Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is srpC [H]

Identifier: 28210387

GI number: 28210387

Start: 679715

End: 680254

Strand: Direct

Name: srpC [H]

Synonym: CTC00661

Alternate gene names: 28210387

Gene position: 679715-680254 (Clockwise)

Preceding gene: 28210386

Following gene: 28210388

Centisome position: 24.28

GC content: 29.44

Gene sequence:

>540_bases
GTGATGAGAATGAAAACCTTAGTATTATTATTTTGGTCTTTTTTAAAGATAGGAGCCTTTAGTTTTGGAGGGGGCTATGC
TATGCTTCCTTTAATAGAAAGAGAAATTGTAAATAATAGATCATGGATTAGCTTTCAGGAATTTAGTGATATAATAGGTA
TTTCTCAAATGACTCCAGGACCTATAGCTATAAATTCTGCAACCTTTGTAGGATATAAAATAGCAGGAGTTTGGGGAAGT
GTAGCTGCAACTTTAGGAGTGGTTACTGTATCTTTTATACTGGTTTTTATAGCTTCTCATTATTTGATTAAATTTAAAGA
ATCTAAAATAATGAAATCTGCATTACTTGGCATGAGACCAGCTTTAATAGGACTTATAGTATCTGCCTTTTTATCCCTTT
CAAAAGGTGTTTATCATGATATAAAAAGTATTATAATAGCCATTATAATATTAACTTTATTACTGTGGGATAAAATACAT
CCAATAATAGTAATAATTATATCTGCAGTGCTTGGAATAATTTTCTATGGATATTTTTAA

Upstream 100 bases:

>100_bases
TTATTATAACTATAGTACTCATAAGCTTTTTTAATATACATCCTGTTATAGTAATATTGGCTTCTGGTATTTATGGAGTT
ATTTACTATAGGGAAAGGGT

Downstream 100 bases:

>100_bases
AACACCATTGTAAGGAAATAATCACTATGTTATAATTTACTATATAAAGGGGAGTAGCAAATTAATTTAACTATTCGTCA
TTACGGCAATTAAAGCCCGG

Product: chromate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MMRMKTLVLLFWSFLKIGAFSFGGGYAMLPLIEREIVNNRSWISFQEFSDIIGISQMTPGPIAINSATFVGYKIAGVWGS
VAATLGVVTVSFILVFIASHYLIKFKESKIMKSALLGMRPALIGLIVSAFLSLSKGVYHDIKSIIIAIIILTLLLWDKIH
PIIVIIISAVLGIIFYGYF

Sequences:

>Translated_179_residues
MMRMKTLVLLFWSFLKIGAFSFGGGYAMLPLIEREIVNNRSWISFQEFSDIIGISQMTPGPIAINSATFVGYKIAGVWGS
VAATLGVVTVSFILVFIASHYLIKFKESKIMKSALLGMRPALIGLIVSAFLSLSKGVYHDIKSIIIAIIILTLLLWDKIH
PIIVIIISAVLGIIFYGYF
>Mature_179_residues
MMRMKTLVLLFWSFLKIGAFSFGGGYAMLPLIEREIVNNRSWISFQEFSDIIGISQMTPGPIAINSATFVGYKIAGVWGS
VAATLGVVTVSFILVFIASHYLIKFKESKIMKSALLGMRPALIGLIVSAFLSLSKGVYHDIKSIIIAIIILTLLLWDKIH
PIIVIIISAVLGIIFYGYF

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 19764; Mature: 19764

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRMKTLVLLFWSFLKIGAFSFGGGYAMLPLIEREIVNNRSWISFQEFSDIIGISQMTPG
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PIAINSATFVGYKIAGVWGSVAATLGVVTVSFILVFIASHYLIKFKESKIMKSALLGMRP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ALIGLIVSAFLSLSKGVYHDIKSIIIAIIILTLLLWDKIHPIIVIIISAVLGIIFYGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRMKTLVLLFWSFLKIGAFSFGGGYAMLPLIEREIVNNRSWISFQEFSDIIGISQMTPG
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
PIAINSATFVGYKIAGVWGSVAATLGVVTVSFILVFIASHYLIKFKESKIMKSALLGMRP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ALIGLIVSAFLSLSKGVYHDIKSIIIAIIILTLLLWDKIHPIIVIIISAVLGIIFYGYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]