| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is iolJ [H]
Identifier: 28210249
GI number: 28210249
Start: 514113
End: 514958
Strand: Direct
Name: iolJ [H]
Synonym: CTC00507
Alternate gene names: 28210249
Gene position: 514113-514958 (Clockwise)
Preceding gene: 28210248
Following gene: 28210250
Centisome position: 18.37
GC content: 31.32
Gene sequence:
>846_bases ATGTCGATTGTAAAAATGAAACAACTTTTAAAAAATGCTCAAAAAGGTCAGTATGGAATAGGGGCTTTTAGTATATCCAA CATGGAAACCATTATTGGAGCTGTAAGAGCAGCTGAGGAGTTAAAATCTCCAATAATACTTCAAATTGCGGAATCTAGAC TAAAGCATTCGCCCCTTTACTTAATAGGACCGGTAATGATTGAAGCAGCTAAAAAATCATCTGTTCCAATAGCGGTACAT TTAGATCATGGCGAAAGCATTGATACCATAAAAGAAGCTTTAGATTTAGGTTTTACTTCTGTAATGTATGACGGTTCTCA TTTTAATTTAAGTAAAAACATTGAAAACACAAAAGAAGTTGTAAGTTTAACTAAAGAATATGGAGCTTCTGTAGAAGGAG AAGTTGGAAAGGTTGGAAAAAAAGAAGATGGTTTAGGAGATGACACTATATCAATAACAACTGTAGAAGATGCGGAAAAG TTTTATAAAGAGACAAATGTAGATGCTTTAGCTATAGCTATTGGAAATGTTCATGGTATGTATGTTGGGAAACCTAATCT TGACATCAAAAGGTTAATAGAGGTTAATAGTAATATAGAAGTGCCTTTAGTTTTACATGGTGGATCAGGTATTACAAAAG AGGAGTTTAAAAATTGTATTAAAAACGGTATAACCAAAATAAATGTAGCCACAGCAACTTTTAATAGTGTGATAGATAAG GTAAATGAATTATTTAAAACTTCTAATTCAGTTGATTACTTTACTTATCATGATGTTGTTATTAATGCAGCCTATGATAA CGTAAAAAAACATATAGACATATTTGGTAGTAGTAACAAAGCATAA
Upstream 100 bases:
>100_bases AAGATATTGTTAATATATATAAACAGTTGTATATATAAAGAATTGAGAAGTTAAAGTTCTTATATTCCTAATATGGTTTT GAGAAAAAGGAGTAAATATC
Downstream 100 bases:
>100_bases ATTTTAAGGGGGTATTTTAGTGAATTATATTAAGTTTGACGAAAAAAAACCACTAGATGTAATTCCTATTGGAAGGGTAA CCATAGATTTTAATCCTAAT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: DKGP aldolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSIVKMKQLLKNAQKGQYGIGAFSISNMETIIGAVRAAEELKSPIILQIAESRLKHSPLYLIGPVMIEAAKKSSVPIAVH LDHGESIDTIKEALDLGFTSVMYDGSHFNLSKNIENTKEVVSLTKEYGASVEGEVGKVGKKEDGLGDDTISITTVEDAEK FYKETNVDALAIAIGNVHGMYVGKPNLDIKRLIEVNSNIEVPLVLHGGSGITKEEFKNCIKNGITKINVATATFNSVIDK VNELFKTSNSVDYFTYHDVVINAAYDNVKKHIDIFGSSNKA
Sequences:
>Translated_281_residues MSIVKMKQLLKNAQKGQYGIGAFSISNMETIIGAVRAAEELKSPIILQIAESRLKHSPLYLIGPVMIEAAKKSSVPIAVH LDHGESIDTIKEALDLGFTSVMYDGSHFNLSKNIENTKEVVSLTKEYGASVEGEVGKVGKKEDGLGDDTISITTVEDAEK FYKETNVDALAIAIGNVHGMYVGKPNLDIKRLIEVNSNIEVPLVLHGGSGITKEEFKNCIKNGITKINVATATFNSVIDK VNELFKTSNSVDYFTYHDVVINAAYDNVKKHIDIFGSSNKA >Mature_280_residues SIVKMKQLLKNAQKGQYGIGAFSISNMETIIGAVRAAEELKSPIILQIAESRLKHSPLYLIGPVMIEAAKKSSVPIAVHL DHGESIDTIKEALDLGFTSVMYDGSHFNLSKNIENTKEVVSLTKEYGASVEGEVGKVGKKEDGLGDDTISITTVEDAEKF YKETNVDALAIAIGNVHGMYVGKPNLDIKRLIEVNSNIEVPLVLHGGSGITKEEFKNCIKNGITKINVATATFNSVIDKV NELFKTSNSVDYFTYHDVVINAAYDNVKKHIDIFGSSNKA
Specific function: Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP) [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family. IolJ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=283, Percent_Identity=36.7491166077738, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI87082041, Length=284, Percent_Identity=35.9154929577465, Blast_Score=174, Evalue=4e-45, Organism=Escherichia coli, GI1788072, Length=282, Percent_Identity=32.9787234042553, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI1789293, Length=293, Percent_Identity=25.5972696245734, Blast_Score=69, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322790, Length=273, Percent_Identity=27.1062271062271, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.29 [H]
Molecular weight: Translated: 30576; Mature: 30445
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVKMKQLLKNAQKGQYGIGAFSISNMETIIGAVRAAEELKSPIILQIAESRLKHSPLY CCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCEE LIGPVMIEAAKKSSVPIAVHLDHGESIDTIKEALDLGFTSVMYDGSHFNLSKNIENTKEV EEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCEECCCCHHHHHH VSLTKEYGASVEGEVGKVGKKEDGLGDDTISITTVEDAEKFYKETNVDALAIAIGNVHGM HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEECCCCEE YVGKPNLDIKRLIEVNSNIEVPLVLHGGSGITKEEFKNCIKNGITKINVATATFNSVIDK EECCCCCCHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHH VNELFKTSNSVDYFTYHDVVINAAYDNVKKHIDIFGSSNKA HHHHHHCCCCCEEEEEEHEEEEHHHHHHHHHEEECCCCCCC >Mature Secondary Structure SIVKMKQLLKNAQKGQYGIGAFSISNMETIIGAVRAAEELKSPIILQIAESRLKHSPLY CHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCEE LIGPVMIEAAKKSSVPIAVHLDHGESIDTIKEALDLGFTSVMYDGSHFNLSKNIENTKEV EEHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEECCCCCEECCCCHHHHHH VSLTKEYGASVEGEVGKVGKKEDGLGDDTISITTVEDAEKFYKETNVDALAIAIGNVHGM HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEECCCCEE YVGKPNLDIKRLIEVNSNIEVPLVLHGGSGITKEEFKNCIKNGITKINVATATFNSVIDK EECCCCCCHHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHH VNELFKTSNSVDYFTYHDVVINAAYDNVKKHIDIFGSSNKA HHHHHHCCCCCEEEEEEHEEEEHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA