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The map label for this gene is ynhG [C]

Identifier: 28210382

GI number: 28210382

Start: 673015

End: 673713

Strand: Direct

Name: ynhG [C]

Synonym: CTC00656

Alternate gene names: 28210382

Gene position: 673015-673713 (Clockwise)

Preceding gene: 28210381

Following gene: 28210383

Centisome position: 24.04

GC content: 31.76

Gene sequence:

>699_bases
ATGAAAAGGCACAATAGAATTATTTCTACACTGCTTTTCTTAGTATTATTAATCTGCCCTAAAGTAGCAAAAGCTAGTGA
TTTAAATAGGAAATCAATTCAAAAAAATAAGGAAGGCTATAATATATTAGTTGATATTAGTGAATTTAAAATGTATTTAA
TAGAAAAAGGTAGTAATAAACCTATAAGAAGGTATCCTATAGCAGGAGGAAAACCAGAAACACCTTCACCATATGGTACT
TGGAAAATAACTTCAAAATCTGCCAATTGGGGTAGCGGGTTTGGAACAAGGTGGATGGGGCTAAATGTTCCCTGGGGTCA
ATATGGAATTCATGGAACAAATAAACCACTAAGTATAAACAATCCAGATTCTAAAGGATGTATTAGAATGTTTAATAAAG
ATGTAGAAGAACTATATAAATATGTAGATGTAGGTACAATAGTAGTTATTTATGGTGGACCATATAATCTTTCATGGAAT
AATTTTAGAACACTAAAACCTGGAGATAAAGGTGCAGATGTTTTAGAAGTGCAAAGGGTATTAAAATATAGAGGGTATTA
TGCAGGAAAGTTAGATGGTATCTATGGAGAGGGAATGAAATCCATAATCCTCAAGTTTAAGACAGATAATAATCTAAGCT
TTAGTCACTACATAGATGGAGAAATGTATAATAAATTGGGGATGCAACCCTTTGAGTAA

Upstream 100 bases:

>100_bases
GTCAGATTATGATAGGAGAATTGGAGGAAAACTGTATATATAGGTGAATATGCTTATATTTAGTTATAAAAATAATATTG
AAGTGGAGATGAAATAAAAA

Downstream 100 bases:

>100_bases
TGAACAAGTAACAATGAACAATTAATGAGGTTCTTCCTCCTAGGGTGGGAAGAACTTTAATTTTAATTGTTAATTATCAA
CTTGAATGGGTTATACTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKRHNRIISTLLFLVLLICPKVAKASDLNRKSIQKNKEGYNILVDISEFKMYLIEKGSNKPIRRYPIAGGKPETPSPYGT
WKITSKSANWGSGFGTRWMGLNVPWGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELYKYVDVGTIVVIYGGPYNLSWN
NFRTLKPGDKGADVLEVQRVLKYRGYYAGKLDGIYGEGMKSIILKFKTDNNLSFSHYIDGEMYNKLGMQPFE

Sequences:

>Translated_232_residues
MKRHNRIISTLLFLVLLICPKVAKASDLNRKSIQKNKEGYNILVDISEFKMYLIEKGSNKPIRRYPIAGGKPETPSPYGT
WKITSKSANWGSGFGTRWMGLNVPWGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELYKYVDVGTIVVIYGGPYNLSWN
NFRTLKPGDKGADVLEVQRVLKYRGYYAGKLDGIYGEGMKSIILKFKTDNNLSFSHYIDGEMYNKLGMQPFE
>Mature_232_residues
MKRHNRIISTLLFLVLLICPKVAKASDLNRKSIQKNKEGYNILVDISEFKMYLIEKGSNKPIRRYPIAGGKPETPSPYGT
WKITSKSANWGSGFGTRWMGLNVPWGQYGIHGTNKPLSINNPDSKGCIRMFNKDVEELYKYVDVGTIVVIYGGPYNLSWN
NFRTLKPGDKGADVLEVQRVLKYRGYYAGKLDGIYGEGMKSIILKFKTDNNLSFSHYIDGEMYNKLGMQPFE

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 26367; Mature: 26367

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRHNRIISTLLFLVLLICPKVAKASDLNRKSIQKNKEGYNILVDISEFKMYLIEKGSNK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHEEEEEECCCCC
PIRRYPIAGGKPETPSPYGTWKITSKSANWGSGFGTRWMGLNVPWGQYGIHGTNKPLSIN
CCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECC
NPDSKGCIRMFNKDVEELYKYVDVGTIVVIYGGPYNLSWNNFRTLKPGDKGADVLEVQRV
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHH
LKYRGYYAGKLDGIYGEGMKSIILKFKTDNNLSFSHYIDGEMYNKLGMQPFE
HHHCCCCCCCCCCHHHCCCEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC
>Mature Secondary Structure
MKRHNRIISTLLFLVLLICPKVAKASDLNRKSIQKNKEGYNILVDISEFKMYLIEKGSNK
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHEEEEEECCCCC
PIRRYPIAGGKPETPSPYGTWKITSKSANWGSGFGTRWMGLNVPWGQYGIHGTNKPLSIN
CCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECC
NPDSKGCIRMFNKDVEELYKYVDVGTIVVIYGGPYNLSWNNFRTLKPGDKGADVLEVQRV
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHH
LKYRGYYAGKLDGIYGEGMKSIILKFKTDNNLSFSHYIDGEMYNKLGMQPFE
HHHCCCCCCCCCCHHHCCCEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA