKGSIIPINFE
LSDKNNMSKIDEIITQNINNENLYSLTANIDLKKEATKAEQLKGSANNMLKVNKNIIYFLMAVLIVYLVCLTTIVLLKKS
SMYIWIGIIIIFSIVSSVVYFIEGAGNQKITMASLNEYFNKNCISKSLTNVYPSKKDVSLSSDSWQFMSQQGTGKYTLDP
IDKKIIYKNPKETNYLYNVSLHNLEKPINNKLKLENNHLKGEIKNPFPYELKDCILIAGDNLVKIGNMKSGEALELNYEL
DNNLKGRGDYEYLSSIEKEISDKDKQEFLKYYFNLPNTEKFNCRLIGFSNRKVYEKINNKERKINSINMEIAPIEIELLS
KEINIPYGFIKPIIKKEIKDSENDIREYTFKQKESINLYYVLPKNVKLNEIQLSDSFKDGNFYVERFNYETNKYEKLDKL
LLNNIKDLHGKVLNLRVKGKGRLIIPSIYVKGALN

Sequences:

>Translated_675_residues
MKLKYKKICIFVLSCIVSVLANFNNVYAKDLIINANSNLDSKAKLGNVVPIDINIESKENIEGKLCLYISKEKYEHHIKI
SSGVSNKYTFLVPVKNGVKEMKISVEENNKVVKEKKIPLTVHESNSLFIGIFSDSENNYNYMKNLKVNSLDINSSETISL
KDKELSFELLKNLNFIILDDFNFESLSNDSKDALDKWLKHGGIIFIGKGKNAYKNLKGPFENIKKITYVDKGSIIPINFE
LSDKNNMSKIDEIITQNINNENLYSLTANIDLKKEATKAEQLKGSANNMLKVNKNIIYFLMAVLIVYLVCLTTIVLLKKS
SMYIWIGIIIIFSIVSSVVYFIEGAGNQKITMASLNEYFNKNCISKSLTNVYPSKKDVSLSSDSWQFMSQQGTGKYTLDP
IDKKIIYKNPKETNYLYNVSLHNLEKPINNKLKLENNHLKGEIKNPFPYELKDCILIAGDNLVKIGNMKSGEALELNYEL
DNNLKGRGDYEYLSSIEKEISDKDKQEFLKYYFNLPNTEKFNCRLIGFSNRKVYEKINNKERKINSINMEIAPIEIELLS
KEINIPYGFIKPIIKKEIKDSENDIREYTFKQKESINLYYVLPKNVKLNEIQLSDSFKDGNFYVERFNYETNKYEKLDKL
LLNNIKDLHGKVLNLRVKGKGRLIIPSIYVKGALN
>Mature_675_residues
MKLKYKKICIFVLSCIVSVLANFNNVYAKDLIINANSNLDSKAKLGNVVPIDINIESKENIEGKLCLYISKEKYEHHIKI
SSGVSNKYTFLVPVKNGVKEMKISVEENNKVVKEKKIPLTVHESNSLFIGIFSDSENNYNYMKNLKVNSLDINSSETISL
KDKELSFELLKNLNFIILDDFNFESLSNDSKDALDKWLKHGGIIFIGKGKNAYKNLKGPFENIKKITYVDKGSIIPINFE
LSDKNNMSKIDEIITQNINNENLYSLTANIDLKKEATKAEQLKGSANNMLKVNKNIIYFLMAVLIVYLVCLTTIVLLKKS
SMYIWIGIIIIFSIVSSVVYFIEGAGNQKITMASLNEYFNKNCISKSLTNVYPSKKDVSLSSDSWQFMSQQGTGKYTLDP
IDKKIIYKNPKETNYLYNVSLHNLEKPINNKLKLENNHLKGEIKNPFPYELKDCILIAGDNLVKIGNMKSGEALELNYEL
DNNLKGRGDYEYLSSIEKEISDKDKQEFLKYYFNLPNTEKFNCRLIGFSNRKVYEKINNKERKINSINMEIAPIEIELLS
KEINIPYGFIKPIIKKEIKDSENDIREYTFKQKESINLYYVLPKNVKLNEIQLSDSFKDGNFYVERFNYETNKYEKLDKL
LLNNIKDLHGKVLNLRVKGKGRLIIPSIYVKGALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77587; Mature: 77587

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKYKKICIFVLSCIVSVLANFNNVYAKDLIINANSNLDSKAKLGNVVPIDINIESKEN
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCCEEEEEEEECCCCC
IEGKLCLYISKEKYEHHIKISSGVSNKYTFLVPVKNGVKEMKISVEENNKVVKEKKIPLT
CCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCEEE
VHESNSLFIGIFSDSENNYNYMKNLKVNSLDINSSETISLKDKELSFELLKNLNFIILDD
EECCCCEEEEEEECCCCCCCEEHEEEEEEEECCCCCEEEEECCHHHHHHHHCCCEEEEEC
FNFESLSNDSKDALDKWLKHGGIIFIGKGKNAYKNLKGPFENIKKITYVDKGSIIPINFE
CCCHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHCCEEEEECCCCEEEEEEE
LSDKNNMSKIDEIITQNINNENLYSLTANIDLKKEATKAEQLKGSANNMLKVNKNIIYFL
ECCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHCCCCCCEEEECCHHHHHH
MAVLIVYLVCLTTIVLLKKSSMYIWIGIIIIFSIVSSVVYFIEGAGNQKITMASLNEYFN
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
KNCISKSLTNVYPSKKDVSLSSDSWQFMSQQGTGKYTLDPIDKKIIYKNPKETNYLYNVS
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEE
LHNLEKPINNKLKLENNHLKGEIKNPFPYELKDCILIAGDNLVKIGNMKSGEALELNYEL
HHHCCCCCCCCEEEECCCCCCEECCCCCCCCCCEEEEECCCEEEECCCCCCCEEEEEEEE
DNNLKGRGDYEYLSSIEKEISDKDKQEFLKYYFNLPNTEKFNCRLIGFSNRKVYEKINNK
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCH
ERKINSINMEIAPIEIELLSKEINIPYGFIKPIIKKEIKDSENDIREYTFKQKESINLYY
HHEEEEECEEEEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEE
VLPKNVKLNEIQLSDSFKDGNFYVERFNYETNKYEKLDKLLLNNIKDLHGKVLNLRVKGK
EECCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
GRLIIPSIYVKGALN
CCEEEEEEEEEECCC
>Mature Secondary Structure
MKLKYKKICIFVLSCIVSVLANFNNVYAKDLIINANSNLDSKAKLGNVVPIDINIESKEN
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCCEEEEEEEECCCCC
IEGKLCLYISKEKYEHHIKISSGVSNKYTFLVPVKNGVKEMKISVEENNKVVKEKKIPLT
CCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCEEE
VHESNSLFIGIFSDSENNYNYMKNLKVNSLDINSSETISLKDKELSFELLKNLNFIILDD
EECCCCEEEEEEECCCCCCCEEHEEEEEEEECCCCCEEEEECCHHHHHHHHCCCEEEEEC
FNFESLSNDSKDALDKWLKHGGIIFIGKGKNAYKNLKGPFENIKKITYVDKGSIIPINFE
CCCHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHCCCCHHHCCEEEEECCCCEEEEEEE
LSDKNNMSKIDEIITQNINNENLYSLTANIDLKKEATKAEQLKGSANNMLKVNKNIIYFL
ECCCCCHHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHCCCCCCEEEECCHHHHHH
MAVLIVYLVCLTTIVLLKKSSMYIWIGIIIIFSIVSSVVYFIEGAGNQKITMASLNEYFN
HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH
KNCISKSLTNVYPSKKDVSLSSDSWQFMSQQGTGKYTLDPIDKKIIYKNPKETNYLYNVS
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCEEEECCCCCCCEEEEEE
LHNLEKPINNKLKLENNHLKGEIKNPFPYELKDCILIAGDNLVKIGNMKSGEALELNYEL
HHHCCCCCCCCEEEECCCCCCEECCCCCCCCCCEEEEECCCEEEECCCCCCCEEEEEEEE
DNNLKGRGDYEYLSSIEKEISDKDKQEFLKYYFNLPNTEKFNCRLIGFSNRKVYEKINNK
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHCCH
ERKINSINMEIAPIEIELLSKEINIPYGFIKPIIKKEIKDSENDIREYTFKQKESINLYY
HHEEEEECEEEEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEE
VLPKNVKLNEIQLSDSFKDGNFYVERFNYETNKYEKLDKLLLNNIKDLHGKVLNLRVKGK
EECCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
GRLIIPSIYVKGALN
CCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA