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The map label for this gene is iolB [H]

Identifier: 28210251

GI number: 28210251

Start: 516004

End: 516792

Strand: Direct

Name: iolB [H]

Synonym: CTC00509

Alternate gene names: 28210251

Gene position: 516004-516792 (Clockwise)

Preceding gene: 28210250

Following gene: 28210252

Centisome position: 18.43

GC content: 32.57

Gene sequence:

>789_bases
ATGCTTGAAAAACTTAAAGAACTAGAGAAAGGGCATAATATTTTAGTAGAATCTAATGGAAAACATAGTGAAATGATGAT
GGATATAAGTATATGTAAATTAGAAATTGGACAGGAAGAGTTTTTTATAGAAAAAAATAAAGAAAGTTCATTTTTATTAC
TTTTAGGTAAGGTGTTAATTAAATGGGAAGATAAAGAACAGGAAATAGAAAGAAATTCTTTATTTGATGAAGACCCTTGG
TGCTTACATGTACCTAAAGGTGTAAACGTTAAAATTACAGCTTTGACTGATGCGGAAGTGTTGGTTCAAAAAACAGAAAA
CTCTAGAGTTTTTTCATGTAAATTATACTCCCCAAAAGAGTGCAGAAGTGATGTATTTGGTAATGGAGTTTGGAATGACA
CAGCCAGAAGAATTGTAAGAACAGTTTTTGACTATTCAAATGCACCCTATTCAAATATGGTAATGGGAGAAGTAATAACT
TATCCAGGCAAATGGTCAAGTTATATTCCACACCATCATCCACAACCAGAAGTGTATTATTACAGATTTAATAAACCTCA
AGGGTTTGGATGTGCATTTATAGGAGAAGAAGCTTATAAAATTACAGATAATTCTATAGCAACTATTCCAGGGGGACTAG
TGCACCCTCAAACATCTGCACCAGGTTATGCAATGTATTATTGTTGGATGATAAGACATTTAGAAAACAATCCTTGGACA
GATAGGATTAATGAAAAAGAGCATGAGTGGCTTTTAGAATCAGATGTTAAGATTTGGCCTCAACAATAG

Upstream 100 bases:

>100_bases
CAGTTGTTCTGAGGCTATGCCTAAAGTAGAAGAAATTAAACAATTTATAAAAGAAAAAAAAGAAGAACATGGTGAGATGG
TAGTAAGGGGGTAATAATTA

Downstream 100 bases:

>100_bases
TAAAAGGAGGAATTATGGTGGAAACTATCAAGATAACAACTGCTCAAGCACTTATAAAATTTTTAAATCAACAATATGTA
GAATTAGATGGACAGGAGTA

Product: myo-inositol catabolism protein iolB

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MLEKLKELEKGHNILVESNGKHSEMMMDISICKLEIGQEEFFIEKNKESSFLLLLGKVLIKWEDKEQEIERNSLFDEDPW
CLHVPKGVNVKITALTDAEVLVQKTENSRVFSCKLYSPKECRSDVFGNGVWNDTARRIVRTVFDYSNAPYSNMVMGEVIT
YPGKWSSYIPHHHPQPEVYYYRFNKPQGFGCAFIGEEAYKITDNSIATIPGGLVHPQTSAPGYAMYYCWMIRHLENNPWT
DRINEKEHEWLLESDVKIWPQQ

Sequences:

>Translated_262_residues
MLEKLKELEKGHNILVESNGKHSEMMMDISICKLEIGQEEFFIEKNKESSFLLLLGKVLIKWEDKEQEIERNSLFDEDPW
CLHVPKGVNVKITALTDAEVLVQKTENSRVFSCKLYSPKECRSDVFGNGVWNDTARRIVRTVFDYSNAPYSNMVMGEVIT
YPGKWSSYIPHHHPQPEVYYYRFNKPQGFGCAFIGEEAYKITDNSIATIPGGLVHPQTSAPGYAMYYCWMIRHLENNPWT
DRINEKEHEWLLESDVKIWPQQ
>Mature_262_residues
MLEKLKELEKGHNILVESNGKHSEMMMDISICKLEIGQEEFFIEKNKESSFLLLLGKVLIKWEDKEQEIERNSLFDEDPW
CLHVPKGVNVKITALTDAEVLVQKTENSRVFSCKLYSPKECRSDVFGNGVWNDTARRIVRTVFDYSNAPYSNMVMGEVIT
YPGKWSSYIPHHHPQPEVYYYRFNKPQGFGCAFIGEEAYKITDNSIATIPGGLVHPQTSAPGYAMYYCWMIRHLENNPWT
DRINEKEHEWLLESDVKIWPQQ

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30517; Mature: 30517

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKLKELEKGHNILVESNGKHSEMMMDISICKLEIGQEEFFIEKNKESSFLLLLGKVLI
CCHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCHHEEEEEHHE
KWEDKEQEIERNSLFDEDPWCLHVPKGVNVKITALTDAEVLVQKTENSRVFSCKLYSPKE
EECCHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCHHH
CRSDVFGNGVWNDTARRIVRTVFDYSNAPYSNMVMGEVITYPGKWSSYIPHHHPQPEVYY
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHEEECCCCCCCCCCCCCCCCCEEE
YRFNKPQGFGCAFIGEEAYKITDNSIATIPGGLVHPQTSAPGYAMYYCWMIRHLENNPWT
EEECCCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DRINEKEHEWLLESDVKIWPQQ
CCCCCCHHHHHCCCCCEECCCC
>Mature Secondary Structure
MLEKLKELEKGHNILVESNGKHSEMMMDISICKLEIGQEEFFIEKNKESSFLLLLGKVLI
CCHHHHHHHCCCEEEEECCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCHHEEEEEHHE
KWEDKEQEIERNSLFDEDPWCLHVPKGVNVKITALTDAEVLVQKTENSRVFSCKLYSPKE
EECCHHHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCHHH
CRSDVFGNGVWNDTARRIVRTVFDYSNAPYSNMVMGEVITYPGKWSSYIPHHHPQPEVYY
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHEEECCCCCCCCCCCCCCCCCEEE
YRFNKPQGFGCAFIGEEAYKITDNSIATIPGGLVHPQTSAPGYAMYYCWMIRHLENNPWT
EEECCCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
DRINEKEHEWLLESDVKIWPQQ
CCCCCCHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA