| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210283
Identifier: 28210283
GI number: 28210283
Start: 560613
End: 561758
Strand: Direct
Name: 28210283
Synonym: CTC00544
Alternate gene names: NA
Gene position: 560613-561758 (Clockwise)
Preceding gene: 28210282
Following gene: 28210284
Centisome position: 20.03
GC content: 26.0
Gene sequence:
>1146_bases ATGAAAAATAGTGGTTTTGGTTTTAGTAAGATTTCTAAAAAATTTATAATTTGTTCTCTAATTTTAGCTATAGCTAGTGG TAATTTTATTGGATGTGGTAATAAAAAATCAGAGGAAGGTGTATTCACCACTAAATGGGAAAATTTTTATGATGGAGACA ATATAGTTTTTTATTATGAGTCAGAGAAAAATCCTAATCTACAAAAGTTAAAAGCAAAATATGATTTAGATGAGATAGTT AAAGATAGCACTGATGAATTAGATAAAGCTTTAAAGATAATGGATTGGATAAATCAGAAAATGGAGTTTAATAAGGGAAG TATGAGCACAAAAAATGATGCTATAAATATACTTAAACAAGCGGAAAATAACAATAGTTTTTCTGATAGAGAATTTTCAA TAGTGTTTAGTCAATGTGCATCATCACTAGGTTTATATGCAAGAAGAGGAGAGTTTAGAATAAAGGGGAGTCAACATAAT GACAAGGATTATTATTATAAAATTTGTGAAGTTTGGAGCAGCAAACATAATAAATGGATAATGTTAGATGTAGCAAGTAA TACTTATATGGAGAGTGAAGGAAAGCTTTTAAGTGCAATAGAATTATTAAATAAGGGTCTTGATAATGTAAATACAAAAG GAATAAAGAATATAGAAAAGTATGTTAAAAAGATGAAGCCTTATATGTATACATATACTATACAAATAGATAATAATCTT TATGGGTTACCTAAGAGTAATTCTTTTATTACTTATATACCTAAAGGACCTATACCAGAGATTTGTATAGAAGGAAGAAT AATTCGTCCTACTATATTTGTAAATAATGATATAATATTTAAGAAACCACCAACAGCTGCAAGGAAAGAATCTGATAATA AGGATAAAATACCTACACTAATATTATCTAAAAAAGTATCAGAAGATAATAGAAAAGATAATGAGGTAATAATCTATGGA GCAGCTTTTAAGGATAGTGGAATGTTGAAAGGATTTTATATAAGTATAAATAATGATGAGTGGATGGATATAAATAACTA TTTTACTATACCTTTAAAAGAAGGAGAAAATAATATAAGATTATCTTTAGATAAGAAAAATATATTAAGAGAAGTAAATT TAAAGTATTTAACAGCTGATAAATAA
Upstream 100 bases:
>100_bases TACTACATCTTTTTTATATTGATAAAAGTCTTTATTTAAATATGGTTTGGTCGATATAGACTATTAGTGAATTAGTTTTA AGATTTGAGGTGGATATTTT
Downstream 100 bases:
>100_bases ATTATTATAATAATTTTACTAATATCCATACTATAATCATGAAAAAAGTAGTATAATATATAGGATTGTTTTTAAAATTT ATGTATAGAGAGCGAGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKNSGFGFSKISKKFIICSLILAIASGNFIGCGNKKSEEGVFTTKWENFYDGDNIVFYYESEKNPNLQKLKAKYDLDEIV KDSTDELDKALKIMDWINQKMEFNKGSMSTKNDAINILKQAENNNSFSDREFSIVFSQCASSLGLYARRGEFRIKGSQHN DKDYYYKICEVWSSKHNKWIMLDVASNTYMESEGKLLSAIELLNKGLDNVNTKGIKNIEKYVKKMKPYMYTYTIQIDNNL YGLPKSNSFITYIPKGPIPEICIEGRIIRPTIFVNNDIIFKKPPTAARKESDNKDKIPTLILSKKVSEDNRKDNEVIIYG AAFKDSGMLKGFYISINNDEWMDINNYFTIPLKEGENNIRLSLDKKNILREVNLKYLTADK
Sequences:
>Translated_381_residues MKNSGFGFSKISKKFIICSLILAIASGNFIGCGNKKSEEGVFTTKWENFYDGDNIVFYYESEKNPNLQKLKAKYDLDEIV KDSTDELDKALKIMDWINQKMEFNKGSMSTKNDAINILKQAENNNSFSDREFSIVFSQCASSLGLYARRGEFRIKGSQHN DKDYYYKICEVWSSKHNKWIMLDVASNTYMESEGKLLSAIELLNKGLDNVNTKGIKNIEKYVKKMKPYMYTYTIQIDNNL YGLPKSNSFITYIPKGPIPEICIEGRIIRPTIFVNNDIIFKKPPTAARKESDNKDKIPTLILSKKVSEDNRKDNEVIIYG AAFKDSGMLKGFYISINNDEWMDINNYFTIPLKEGENNIRLSLDKKNILREVNLKYLTADK >Mature_381_residues MKNSGFGFSKISKKFIICSLILAIASGNFIGCGNKKSEEGVFTTKWENFYDGDNIVFYYESEKNPNLQKLKAKYDLDEIV KDSTDELDKALKIMDWINQKMEFNKGSMSTKNDAINILKQAENNNSFSDREFSIVFSQCASSLGLYARRGEFRIKGSQHN DKDYYYKICEVWSSKHNKWIMLDVASNTYMESEGKLLSAIELLNKGLDNVNTKGIKNIEKYVKKMKPYMYTYTIQIDNNL YGLPKSNSFITYIPKGPIPEICIEGRIIRPTIFVNNDIIFKKPPTAARKESDNKDKIPTLILSKKVSEDNRKDNEVIIYG AAFKDSGMLKGFYISINNDEWMDINNYFTIPLKEGENNIRLSLDKKNILREVNLKYLTADK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43856; Mature: 43856
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSGFGFSKISKKFIICSLILAIASGNFIGCGNKKSEEGVFTTKWENFYDGDNIVFYYE CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEECCCCEEEEEE SEKNPNLQKLKAKYDLDEIVKDSTDELDKALKIMDWINQKMEFNKGSMSTKNDAINILKQ CCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AENNNSFSDREFSIVFSQCASSLGLYARRGEFRIKGSQHNDKDYYYKICEVWSSKHNKWI HCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEE MLDVASNTYMESEGKLLSAIELLNKGLDNVNTKGIKNIEKYVKKMKPYMYTYTIQIDNNL EEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCE YGLPKSNSFITYIPKGPIPEICIEGRIIRPTIFVNNDIIFKKPPTAARKESDNKDKIPTL ECCCCCCCEEEECCCCCCCHHHHCCEEEEEEEEECCCEEEECCCCHHHCCCCCCCCCCEE ILSKKVSEDNRKDNEVIIYGAAFKDSGMLKGFYISINNDEWMDINNYFTIPLKEGENNIR EEEHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCEEEEEEECCCCCEE LSLDKKNILREVNLKYLTADK EEECHHHHHHHCCEEEEECCC >Mature Secondary Structure MKNSGFGFSKISKKFIICSLILAIASGNFIGCGNKKSEEGVFTTKWENFYDGDNIVFYYE CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCEECCCCEEEEEE SEKNPNLQKLKAKYDLDEIVKDSTDELDKALKIMDWINQKMEFNKGSMSTKNDAINILKQ CCCCCCHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH AENNNSFSDREFSIVFSQCASSLGLYARRGEFRIKGSQHNDKDYYYKICEVWSSKHNKWI HCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCCEE MLDVASNTYMESEGKLLSAIELLNKGLDNVNTKGIKNIEKYVKKMKPYMYTYTIQIDNNL EEEECCCCEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCE YGLPKSNSFITYIPKGPIPEICIEGRIIRPTIFVNNDIIFKKPPTAARKESDNKDKIPTL ECCCCCCCEEEECCCCCCCHHHHCCEEEEEEEEECCCEEEECCCCHHHCCCCCCCCCCEE ILSKKVSEDNRKDNEVIIYGAAFKDSGMLKGFYISINNDEWMDINNYFTIPLKEGENNIR EEEHHCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCEEEEEEECCCCCEE LSLDKKNILREVNLKYLTADK EEECHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA