| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is thrC [H]
Identifier: 28210306
GI number: 28210306
Start: 589152
End: 590360
Strand: Direct
Name: thrC [H]
Synonym: CTC00570
Alternate gene names: 28210306
Gene position: 589152-590360 (Clockwise)
Preceding gene: 28210305
Following gene: 28210307
Centisome position: 21.05
GC content: 32.18
Gene sequence:
>1209_bases ATGAAAGATTTTAAACTTATATGTACAGGTTGTGGAGAGACTTATTCTATAAAAAGAGTCCATCCAAGATGCGAGAAATG TAATGAACCACTAGAAATGGAGCTTGTAAAAGAAGGTAAAATAAAAGATGGGAATCCATTAACTCAAACTATACTTGAAA GGTATCAGGATTTTTTTCCCTTTGATGAAATAAATAATGAATTATCTTTAAATGAAGGATTTACATCTCTAGTGTCATCT CCAAGAATGGCTAAAAGAATAGGAATAAAGAATATATATTTTAAAAATGAAAGTCAAAATCCTACATGGTCTTTTAAAGA TAGAGGAACATTGTTTGGGATACACCACGCTTATAGTATGGGCTACAAGAAAGTAGGAGCGGTTTCAACTGGAAATATGG CGGTATCTGTAGCAGCTTATGGACAAAGAGCAGGATTTGAAACCTTTATTTTTGTTGGGGAAAATATACCAGAAGAAAAA TTAAATCCTGTTGCAATATATGGAGCCAATCTAATTAAAGTAGAAGGAGACTATGGAAAACTTTATTATGAAAGTCTTGA AATAGGTAAAGATCAAGGAATTTATTTTATAAACTCCGATGTTACATATAGAGTTGAAGGATACAAGACAGCAGCTTTTG AAATGTGTGAACAATTAAATTTTAATGTTCCTGATTATGTGGTTGTACCAACAAGTGCAGGAGGAAATATAAGGGGTATC CTTAAAGGATTCAAGGAATTTAAGGAGGCAGGAATAATTGATAGAGTACCTAAGATGATATGTGCTCAAGCATCAGGATG TTCACCTATTTGTAATTCTTTTAAAGAGGGAAAAGATGAAATAGAAAGAATAATGGATCCTTGCACTATTGCTCATGGTA TAGAAAATCCATTTCCTCCAAGTGGAAATGATACTTTAAGAAAGATAAGAGAAAATGGTGGGACATGTGTAGCGGTTACA GATGAAGAAATAATAAAGGCTCAAAAGGAAATGGCGAAAGAAGGAATATTTGTTCAACCAGAATCTTGCGTGCCATTAGC ATCTGTAAAAAAGCTAAAGATTGAAGGATATTTAGATGAGAATGACTCAGTAGCCTGTGTATTAACAGGAAGTGGATTAA AATACACAAAAGCTTTTGAAAAACACAATTTATCTTCATATGAATGTAAATTACAAGTTTTAGAAACTTTTATAGAAGAA AACTTTTAA
Upstream 100 bases:
>100_bases ATTATAGATATAATATTCTCAAAATTATTTATTTTAAGAGGATTTTAATATTTAACATTGAAGCTATAGCTATAATTTAA AATTAAGGAGGAATTTAGAT
Downstream 100 bases:
>100_bases ACATGCCCTAGGGCATGTTTTTTATTATAGGAATAAGTGATAGAATATAATATAATATATATTGATTTTGTTAAGAATTT TTTAAAAAAGTATTATGGCA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKDFKLICTGCGETYSIKRVHPRCEKCNEPLEMELVKEGKIKDGNPLTQTILERYQDFFPFDEINNELSLNEGFTSLVSS PRMAKRIGIKNIYFKNESQNPTWSFKDRGTLFGIHHAYSMGYKKVGAVSTGNMAVSVAAYGQRAGFETFIFVGENIPEEK LNPVAIYGANLIKVEGDYGKLYYESLEIGKDQGIYFINSDVTYRVEGYKTAAFEMCEQLNFNVPDYVVVPTSAGGNIRGI LKGFKEFKEAGIIDRVPKMICAQASGCSPICNSFKEGKDEIERIMDPCTIAHGIENPFPPSGNDTLRKIRENGGTCVAVT DEEIIKAQKEMAKEGIFVQPESCVPLASVKKLKIEGYLDENDSVACVLTGSGLKYTKAFEKHNLSSYECKLQVLETFIEE NF
Sequences:
>Translated_402_residues MKDFKLICTGCGETYSIKRVHPRCEKCNEPLEMELVKEGKIKDGNPLTQTILERYQDFFPFDEINNELSLNEGFTSLVSS PRMAKRIGIKNIYFKNESQNPTWSFKDRGTLFGIHHAYSMGYKKVGAVSTGNMAVSVAAYGQRAGFETFIFVGENIPEEK LNPVAIYGANLIKVEGDYGKLYYESLEIGKDQGIYFINSDVTYRVEGYKTAAFEMCEQLNFNVPDYVVVPTSAGGNIRGI LKGFKEFKEAGIIDRVPKMICAQASGCSPICNSFKEGKDEIERIMDPCTIAHGIENPFPPSGNDTLRKIRENGGTCVAVT DEEIIKAQKEMAKEGIFVQPESCVPLASVKKLKIEGYLDENDSVACVLTGSGLKYTKAFEKHNLSSYECKLQVLETFIEE NF >Mature_402_residues MKDFKLICTGCGETYSIKRVHPRCEKCNEPLEMELVKEGKIKDGNPLTQTILERYQDFFPFDEINNELSLNEGFTSLVSS PRMAKRIGIKNIYFKNESQNPTWSFKDRGTLFGIHHAYSMGYKKVGAVSTGNMAVSVAAYGQRAGFETFIFVGENIPEEK LNPVAIYGANLIKVEGDYGKLYYESLEIGKDQGIYFINSDVTYRVEGYKTAAFEMCEQLNFNVPDYVVVPTSAGGNIRGI LKGFKEFKEAGIIDRVPKMICAQASGCSPICNSFKEGKDEIERIMDPCTIAHGIENPFPPSGNDTLRKIRENGGTCVAVT DEEIIKAQKEMAKEGIFVQPESCVPLASVKKLKIEGYLDENDSVACVLTGSGLKYTKAFEKHNLSSYECKLQVLETFIEE NF
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 44900; Mature: 44900
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFKLICTGCGETYSIKRVHPRCEKCNEPLEMELVKEGKIKDGNPLTQTILERYQDFFP CCCCEEEEECCCCCEEEEECCCHHHHCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHCCC FDEINNELSLNEGFTSLVSSPRMAKRIGIKNIYFKNESQNPTWSFKDRGTLFGIHHAYSM HHHCCCCEECCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEEHHHHHC GYKKVGAVSTGNMAVSVAAYGQRAGFETFIFVGENIPEEKLNPVAIYGANLIKVEGDYGK CHHHHCCEECCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCEEEECCEEEEEECCCCE LYYESLEIGKDQGIYFINSDVTYRVEGYKTAAFEMCEQLNFNVPDYVVVPTSAGGNIRGI EEEEHHHCCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH LKGFKEFKEAGIIDRVPKMICAQASGCSPICNSFKEGKDEIERIMDPCTIAHGIENPFPP HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC SGNDTLRKIRENGGTCVAVTDEEIIKAQKEMAKEGIFVQPESCVPLASVKKLKIEGYLDE CCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCEECCCCCCCHHHHEEEEEEEEECC NDSVACVLTGSGLKYTKAFEKHNLSSYECKLQVLETFIEENF CCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDFKLICTGCGETYSIKRVHPRCEKCNEPLEMELVKEGKIKDGNPLTQTILERYQDFFP CCCCEEEEECCCCCEEEEECCCHHHHCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHCCC FDEINNELSLNEGFTSLVSSPRMAKRIGIKNIYFKNESQNPTWSFKDRGTLFGIHHAYSM HHHCCCCEECCCCHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEEHHHHHC GYKKVGAVSTGNMAVSVAAYGQRAGFETFIFVGENIPEEKLNPVAIYGANLIKVEGDYGK CHHHHCCEECCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCEEEECCEEEEEECCCCE LYYESLEIGKDQGIYFINSDVTYRVEGYKTAAFEMCEQLNFNVPDYVVVPTSAGGNIRGI EEEEHHHCCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH LKGFKEFKEAGIIDRVPKMICAQASGCSPICNSFKEGKDEIERIMDPCTIAHGIENPFPP HHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC SGNDTLRKIRENGGTCVAVTDEEIIKAQKEMAKEGIFVQPESCVPLASVKKLKIEGYLDE CCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCEECCCCCCCHHHHEEEEEEEEECC NDSVACVLTGSGLKYTKAFEKHNLSSYECKLQVLETFIEENF CCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]