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The map label for this gene is yjdF [H]

Identifier: 28210336

GI number: 28210336

Start: 626067

End: 626483

Strand: Direct

Name: yjdF [H]

Synonym: CTC00602

Alternate gene names: 28210336

Gene position: 626067-626483 (Clockwise)

Preceding gene: 28210334

Following gene: 28210337

Centisome position: 22.37

GC content: 25.18

Gene sequence:

>417_bases
ATGAAAACTAGTATTGAATTAACAGTATTTTTTGAGGATACATTTTGGGTAGGAGTATTTGAAAGAGTTTATGAAGGTAA
GTATGAAGTTTCAAGAGTTACATTTGGTTCTGAACCTAAAGATTATGAAGTTTATGATTTTATATTAAAAAACTTTAATG
ATTTAAGATTTAGTAATTCACTATCTAGTAATTTACTTAAAGATAAAAAAATAAATCCTAAAAGACTTCAAAGAAAAATC
AAAAAAGAGACGAAAAATATGGGAGTAGGTACCCAAGCACAAATTGCTATAAAATTGCAATATGAAGAAAAGAAGATAGA
GAGAAAAAAGGTTTCAAAAGAAAAAAAAGAAGCAGAAAAAAAGATGAAATTTAAACTAAGACAAGAAAAGAAATTAAGAA
AACATAAGGGGCATTAA

Upstream 100 bases:

>100_bases
GGTAGTCCGAACCTATTTGATTTTTAAATAGCAGTAACCTGCCCTCCTGGGGTTGTCCATTCTCTATGATTAAATTAATT
TTAACAGGAGGAATTTTAAA

Downstream 100 bases:

>100_bases
TATTAACTAGAGCTCATTAAATAAAGGTTTTCTGACTTTGATCAGAAAACCTTTATTTAATGAACAAGTAACAGTTTAGG
GGGCATATAGGTTATTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKTSIELTVFFEDTFWVGVFERVYEGKYEVSRVTFGSEPKDYEVYDFILKNFNDLRFSNSLSSNLLKDKKINPKRLQRKI
KKETKNMGVGTQAQIAIKLQYEEKKIERKKVSKEKKEAEKKMKFKLRQEKKLRKHKGH

Sequences:

>Translated_138_residues
MKTSIELTVFFEDTFWVGVFERVYEGKYEVSRVTFGSEPKDYEVYDFILKNFNDLRFSNSLSSNLLKDKKINPKRLQRKI
KKETKNMGVGTQAQIAIKLQYEEKKIERKKVSKEKKEAEKKMKFKLRQEKKLRKHKGH
>Mature_138_residues
MKTSIELTVFFEDTFWVGVFERVYEGKYEVSRVTFGSEPKDYEVYDFILKNFNDLRFSNSLSSNLLKDKKINPKRLQRKI
KKETKNMGVGTQAQIAIKLQYEEKKIERKKVSKEKKEAEKKMKFKLRQEKKLRKHKGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016787 [H]

Pfam domain/function: PF11208 DUF2992 [H]

EC number: NA

Molecular weight: Translated: 16558; Mature: 16558

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSIELTVFFEDTFWVGVFERVYEGKYEVSRVTFGSEPKDYEVYDFILKNFNDLRFSNS
CCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCH
LSSNLLKDKKINPKRLQRKIKKETKNMGVGTQAQIAIKLQYEEKKIERKKVSKEKKEAEK
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHH
KMKFKLRQEKKLRKHKGH
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTSIELTVFFEDTFWVGVFERVYEGKYEVSRVTFGSEPKDYEVYDFILKNFNDLRFSNS
CCCEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHCCCH
LSSNLLKDKKINPKRLQRKIKKETKNMGVGTQAQIAIKLQYEEKKIERKKVSKEKKEAEK
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHH
KMKFKLRQEKKLRKHKGH
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]