| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is ywrA [H]
Identifier: 28210386
GI number: 28210386
Start: 679173
End: 679718
Strand: Direct
Name: ywrA [H]
Synonym: CTC00660
Alternate gene names: 28210386
Gene position: 679173-679718 (Clockwise)
Preceding gene: 28210383
Following gene: 28210387
Centisome position: 24.26
GC content: 29.3
Gene sequence:
>546_bases ATGGAGGAAAATATGAAAAAATTATTAACTATGTTTTGGAGCTTTTTTAAAATAGGAGCCTTTACTTTCGGAGGGGGCTA TGCTATGGTTCCTTTAATAGAAGTAGAAGTAGTTGACAAAAAGAAATGGATAGATAAAGAAGAATTTTTAGATACTTTAG TTATAGCTCAATCTTTTCCAGGAGCATTAGCTGTAAACACTTCAATTTTTATAGGATATAGGATAGGTGGAGCAGTAGGA GCTATTATGGCACTTTTAGGTACAGTACTTCCATCATTTTTTATAATTATATTTATAGCTTCTTTTTTTATGCAGTTTAG AAATAATTATTATGTAGATTTAGCATTTAAGGGCATTTCAGCGGCAGTTCCAGTACTCGTTTTAATAGCTGTAGTAAGTT TATCTAAATCCATTAAGAAAAATTATAGAAATGCTATATTAATTATTATAACTATAGTACTCATAAGCTTTTTTAATATA CATCCTGTTATAGTAATATTGGCTTCTGGTATTTATGGAGTTATTTACTATAGGGAAAGGGTGTGA
Upstream 100 bases:
>100_bases GATTCTTCAATATATGTAAATAAATGTATTTTAATTTATATGATAAAATGCTATTATAATGTAATACTAGATTATAATAG AAACAAATTCACACAAATTT
Downstream 100 bases:
>100_bases TGAGAATGAAAACCTTAGTATTATTATTTTGGTCTTTTTTAAAGATAGGAGCCTTTAGTTTTGGAGGGGGCTATGCTATG CTTCCTTTAATAGAAAGAGA
Product: chromate transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MEENMKKLLTMFWSFFKIGAFTFGGGYAMVPLIEVEVVDKKKWIDKEEFLDTLVIAQSFPGALAVNTSIFIGYRIGGAVG AIMALLGTVLPSFFIIIFIASFFMQFRNNYYVDLAFKGISAAVPVLVLIAVVSLSKSIKKNYRNAILIIITIVLISFFNI HPVIVILASGIYGVIYYRERV
Sequences:
>Translated_181_residues MEENMKKLLTMFWSFFKIGAFTFGGGYAMVPLIEVEVVDKKKWIDKEEFLDTLVIAQSFPGALAVNTSIFIGYRIGGAVG AIMALLGTVLPSFFIIIFIASFFMQFRNNYYVDLAFKGISAAVPVLVLIAVVSLSKSIKKNYRNAILIIITIVLISFFNI HPVIVILASGIYGVIYYRERV >Mature_181_residues MEENMKKLLTMFWSFFKIGAFTFGGGYAMVPLIEVEVVDKKKWIDKEEFLDTLVIAQSFPGALAVNTSIFIGYRIGGAVG AIMALLGTVLPSFFIIIFIASFFMQFRNNYYVDLAFKGISAAVPVLVLIAVVSLSKSIKKNYRNAILIIITIVLISFFNI HPVIVILASGIYGVIYYRERV
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20227; Mature: 20227
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENMKKLLTMFWSFFKIGAFTFGGGYAMVPLIEVEVVDKKKWIDKEEFLDTLVIAQSFP CCHHHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEEECHHHCCCHHHHHHHHHHHHCCC GALAVNTSIFIGYRIGGAVGAIMALLGTVLPSFFIIIFIASFFMQFRNNYYVDLAFKGIS CCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHH AAVPVLVLIAVVSLSKSIKKNYRNAILIIITIVLISFFNIHPVIVILASGIYGVIYYRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECC V C >Mature Secondary Structure MEENMKKLLTMFWSFFKIGAFTFGGGYAMVPLIEVEVVDKKKWIDKEEFLDTLVIAQSFP CCHHHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEEECHHHCCCHHHHHHHHHHHHCCC GALAVNTSIFIGYRIGGAVGAIMALLGTVLPSFFIIIFIASFFMQFRNNYYVDLAFKGIS CCEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHH AAVPVLVLIAVVSLSKSIKKNYRNAILIIITIVLISFFNIHPVIVILASGIYGVIYYRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEECC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]