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The map label for this gene is yecS [H]

Identifier: 28210297

GI number: 28210297

Start: 578640

End: 579290

Strand: Direct

Name: yecS [H]

Synonym: CTC00559

Alternate gene names: 28210297

Gene position: 578640-579290 (Clockwise)

Preceding gene: 28210296

Following gene: 28210298

Centisome position: 20.67

GC content: 28.88

Gene sequence:

>651_bases
ATGGATATGAATTTACTTAAGAATATAATTCCATTATTAATTAAAGCTACAGGAAGAACTATAGAATTAACAATAATTTC
TGTAGTACTTGGAAGTTTAATTGGAGTTTTTGTTGCACTTTTAAAACTTTCAAAAATAAAAGTATTAAATGGATTGGCAT
CATTTTATACATGGATAATAAGAGGAACTCCTATGTTATTGCAATTATATTTTTTCTATTATGGATTACCTTTTCTAAAT
ATAGAATTAAGTGCTATGACTGCAGCTATTATAGGACTTAGTTTAAACTCAGGAGCTTATATGGCAGAAATAATAAGAGG
CGGAATAATATCCGTTGATAAAGGGCAATTTGAAGCATGTAAAGCCTTAGGATTTAGCTATGGACAAACTATGAAAAGAA
TAATTTTACCTCAAGCAGTAAGAGTTTTAGTTCCACCTACTGGAAATGAATTTATAACTATATTAAAGGATACATCATTA
GTATCTGTATTAGGTGGTATGGAAGAGGTAATGAGGGTAGCTCAACAAAGCTATTCTGCAACTTTTAGACCATTAGAACC
TTTTTTAGTGGCAGCATGTATATATCTTATATTAACTACAGTATTTACTATAGTATTTGGCAAAATAGAGAAAAAGGTTT
CTGTTTATTAA

Upstream 100 bases:

>100_bases
GGAGCAGACATATATAAAGATCAAAAATAAAAATTAGAATAGGGCACTAATTTATTAGTGCCTGATAATTTTTCAAGTTA
TAAAAAGGGGGACGATTATA

Downstream 100 bases:

>100_bases
ACTTAAGGTATAAATTACAGATTTAGATAGGAGGTATCACAATGAATGTAATAGAAACTGTGGATATAACAAAACGTTTT
AATATATTAACAGTATTTGA

Product: cystine/glutamine permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MDMNLLKNIIPLLIKATGRTIELTIISVVLGSLIGVFVALLKLSKIKVLNGLASFYTWIIRGTPMLLQLYFFYYGLPFLN
IELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSL
VSVLGGMEEVMRVAQQSYSATFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVSVY

Sequences:

>Translated_216_residues
MDMNLLKNIIPLLIKATGRTIELTIISVVLGSLIGVFVALLKLSKIKVLNGLASFYTWIIRGTPMLLQLYFFYYGLPFLN
IELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSL
VSVLGGMEEVMRVAQQSYSATFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVSVY
>Mature_216_residues
MDMNLLKNIIPLLIKATGRTIELTIISVVLGSLIGVFVALLKLSKIKVLNGLASFYTWIIRGTPMLLQLYFFYYGLPFLN
IELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSL
VSVLGGMEEVMRVAQQSYSATFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVSVY

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=42.7230046948357, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1787030, Length=216, Percent_Identity=35.6481481481481, Blast_Score=143, Evalue=7e-36,
Organism=Escherichia coli, GI1788646, Length=207, Percent_Identity=38.6473429951691, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=34.9753694581281, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=30.9859154929577, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=26.7543859649123, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=31.1881188118812, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786874, Length=208, Percent_Identity=26.4423076923077, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI48994930, Length=178, Percent_Identity=29.7752808988764, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23743; Mature: 23743

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMNLLKNIIPLLIKATGRTIELTIISVVLGSLIGVFVALLKLSKIKVLNGLASFYTWII
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPMLLQLYFFYYGLPFLNIELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEAC
CCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHEECCCCHHHHHHHCCCCEEECCCHHHHH
KALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSLVSVLGGMEEVMRVAQQSYSA
HHHCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHCC
TFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVSVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDMNLLKNIIPLLIKATGRTIELTIISVVLGSLIGVFVALLKLSKIKVLNGLASFYTWII
CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGTPMLLQLYFFYYGLPFLNIELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEAC
CCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHEECCCCHHHHHHHCCCCEEECCCHHHHH
KALGFSYGQTMKRIILPQAVRVLVPPTGNEFITILKDTSLVSVLGGMEEVMRVAQQSYSA
HHHCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHCC
TFRPLEPFLVAACIYLILTTVFTIVFGKIEKKVSVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]