| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is iolD [H]
Identifier: 28210252
GI number: 28210252
Start: 516777
End: 518744
Strand: Direct
Name: iolD [H]
Synonym: CTC00510
Alternate gene names: 28210252
Gene position: 516777-518744 (Clockwise)
Preceding gene: 28210251
Following gene: 28210253
Centisome position: 18.46
GC content: 33.33
Gene sequence:
>1968_bases TTGGCCTCAACAATAGTAAAAGGAGGAATTATGGTGGAAACTATCAAGATAACAACTGCTCAAGCACTTATAAAATTTTT AAATCAACAATATGTAGAATTAGATGGACAGGAGTATAGATTTGTACAAGGAATTTTCACAATATTCGGACACGGCAATG TTTTAGGAATAGGACAAGCACTAGAAGAAGATCCAGGTCATTTAGAAGTTTATCAAGGACATAACGAACAGGGAATGGCT CAATCAGCTATAGCCTTTGCAAAACAAAGTAATAGAAAACAAATATATGCGTGCACATCATCTGTTGGACCAGGTGCTGC TAATATGGTAACAGCAGCGGCTACAGCTACAGCAAATAATATACCTGTATTGTTGTTACCAGGGGATACTTTTTCAACAA GACAACCAGATCCAGTGCTCCAACAGGTAGAGCAAACATATAACTTATCTATTACTACCAATGATGCCTTTAAGGCAGTA AGCAAATATTGGGACAGAGTAAATAGACCAGAACAGCTTATGACAGCTATGATAAATGCTATGAGAGTATTAACAGATCC TGCAAATACAGGAGCAGTAACCATAGCATTACCTCAAGATGTGCAAGGAGAAATTTATGATTTCCCAGAATATTTTTTTA AAAAACGTGTTCATAGAATAGAAAGAACACCTCCTTCAAAACAAGCCATAGAAGATGCTGTAGAGCTTATAAAAAGAAAA AAGAAGCCATTAATAATATGTGGTGGTGGTGTTAGGTATTCAGAAGCAGCAGAATCACTTAAAAGATTTTCAGAAAAGTT TAATATTCCTTTTGGAGAGACGCAGGCGGGTAAAAGTGCAATTGAGTGGAGTTATGGATTAAATCTAGGAGGAATAGGGG TAACTGGAAATTCTGCAGCTAATAGTATAGCAAAAGATGCAGACTTGATAATAGGAGTAGGAACTAGATTTACTGATTTT ACAACTTGTTCAAAGTTTTTATTTCAAAATGATGATGTAGAGTTTTTAACTATAAATATATCTAGTTTCCATGCTAATAA ATTAGATGCGCTAAAAGTTATTTCAGATGCAAAAGTAGGACTAGATACAATAGCAAATGAGCTAGAAAGACAAGGATATT CTTCAGATTATGAAGATGAAATAAAAAAAGCTAAAAATGAATGGGAAAAAGAACTTAATAGGCTTTTTAATATAGAGTAT ACAGAAAAAGAGTTTGTACCTGAAATAGCAGGTCATTGTGATAAGGTAGTAGAGGAGTTTTATAAAGAATTTGATTCCTG TTTAACACAGACAAAGGTTTTGGGAGAACTAAATGAGCTTTTAGATGATGATGCAATTGTAATAGGAGCTTCGGGAAGCT TACCAGGAGACCTACATAAGGTATGGTGTCCTAAAAGGAGTAATACTTATCATATGGAGTATGGATATTCTTGTATGGGG TATGAAGTTTCTGCTGCATTAGGAGTTAAATTGGCAGAAGAAGATAAGGAGGTTTATTCCTTGGTAGGAGATGGAGCGTA TTTAATGCTTCACTCGGAGTTAATTACTAGTATAAAAGAAGGAAAGAAAATAAATATATTGTTGTTTGACAATGCAGGTT TTGGATGTATAAATAATCTTCAAATGTCTAATGGTATGGGAAGCTTTGCTACTGAATTTAGACATAGGAATAGTGAAACA GGAAAACTTGATGGAAAGCTTTTAAAAATTGATTTTGCAAAATCTGCTGAAGGATATGGGGTTAAAACTTATAAAGTAAA TACAATAGATAAGCTTAGATATGCAATAGAAGATTCTAAAAAGCAAAAAATATCTACATTAATTGATATAAAAATACTAC CTAAAACTATGACAAGGGGATATGAATCCTGGTGGCATGTTGGGGTATCAGAAAAATCAAAAAATCCTAAAATAAATAAA GCGTATGAAAGTAAAATAAACCATTTAGCCAAAGCTAGAAAATATTAA
Upstream 100 bases:
>100_bases TGTATTATTGTTGGATGATAAGACATTTAGAAAACAATCCTTGGACAGATAGGATTAATGAAAAAGAGCATGAGTGGCTT TTAGAATCAGATGTTAAGAT
Downstream 100 bases:
>100_bases ATCAATAATAATTTAATTCAAAGATAAAAAAGGGGATGAAGGTAATGATTAATTTAGGAGTTATTGGATTTGGAAGAATA GGTAAGGTACATGCAGAAAG
Product: myo-inositol catabolism protein iolD
Products: pyruvate; 2-aceto-2-hydroxy-butyrate; CO2 [C]
Alternate protein names: THcHDO hydrolase [H]
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MASTIVKGGIMVETIKITTAQALIKFLNQQYVELDGQEYRFVQGIFTIFGHGNVLGIGQALEEDPGHLEVYQGHNEQGMA QSAIAFAKQSNRKQIYACTSSVGPGAANMVTAAATATANNIPVLLLPGDTFSTRQPDPVLQQVEQTYNLSITTNDAFKAV SKYWDRVNRPEQLMTAMINAMRVLTDPANTGAVTIALPQDVQGEIYDFPEYFFKKRVHRIERTPPSKQAIEDAVELIKRK KKPLIICGGGVRYSEAAESLKRFSEKFNIPFGETQAGKSAIEWSYGLNLGGIGVTGNSAANSIAKDADLIIGVGTRFTDF TTCSKFLFQNDDVEFLTINISSFHANKLDALKVISDAKVGLDTIANELERQGYSSDYEDEIKKAKNEWEKELNRLFNIEY TEKEFVPEIAGHCDKVVEEFYKEFDSCLTQTKVLGELNELLDDDAIVIGASGSLPGDLHKVWCPKRSNTYHMEYGYSCMG YEVSAALGVKLAEEDKEVYSLVGDGAYLMLHSELITSIKEGKKINILLFDNAGFGCINNLQMSNGMGSFATEFRHRNSET GKLDGKLLKIDFAKSAEGYGVKTYKVNTIDKLRYAIEDSKKQKISTLIDIKILPKTMTRGYESWWHVGVSEKSKNPKINK AYESKINHLAKARKY
Sequences:
>Translated_655_residues MASTIVKGGIMVETIKITTAQALIKFLNQQYVELDGQEYRFVQGIFTIFGHGNVLGIGQALEEDPGHLEVYQGHNEQGMA QSAIAFAKQSNRKQIYACTSSVGPGAANMVTAAATATANNIPVLLLPGDTFSTRQPDPVLQQVEQTYNLSITTNDAFKAV SKYWDRVNRPEQLMTAMINAMRVLTDPANTGAVTIALPQDVQGEIYDFPEYFFKKRVHRIERTPPSKQAIEDAVELIKRK KKPLIICGGGVRYSEAAESLKRFSEKFNIPFGETQAGKSAIEWSYGLNLGGIGVTGNSAANSIAKDADLIIGVGTRFTDF TTCSKFLFQNDDVEFLTINISSFHANKLDALKVISDAKVGLDTIANELERQGYSSDYEDEIKKAKNEWEKELNRLFNIEY TEKEFVPEIAGHCDKVVEEFYKEFDSCLTQTKVLGELNELLDDDAIVIGASGSLPGDLHKVWCPKRSNTYHMEYGYSCMG YEVSAALGVKLAEEDKEVYSLVGDGAYLMLHSELITSIKEGKKINILLFDNAGFGCINNLQMSNGMGSFATEFRHRNSET GKLDGKLLKIDFAKSAEGYGVKTYKVNTIDKLRYAIEDSKKQKISTLIDIKILPKTMTRGYESWWHVGVSEKSKNPKINK AYESKINHLAKARKY >Mature_654_residues ASTIVKGGIMVETIKITTAQALIKFLNQQYVELDGQEYRFVQGIFTIFGHGNVLGIGQALEEDPGHLEVYQGHNEQGMAQ SAIAFAKQSNRKQIYACTSSVGPGAANMVTAAATATANNIPVLLLPGDTFSTRQPDPVLQQVEQTYNLSITTNDAFKAVS KYWDRVNRPEQLMTAMINAMRVLTDPANTGAVTIALPQDVQGEIYDFPEYFFKKRVHRIERTPPSKQAIEDAVELIKRKK KPLIICGGGVRYSEAAESLKRFSEKFNIPFGETQAGKSAIEWSYGLNLGGIGVTGNSAANSIAKDADLIIGVGTRFTDFT TCSKFLFQNDDVEFLTINISSFHANKLDALKVISDAKVGLDTIANELERQGYSSDYEDEIKKAKNEWEKELNRLFNIEYT EKEFVPEIAGHCDKVVEEFYKEFDSCLTQTKVLGELNELLDDDAIVIGASGSLPGDLHKVWCPKRSNTYHMEYGYSCMGY EVSAALGVKLAEEDKEVYSLVGDGAYLMLHSELITSIKEGKKINILLFDNAGFGCINNLQMSNGMGSFATEFRHRNSETG KLDGKLLKIDFAKSAEGYGVKTYKVNTIDKLRYAIEDSKKQKISTLIDIKILPKTMTRGYESWWHVGVSEKSKNPKINKA YESKINHLAKARKY
Specific function: Involved in the cleavage of the C1-C2 bond of 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG) [H]
COG id: COG3962
COG function: function code E; Acetolactate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=565, Percent_Identity=19.8230088495575, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790104, Length=613, Percent_Identity=23.8172920065253, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1786717, Length=525, Percent_Identity=25.3333333333333, Blast_Score=116, Evalue=6e-27, Organism=Escherichia coli, GI87081685, Length=584, Percent_Identity=24.8287671232877, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1788716, Length=530, Percent_Identity=21.6981132075472, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787096, Length=527, Percent_Identity=20.6831119544592, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323755, Length=619, Percent_Identity=24.232633279483, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI19922626, Length=595, Percent_Identity=20, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: 2.2.1.6 [C]
Molecular weight: Translated: 72818; Mature: 72686
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTIVKGGIMVETIKITTAQALIKFLNQQYVELDGQEYRFVQGIFTIFGHGNVLGIGQA CCCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCHH LEEDPGHLEVYQGHNEQGMAQSAIAFAKQSNRKQIYACTSSVGPGAANMVTAAATATANN HHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC IPVLLLPGDTFSTRQPDPVLQQVEQTYNLSITTNDAFKAVSKYWDRVNRPEQLMTAMINA CEEEEECCCCCCCCCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHH MRVLTDPANTGAVTIALPQDVQGEIYDFPEYFFKKRVHRIERTPPSKQAIEDAVELIKRK HHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC KKPLIICGGGVRYSEAAESLKRFSEKFNIPFGETQAGKSAIEWSYGLNLGGIGVTGNSAA CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEECCCCHHH NSIAKDADLIIGVGTRFTDFTTCSKFLFQNDDVEFLTINISSFHANKLDALKVISDAKVG HHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCC LDTIANELERQGYSSDYEDEIKKAKNEWEKELNRLFNIEYTEKEFVPEIAGHCDKVVEEF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YKEFDSCLTQTKVLGELNELLDDDAIVIGASGSLPGDLHKVWCPKRSNTYHMEYGYSCMG HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCEEEC YEVSAALGVKLAEEDKEVYSLVGDGAYLMLHSELITSIKEGKKINILLFDNAGFGCINNL EEEHHHHCCEEHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCC QMSNGMGSFATEFRHRNSETGKLDGKLLKIDFAKSAEGYGVKTYKVNTIDKLRYAIEDSK CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHH KQKISTLIDIKILPKTMTRGYESWWHVGVSEKSKNPKINKAYESKINHLAKARKY HHHHHHHEEEEEECHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASTIVKGGIMVETIKITTAQALIKFLNQQYVELDGQEYRFVQGIFTIFGHGNVLGIGQA CCCEEECCEEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCHH LEEDPGHLEVYQGHNEQGMAQSAIAFAKQSNRKQIYACTSSVGPGAANMVTAAATATANN HHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC IPVLLLPGDTFSTRQPDPVLQQVEQTYNLSITTNDAFKAVSKYWDRVNRPEQLMTAMINA CEEEEECCCCCCCCCCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHH MRVLTDPANTGAVTIALPQDVQGEIYDFPEYFFKKRVHRIERTPPSKQAIEDAVELIKRK HHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC KKPLIICGGGVRYSEAAESLKRFSEKFNIPFGETQAGKSAIEWSYGLNLGGIGVTGNSAA CCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEECCCCHHH NSIAKDADLIIGVGTRFTDFTTCSKFLFQNDDVEFLTINISSFHANKLDALKVISDAKVG HHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCC LDTIANELERQGYSSDYEDEIKKAKNEWEKELNRLFNIEYTEKEFVPEIAGHCDKVVEEF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH YKEFDSCLTQTKVLGELNELLDDDAIVIGASGSLPGDLHKVWCPKRSNTYHMEYGYSCMG HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEEECCCEEEC YEVSAALGVKLAEEDKEVYSLVGDGAYLMLHSELITSIKEGKKINILLFDNAGFGCINNL EEEHHHHCCEEHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCC QMSNGMGSFATEFRHRNSETGKLDGKLLKIDFAKSAEGYGVKTYKVNTIDKLRYAIEDSK CCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHH KQKISTLIDIKILPKTMTRGYESWWHVGVSEKSKNPKINKAYESKINHLAKARKY HHHHHHHEEEEEECHHHHCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Mg2+ [C]
Kcat value (1/min): 4002 [C]
Specific activity: 53
Km value (mM): 5 {2-oxobutanoate}} 1 {2-oxobutanoate}} 7.6 {pyruvate}} 7 {pyruvate}} 2.9 {pyruvate}} 2.6 {pyruvate}} 1.3 {pyruvate}} 1 {pyruvate}} [C]
Substrates: acetolactate; CO2; pyruvate; 2-oxobutanoate [C]
Specific reaction: acetolactate + CO2 = 2 pyruvate pyruvate + 2-oxobutanoate = 2-aceto-2-hydroxy-butyrate + CO2 [C]
General reaction: C-C bond formation; decarboxylation [C]
Inhibitor: @OXOB02.txt*2-oxobutanoate!; chlorimuronethyl; chlorsulphuron; Ile; imazapyr; Leu; Val [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]