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The map label for this gene is yidK [H]

Identifier: 28210256

GI number: 28210256

Start: 521977

End: 523569

Strand: Direct

Name: yidK [H]

Synonym: CTC00514

Alternate gene names: 28210256

Gene position: 521977-523569 (Clockwise)

Preceding gene: 28210255

Following gene: 28210257

Centisome position: 18.65

GC content: 31.26

Gene sequence:

>1593_bases
TTGAGCATAATAACGTGTATATCATTTGTAACTTTTACAGCCTTAGTTGCAGTTTTATCATGGTATAAAACCCGAAATGA
TGATTTATCTAGCCAAGACGGATATTTCCTTGCAGGGAGAAGCTTAACGGGAGTTTTTATAGGTGGATCTTTAATGCTAA
CCAATTTATCTACAGAACAAATGGTAGGATTAAATGGACAAGGATATAAATATACAATGGCAGTAATGGCTTGGGAAGTA
ACTTCGGCTTTTGCTTTGGTACTTATGTCTCAAGTATTTTTACCTAGATATTTAAAAAGTGGAATAACAACTATACCAGA
TTTTTTAGAAGAAAGATATGATTCATGTACTCGTAGGATAATATCTATATTATTTTTAATTGGATATATGGCAGCTTATT
TACCTACGGTATTATATTCAGGGGCTGTAGTTTTAAATAGTATATTTAATGTACCAGAAGTATTTGGAATTGGGCAAATG
CAAGCTTTAATTATGACAGTTTGGGCCATTGGAATAGTGGGTTCTATATATGCTATATTTGGTGGACTTAAAGCCGTTGC
AGTATCAGATACTTACAATGGAGTGGGACTTTTAATTGGTGGATTTATGATTACTGTATTTGCATTAATTAAATTAGGGG
GAGGAAGTCTTGCACAGGGAGTTGACACATTGATTACAGTTCATCCTGAAAAATTAAATTCTATAGGAGGAGCTGATTCA
CCCGTTCCTTGGACCGTATTATTTACTGGAATGCTTTTTAATAATTTATTTTATTGGTGTACCAATCAATCTATAGTACA
AAGAACTTTTGGAGCAAAAAACTTAGCAGAAGGACAAAAAGGTGTTCTTTTAGCAGGATTTTTTAAACTATTCGGACCCT
TATATTTAGTTTTGCCAGGGATTATTGCATTTCATTTATATGGAGGGTCACTGTCTAATCAAGATATGGCATATCCTACT
TTAGTAGTGGATGTTTTACCAAAATCTTTAGCAGGATTCTTTGCAGCAGTGTTATTTGGAGCTATTTTAAGTTCCTTTAA
TAGTGCTTTAAACAGTTCAGTAACCTTATTTACTTTAGATATTTATAGACCAATATTTAAACCAAATTCTACAGATGAAG
AGTTAGTTCATGTTGGTAAAAAGTTCGGAGCTATTTTAGCTATAATATCAATGGTTATAGCACCGCTTATAATTAACGCA
CCATCAGGTTTATATAATTATTTGCAAGAATGTAATGGTTTTTATAATGTACCTATTTTAGCAGCTATTTTAGTTGGATT
CTTCTCAAAGAAGGTTCCTTCAATAGCACCAAAGATAGCATTGGTATTTCATATTATATTTTATAGTATATCTAAGATAG
TTTGGGGACATGTCAACTTCTTACATGTATTAGGCTTTTTATTTCCAGCGTGTGTAGTTGTAATGCTTATAATAGGAAAA
ATCAAACCACGTGAAAATGATTATGTTCAAAAATATACTAAACAAGTTGATATAACACCTTGGAGTAAATCTAAATTAGT
TTCAATAGTTATAAGTATATTAATGATTTGTGTATATATTTTATTTTCAAAGATTGGAATAGTATGTAAGTAA

Upstream 100 bases:

>100_bases
ATAAACACTATACCCCATATTATAAATGTAAATTTAAAATTTGCAAATCAAACCTTTACTATATATAAAATAATGGGATT
TTTAGGGGGGGAGAATAAAG

Downstream 100 bases:

>100_bases
AATAAAAAGTCGGAATATTCTAAAGTGTTAGGATATATCAAATAAAGTCCAGTGAAGTTGTTTCATTGGACTTTATTTGA
TATATAGAATTATAATTGAT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSIITCISFVTFTALVAVLSWYKTRNDDLSSQDGYFLAGRSLTGVFIGGSLMLTNLSTEQMVGLNGQGYKYTMAVMAWEV
TSAFALVLMSQVFLPRYLKSGITTIPDFLEERYDSCTRRIISILFLIGYMAAYLPTVLYSGAVVLNSIFNVPEVFGIGQM
QALIMTVWAIGIVGSIYAIFGGLKAVAVSDTYNGVGLLIGGFMITVFALIKLGGGSLAQGVDTLITVHPEKLNSIGGADS
PVPWTVLFTGMLFNNLFYWCTNQSIVQRTFGAKNLAEGQKGVLLAGFFKLFGPLYLVLPGIIAFHLYGGSLSNQDMAYPT
LVVDVLPKSLAGFFAAVLFGAILSSFNSALNSSVTLFTLDIYRPIFKPNSTDEELVHVGKKFGAILAIISMVIAPLIINA
PSGLYNYLQECNGFYNVPILAAILVGFFSKKVPSIAPKIALVFHIIFYSISKIVWGHVNFLHVLGFLFPACVVVMLIIGK
IKPRENDYVQKYTKQVDITPWSKSKLVSIVISILMICVYILFSKIGIVCK

Sequences:

>Translated_530_residues
MSIITCISFVTFTALVAVLSWYKTRNDDLSSQDGYFLAGRSLTGVFIGGSLMLTNLSTEQMVGLNGQGYKYTMAVMAWEV
TSAFALVLMSQVFLPRYLKSGITTIPDFLEERYDSCTRRIISILFLIGYMAAYLPTVLYSGAVVLNSIFNVPEVFGIGQM
QALIMTVWAIGIVGSIYAIFGGLKAVAVSDTYNGVGLLIGGFMITVFALIKLGGGSLAQGVDTLITVHPEKLNSIGGADS
PVPWTVLFTGMLFNNLFYWCTNQSIVQRTFGAKNLAEGQKGVLLAGFFKLFGPLYLVLPGIIAFHLYGGSLSNQDMAYPT
LVVDVLPKSLAGFFAAVLFGAILSSFNSALNSSVTLFTLDIYRPIFKPNSTDEELVHVGKKFGAILAIISMVIAPLIINA
PSGLYNYLQECNGFYNVPILAAILVGFFSKKVPSIAPKIALVFHIIFYSISKIVWGHVNFLHVLGFLFPACVVVMLIIGK
IKPRENDYVQKYTKQVDITPWSKSKLVSIVISILMICVYILFSKIGIVCK
>Mature_529_residues
SIITCISFVTFTALVAVLSWYKTRNDDLSSQDGYFLAGRSLTGVFIGGSLMLTNLSTEQMVGLNGQGYKYTMAVMAWEVT
SAFALVLMSQVFLPRYLKSGITTIPDFLEERYDSCTRRIISILFLIGYMAAYLPTVLYSGAVVLNSIFNVPEVFGIGQMQ
ALIMTVWAIGIVGSIYAIFGGLKAVAVSDTYNGVGLLIGGFMITVFALIKLGGGSLAQGVDTLITVHPEKLNSIGGADSP
VPWTVLFTGMLFNNLFYWCTNQSIVQRTFGAKNLAEGQKGVLLAGFFKLFGPLYLVLPGIIAFHLYGGSLSNQDMAYPTL
VVDVLPKSLAGFFAAVLFGAILSSFNSALNSSVTLFTLDIYRPIFKPNSTDEELVHVGKKFGAILAIISMVIAPLIINAP
SGLYNYLQECNGFYNVPILAAILVGFFSKKVPSIAPKIALVFHIIFYSISKIVWGHVNFLHVLGFLFPACVVVMLIIGKI
KPRENDYVQKYTKQVDITPWSKSKLVSIVISILMICVYILFSKIGIVCK

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=457, Percent_Identity=31.0722100656455, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI4507031, Length=438, Percent_Identity=31.5068493150685, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI17941285, Length=451, Percent_Identity=28.159645232816, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI14140236, Length=435, Percent_Identity=27.5862068965517, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI4507033, Length=466, Percent_Identity=30.2575107296137, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI206597483, Length=444, Percent_Identity=31.3063063063063, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI109659836, Length=453, Percent_Identity=28.476821192053, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI206597487, Length=469, Percent_Identity=28.3582089552239, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI109659839, Length=469, Percent_Identity=28.1449893390192, Blast_Score=159, Evalue=8e-39,
Organism=Homo sapiens, GI167466278, Length=362, Percent_Identity=26.2430939226519, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI157671931, Length=417, Percent_Identity=23.9808153477218, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4507035, Length=419, Percent_Identity=24.1050119331742, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI256985183, Length=375, Percent_Identity=25.3333333333333, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1790113, Length=527, Percent_Identity=53.7001897533207, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI87082237, Length=403, Percent_Identity=26.302729528536, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115533094, Length=378, Percent_Identity=23.015873015873, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28573698, Length=406, Percent_Identity=23.6453201970443, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI161076631, Length=369, Percent_Identity=25.4742547425474, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641117, Length=338, Percent_Identity=22.7810650887574, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19920916, Length=379, Percent_Identity=24.2744063324538, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24645928, Length=353, Percent_Identity=24.6458923512748, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221459584, Length=378, Percent_Identity=24.8677248677249, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24651739, Length=367, Percent_Identity=22.8882833787466, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281364280, Length=365, Percent_Identity=25.4794520547945, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 57799; Mature: 57668

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIITCISFVTFTALVAVLSWYKTRNDDLSSQDGYFLAGRSLTGVFIGGSLMLTNLSTEQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCEEEEECCCHHH
MVGLNGQGYKYTMAVMAWEVTSAFALVLMSQVFLPRYLKSGITTIPDFLEERYDSCTRRI
HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISILFLIGYMAAYLPTVLYSGAVVLNSIFNVPEVFGIGQMQALIMTVWAIGIVGSIYAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GGLKAVAVSDTYNGVGLLIGGFMITVFALIKLGGGSLAQGVDTLITVHPEKLNSIGGADS
CCHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECHHHHHHCCCCCC
PVPWTVLFTGMLFNNLFYWCTNQSIVQRTFGAKNLAEGQKGVLLAGFFKLFGPLYLVLPG
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IIAFHLYGGSLSNQDMAYPTLVVDVLPKSLAGFFAAVLFGAILSSFNSALNSSVTLFTLD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH
IYRPIFKPNSTDEELVHVGKKFGAILAIISMVIAPLIINAPSGLYNYLQECNGFYNVPIL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
AAILVGFFSKKVPSIAPKIALVFHIIFYSISKIVWGHVNFLHVLGFLFPACVVVMLIIGK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IKPRENDYVQKYTKQVDITPWSKSKLVSIVISILMICVYILFSKIGIVCK
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIITCISFVTFTALVAVLSWYKTRNDDLSSQDGYFLAGRSLTGVFIGGSLMLTNLSTEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCEEEEECCCHHH
MVGLNGQGYKYTMAVMAWEVTSAFALVLMSQVFLPRYLKSGITTIPDFLEERYDSCTRRI
HCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISILFLIGYMAAYLPTVLYSGAVVLNSIFNVPEVFGIGQMQALIMTVWAIGIVGSIYAIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GGLKAVAVSDTYNGVGLLIGGFMITVFALIKLGGGSLAQGVDTLITVHPEKLNSIGGADS
CCHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECHHHHHHCCCCCC
PVPWTVLFTGMLFNNLFYWCTNQSIVQRTFGAKNLAEGQKGVLLAGFFKLFGPLYLVLPG
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IIAFHLYGGSLSNQDMAYPTLVVDVLPKSLAGFFAAVLFGAILSSFNSALNSSVTLFTLD
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEH
IYRPIFKPNSTDEELVHVGKKFGAILAIISMVIAPLIINAPSGLYNYLQECNGFYNVPIL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH
AAILVGFFSKKVPSIAPKIALVFHIIFYSISKIVWGHVNFLHVLGFLFPACVVVMLIIGK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IKPRENDYVQKYTKQVDITPWSKSKLVSIVISILMICVYILFSKIGIVCK
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]