Click here to switch to the map view.

The map label for this gene is 28210282

Identifier: 28210282

GI number: 28210282

Start: 558685

End: 560451

Strand: Direct

Name: 28210282

Synonym: CTC00543

Alternate gene names: NA

Gene position: 558685-560451 (Clockwise)

Preceding gene: 28210276

Following gene: 28210283

Centisome position: 19.96

GC content: 26.66

Gene sequence:

>1767_bases
GTGCTCCATTTGAACAACTTGAAACCTGAAAACAATAGTGAAAACAGTTCTATAGAATCCGGATTGAAAGATGGGATCAT
GGATAAATCTATAACGATCTTAATAATTTTATCTATAATTGTTGTACTATCGGCTCTAGTTATATATAGATTTTCTTTAA
AAAATACACAGCATATTTCTAATAGTAAGGGAGATAAATATTTAATAGAAGGTAATTATGATAAGGCTTTAGAAGAATAT
GAAAGATCTTATAAAAAAGATGGTGCTATAATATGGAAAGCTAAGGCAGCAGAAGTTTACTCATTAAAGGGAGATAAATA
TAAAGCAATACAAAATATAGAGGAAATAAAAAATAATGATAAAAAGGATTCAAAATCCTTAAGTTATGTAACGTACATTC
AATTAATTAATGAGGATTATAAAAAGGCATTGTCCGATGGAGAAGGATTCTTAAAAGAAAATCCAAAGGATAAAACACTT
ATAGCATCTATGTTTTCTGCATATATTTTTAATAGAGAGTATGAAAAGGCAAAAAAGTTATTAAAGTCTTATCCCTTAGA
TGAAAAATCTTCTTATGATATGGCTAAATATTCTGAGATGCTTATGAGTGTTGGAGAAGAAGAGAAGTCAATAGAACATT
TAAAAAAAGCTTGGCATTTAAATAAGGATGAATACAAAGTTTATGATGTAATCATTCATGAAGCTATAAATGATAAAAAT
AAAGTATTGGATACAATATCTAAATTATCTATAAAAGAGCCCGAAGAATTAGCTTATAGAATTTGGAGAGCTAAAATATA
TTCAAGAAGTTTAGAAACAACAGAAGAAGCACAAAAAATAATGGATAGTTTAAAAGGACAGAATATAGGCAAAATAATTC
CAAAAGCTATAGAGGCTTCTATACTAGTGAACAAAGAAGAAAAAGATAAGGCAGAAGAGGTAATAGACAAGCTATTAAAG
GAAAATAAAAAGGACTACAGGGTATACCACACAGCTTCTTGGTTCTACTTGTCAATGGGAGATTTAAATAAGGCAGAGGA
ATATTGTATAAAATCTATTTATGAAAACCAAGACTATGTAGACAATTATGCCTTTTTAATGCCTGAAATACTTAAAAGAC
AAAAGAAGAGTTTAAAAAATAAAGAGGAAAAAAATAATACTAAAGAAAATCAAATAAAAAATGTAGATACATTTTTTAAT
ATAGCTTTATGTAAGGAACCTTATAATAAAAATATAATGATAAATACAGCAAATTACTCCTTAGAAAGAGGAGAAGATAT
GGATAAAACATTAAAATACTTAAAAATGGCAGAGTTAGTAAAACCTTTAGATGCAGAAGTAAAATATAATATTGCTTTAA
CTTATATATATCAAAACAAAGATAAAGAAGCGGAAAAAACTTTAAAGGAATGCATTAAAATTAAATCACAAATTCCAAAG
TATCATAGAACTTTAGGAACGATATATTTTTTAAATGGTAAAAATAATGAGGCAATAAAAGAAATAAAAGAAGCTTATGA
TAAGGACGAAAATGACCCATTAACTCTAAATAATGCAGGTTGCTACTATATGATGGTTAATATGGATTTGGAAAGAGGAA
TGTATAACTTAAGGACAGCTAAAAACTATATAAGTGGAAATATGGATAAATACAATAAAAAAACCATAGAAGAAAATTAT
AAAAAAGGAAAAAAACTTTTAGAACAATATAAAAAGGCTAAAGGCAATGAAAAATTGGAAATACCAGAGCTTAAATTGTT
TTACTAA

Upstream 100 bases:

>100_bases
TTAATATATTATCTTGTCTATAATTCCAAATATTCCATGAATATTTATATAGCTTTTTAAATATATATTTGATAATATTT
ACTTAATATATAAGGGGGAG

Downstream 100 bases:

>100_bases
AATACAAGGAAAACTGTGAATATATGATAATATATAGATGTAGTATTGTTTATAGAAACAATACTACATCTTTTTTATAT
TGATAAAAGTCTTTATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MLHLNNLKPENNSENSSIESGLKDGIMDKSITILIILSIIVVLSALVIYRFSLKNTQHISNSKGDKYLIEGNYDKALEEY
ERSYKKDGAIIWKAKAAEVYSLKGDKYKAIQNIEEIKNNDKKDSKSLSYVTYIQLINEDYKKALSDGEGFLKENPKDKTL
IASMFSAYIFNREYEKAKKLLKSYPLDEKSSYDMAKYSEMLMSVGEEEKSIEHLKKAWHLNKDEYKVYDVIIHEAINDKN
KVLDTISKLSIKEPEELAYRIWRAKIYSRSLETTEEAQKIMDSLKGQNIGKIIPKAIEASILVNKEEKDKAEEVIDKLLK
ENKKDYRVYHTASWFYLSMGDLNKAEEYCIKSIYENQDYVDNYAFLMPEILKRQKKSLKNKEEKNNTKENQIKNVDTFFN
IALCKEPYNKNIMINTANYSLERGEDMDKTLKYLKMAELVKPLDAEVKYNIALTYIYQNKDKEAEKTLKECIKIKSQIPK
YHRTLGTIYFLNGKNNEAIKEIKEAYDKDENDPLTLNNAGCYYMMVNMDLERGMYNLRTAKNYISGNMDKYNKKTIEENY
KKGKKLLEQYKKAKGNEKLEIPELKLFY

Sequences:

>Translated_588_residues
MLHLNNLKPENNSENSSIESGLKDGIMDKSITILIILSIIVVLSALVIYRFSLKNTQHISNSKGDKYLIEGNYDKALEEY
ERSYKKDGAIIWKAKAAEVYSLKGDKYKAIQNIEEIKNNDKKDSKSLSYVTYIQLINEDYKKALSDGEGFLKENPKDKTL
IASMFSAYIFNREYEKAKKLLKSYPLDEKSSYDMAKYSEMLMSVGEEEKSIEHLKKAWHLNKDEYKVYDVIIHEAINDKN
KVLDTISKLSIKEPEELAYRIWRAKIYSRSLETTEEAQKIMDSLKGQNIGKIIPKAIEASILVNKEEKDKAEEVIDKLLK
ENKKDYRVYHTASWFYLSMGDLNKAEEYCIKSIYENQDYVDNYAFLMPEILKRQKKSLKNKEEKNNTKENQIKNVDTFFN
IALCKEPYNKNIMINTANYSLERGEDMDKTLKYLKMAELVKPLDAEVKYNIALTYIYQNKDKEAEKTLKECIKIKSQIPK
YHRTLGTIYFLNGKNNEAIKEIKEAYDKDENDPLTLNNAGCYYMMVNMDLERGMYNLRTAKNYISGNMDKYNKKTIEENY
KKGKKLLEQYKKAKGNEKLEIPELKLFY
>Mature_588_residues
MLHLNNLKPENNSENSSIESGLKDGIMDKSITILIILSIIVVLSALVIYRFSLKNTQHISNSKGDKYLIEGNYDKALEEY
ERSYKKDGAIIWKAKAAEVYSLKGDKYKAIQNIEEIKNNDKKDSKSLSYVTYIQLINEDYKKALSDGEGFLKENPKDKTL
IASMFSAYIFNREYEKAKKLLKSYPLDEKSSYDMAKYSEMLMSVGEEEKSIEHLKKAWHLNKDEYKVYDVIIHEAINDKN
KVLDTISKLSIKEPEELAYRIWRAKIYSRSLETTEEAQKIMDSLKGQNIGKIIPKAIEASILVNKEEKDKAEEVIDKLLK
ENKKDYRVYHTASWFYLSMGDLNKAEEYCIKSIYENQDYVDNYAFLMPEILKRQKKSLKNKEEKNNTKENQIKNVDTFFN
IALCKEPYNKNIMINTANYSLERGEDMDKTLKYLKMAELVKPLDAEVKYNIALTYIYQNKDKEAEKTLKECIKIKSQIPK
YHRTLGTIYFLNGKNNEAIKEIKEAYDKDENDPLTLNNAGCYYMMVNMDLERGMYNLRTAKNYISGNMDKYNKKTIEENY
KKGKKLLEQYKKAKGNEKLEIPELKLFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68744; Mature: 68744

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLNNLKPENNSENSSIESGLKDGIMDKSITILIILSIIVVLSALVIYRFSLKNTQHIS
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC
NSKGDKYLIEGNYDKALEEYERSYKKDGAIIWKAKAAEVYSLKGDKYKAIQNIEEIKNND
CCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHCCC
KKDSKSLSYVTYIQLINEDYKKALSDGEGFLKENPKDKTLIASMFSAYIFNREYEKAKKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKSYPLDEKSSYDMAKYSEMLMSVGEEEKSIEHLKKAWHLNKDEYKVYDVIIHEAINDKN
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
KVLDTISKLSIKEPEELAYRIWRAKIYSRSLETTEEAQKIMDSLKGQNIGKIIPKAIEAS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILVNKEEKDKAEEVIDKLLKENKKDYRVYHTASWFYLSMGDLNKAEEYCIKSIYENQDYV
HEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHH
DNYAFLMPEILKRQKKSLKNKEEKNNTKENQIKNVDTFFNIALCKEPYNKNIMINTANYS
HHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCC
LERGEDMDKTLKYLKMAELVKPLDAEVKYNIALTYIYQNKDKEAEKTLKECIKIKSQIPK
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCH
YHRTLGTIYFLNGKNNEAIKEIKEAYDKDENDPLTLNNAGCYYMMVNMDLERGMYNLRTA
HHHHHCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHCHHHHHHH
KNYISGNMDKYNKKTIEENYKKGKKLLEQYKKAKGNEKLEIPELKLFY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure
MLHLNNLKPENNSENSSIESGLKDGIMDKSITILIILSIIVVLSALVIYRFSLKNTQHIS
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCC
NSKGDKYLIEGNYDKALEEYERSYKKDGAIIWKAKAAEVYSLKGDKYKAIQNIEEIKNND
CCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHCCC
KKDSKSLSYVTYIQLINEDYKKALSDGEGFLKENPKDKTLIASMFSAYIFNREYEKAKKL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKSYPLDEKSSYDMAKYSEMLMSVGEEEKSIEHLKKAWHLNKDEYKVYDVIIHEAINDKN
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
KVLDTISKLSIKEPEELAYRIWRAKIYSRSLETTEEAQKIMDSLKGQNIGKIIPKAIEAS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILVNKEEKDKAEEVIDKLLKENKKDYRVYHTASWFYLSMGDLNKAEEYCIKSIYENQDYV
HEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHH
DNYAFLMPEILKRQKKSLKNKEEKNNTKENQIKNVDTFFNIALCKEPYNKNIMINTANYS
HHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCC
LERGEDMDKTLKYLKMAELVKPLDAEVKYNIALTYIYQNKDKEAEKTLKECIKIKSQIPK
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCH
YHRTLGTIYFLNGKNNEAIKEIKEAYDKDENDPLTLNNAGCYYMMVNMDLERGMYNLRTA
HHHHHCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCHHHCHHHHHHH
KNYISGNMDKYNKKTIEENYKKGKKLLEQYKKAKGNEKLEIPELKLFY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA