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The map label for this gene is 28210370

Identifier: 28210370

GI number: 28210370

Start: 660603

End: 661634

Strand: Direct

Name: 28210370

Synonym: CTC00641

Alternate gene names: NA

Gene position: 660603-661634 (Clockwise)

Preceding gene: 28210369

Following gene: 28210371

Centisome position: 23.6

GC content: 25.97

Gene sequence:

>1032_bases
ATGAAAATAAGTGGGGTTATTAGAAATTATAGAAAAAAGGAAAATCTTACTCAAGAGCAAGTTGCTAATTATTTAAATAT
AAGTGCACCAGCGGTGAATAAGTGGGAAAATGGGATATCATATCCAGATATAACGCTATTAGCACCTCTTGCACGTGTTT
TAAAAATAGATGTTAATACTTTATTAGCATTTAATGAGGAATTAACAGATGCAGAAGTAAACAATTTTACAAAAGAGATT
AGTGAAATAATATCAAAAGATGGGTATGAAAAGGCTTTTAAAAAGGGCAGTGATTTAATTAAGAACTATCCAAGCTGTGA
TAAGTTAATATTTAATATATCATCGGTATTAAGGGTACATATAGTTGTATCTGAAGTTCAACAAAAAGATAAATATGAAA
GAAAAATTATTGATTGGCTTCAACTTGTAGCAGCAAGCGGAAAAGAAAAGATAGCTTTTAACGCAAAATTATTATTATCA
GCAATTTATAGAGAGAAAAAAGAGTATGAAAAAGCTCAAGAAATGATAGATAAGATTCCAGAATTATACACTGCCAAAAA
ATTTCAACAGGCATTATTATTTGAAAGTAGCGGAGAACTTCTTGAGGCTTACTGTATTTATGAAGGTATATTATTAAAAA
ATGCTAATGAAATCTATGGTGTTTTATCTCTTATAATAGAAATGTTATTGAAAGAAAATAAATTTAGTGAAGCAGAAGAA
TATTCAGAACGTGCTAAAAAACTTGTGGAACTATTTGATTTAGGAACATACAATAAACATGTATTAGATTTATCTTTAGC
AAAAGAAAAACAGGATAAAGAAAAAACTATAGAAATAATTAGAAATATTATAAATGAAGCAAGTAACATTAATGATTTTA
TTAATTCAAAACTATATACACATATGGAATTTAATAAGAACAATAGTATGAATGAAGATGAATATAAAAAATTTATAAAA
ATGTCAATTAAAAAAGACAAAACACTTGATTTTGTCAAAAATGATTTTAGGATAAAAGTTCTGTTAGAATAA

Upstream 100 bases:

>100_bases
ATGAAAATCCTTCAATTGTTTAAAGTATATAGCTTTGATATCATTTAATTAATCGAGTTCGAACTTAATTAAATGTAAAA
TAAATGGAGGATTTAATCTT

Downstream 100 bases:

>100_bases
TACCAAACTAAAGAGTTGAGCATACCTTTTTTCGATGAATAAAAACTATATAATTTTGTAATTTTTAAATAAAAAAATAT
AGATGTTTATTTTTTATAAA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator Xre Family; Transcriptional Regulatory Protein; HTH/TPR Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; HTH Motif Containing Protein; Transcriptional Regulator Domain-Containing Protein; HTH Domain Protein; Helix-Turn-Helix Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKISGVIRNYRKKENLTQEQVANYLNISAPAVNKWENGISYPDITLLAPLARVLKIDVNTLLAFNEELTDAEVNNFTKEI
SEIISKDGYEKAFKKGSDLIKNYPSCDKLIFNISSVLRVHIVVSEVQQKDKYERKIIDWLQLVAASGKEKIAFNAKLLLS
AIYREKKEYEKAQEMIDKIPELYTAKKFQQALLFESSGELLEAYCIYEGILLKNANEIYGVLSLIIEMLLKENKFSEAEE
YSERAKKLVELFDLGTYNKHVLDLSLAKEKQDKEKTIEIIRNIINEASNINDFINSKLYTHMEFNKNNSMNEDEYKKFIK
MSIKKDKTLDFVKNDFRIKVLLE

Sequences:

>Translated_343_residues
MKISGVIRNYRKKENLTQEQVANYLNISAPAVNKWENGISYPDITLLAPLARVLKIDVNTLLAFNEELTDAEVNNFTKEI
SEIISKDGYEKAFKKGSDLIKNYPSCDKLIFNISSVLRVHIVVSEVQQKDKYERKIIDWLQLVAASGKEKIAFNAKLLLS
AIYREKKEYEKAQEMIDKIPELYTAKKFQQALLFESSGELLEAYCIYEGILLKNANEIYGVLSLIIEMLLKENKFSEAEE
YSERAKKLVELFDLGTYNKHVLDLSLAKEKQDKEKTIEIIRNIINEASNINDFINSKLYTHMEFNKNNSMNEDEYKKFIK
MSIKKDKTLDFVKNDFRIKVLLE
>Mature_343_residues
MKISGVIRNYRKKENLTQEQVANYLNISAPAVNKWENGISYPDITLLAPLARVLKIDVNTLLAFNEELTDAEVNNFTKEI
SEIISKDGYEKAFKKGSDLIKNYPSCDKLIFNISSVLRVHIVVSEVQQKDKYERKIIDWLQLVAASGKEKIAFNAKLLLS
AIYREKKEYEKAQEMIDKIPELYTAKKFQQALLFESSGELLEAYCIYEGILLKNANEIYGVLSLIIEMLLKENKFSEAEE
YSERAKKLVELFDLGTYNKHVLDLSLAKEKQDKEKTIEIIRNIINEASNINDFINSKLYTHMEFNKNNSMNEDEYKKFIK
MSIKKDKTLDFVKNDFRIKVLLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39802; Mature: 39802

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISGVIRNYRKKENLTQEQVANYLNISAPAVNKWENGISYPDITLLAPLARVLKIDVNT
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LLAFNEELTDAEVNNFTKEISEIISKDGYEKAFKKGSDLIKNYPSCDKLIFNISSVLRVH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH
IVVSEVQQKDKYERKIIDWLQLVAASGKEKIAFNAKLLLSAIYREKKEYEKAQEMIDKIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYTAKKFQQALLFESSGELLEAYCIYEGILLKNANEIYGVLSLIIEMLLKENKFSEAEE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
YSERAKKLVELFDLGTYNKHVLDLSLAKEKQDKEKTIEIIRNIINEASNINDFINSKLYT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HMEFNKNNSMNEDEYKKFIKMSIKKDKTLDFVKNDFRIKVLLE
EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MKISGVIRNYRKKENLTQEQVANYLNISAPAVNKWENGISYPDITLLAPLARVLKIDVNT
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LLAFNEELTDAEVNNFTKEISEIISKDGYEKAFKKGSDLIKNYPSCDKLIFNISSVLRVH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH
IVVSEVQQKDKYERKIIDWLQLVAASGKEKIAFNAKLLLSAIYREKKEYEKAQEMIDKIP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELYTAKKFQQALLFESSGELLEAYCIYEGILLKNANEIYGVLSLIIEMLLKENKFSEAEE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHH
YSERAKKLVELFDLGTYNKHVLDLSLAKEKQDKEKTIEIIRNIINEASNINDFINSKLYT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
HMEFNKNNSMNEDEYKKFIKMSIKKDKTLDFVKNDFRIKVLLE
EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA