| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is inlA [H]
Identifier: 28210241
GI number: 28210241
Start: 503151
End: 505238
Strand: Direct
Name: inlA [H]
Synonym: CTC00495
Alternate gene names: 28210241
Gene position: 503151-505238 (Clockwise)
Preceding gene: 28210240
Following gene: 28210245
Centisome position: 17.97
GC content: 27.78
Gene sequence:
>2088_bases ATGAATAAGAAAAAAATTACTATAATAACTGCTGTAGCTTTAACTTGTGCTCTTAGTTTTTCTGTTTTAGCTTCTTATCC TAATGAAGATAAGGCTTTAAGTAAAGGTGGAGTGGGAAAAGTTTTTGCTTTGGCAAGTTTAAATGAAAACAATATAAAAT TCCCAGATAAAAATTTAGATATTGCTATAAGAGAGGCTACCAATAAAGAGCCTGATGCGACTCTTACTAAAAACGATTTT AAAATGGTAACCAAGCTTAATTTAAAAAGTAAAAATATAAAAGATATTTCAGGATTAGAGTTTTTTGAAAATCTTCAAAG TTTAGATTTAAGTAATAATGAGATAAAAGATTTAGGATCTTTAAGTGGTTTGAAGTATTTAAAAGAACTAACCCTATATA AAAACAAAATAACAGATGTAAAAGCCTTAGACGGCCTAAAGAATTTAGAAAAGCTTAATCTAAGAGATAATAAGGTTAAG AATATAGAAGGATTAAAAGGTTTAGAAAAATTAAGAGAATTAGATTTAGGTAAAAACTCTGTATTTCAACCAAAGCCTCT TAAGGATTTGAAGAACTTGAGAATACTTAATTTAGAAAGTAATGGTATAGGCAATGCAGAGGATTTAGAAGAATTAAAGC AAGTAGAACATTTAATTTTAAGTAATAATACTGTTGATGATGTGGAACCACTACTTACATTAACTAATGTAAATAAGCTT TATTTAGATGATAATCCAGTTACACATATAGGAAAGCTTAAAGACATGACAAATCTAAAGAGACTTAATATAAACAACGA TAGCATAGAGGATTTAGCAGAGCTTAAGAAGTTTAAAAATCTTCAGTGGTTAAAGTTTAAAAATCAGGAAATGGTATTGG ATAATAAGAAATTAAATGATTTACTAGTAGATCCAAATAAAGAAGTTAAATTTGCAGATAAGAATTTAGAATTTGCTATA AGAGATAAAATAGAGAAACCAAAAGGAGCAATAAAAAAGGCGGATTTGCAAAGGGTAACTCAACTAGATTTATGGGATAA AAATGTTACGAATCTAGCAGGTATAGAAAACCTAATAGATTTAAGGGTTTTAAATGCTGGTAAAAATAATATAAGTAATT TGGAACCATTGAAATCTATGGACAACTTAGAAAATTTATATTTAACTAAAACTAAAGTTGTAAGTCTTGAACCTTTAAGA GGATTAACTAATTTAAAAGCATTAGTTATAAATGAAACAAATGTATCTGATTTAACTCCTATTAAGAATTTAATTAATTT AGAAAGACTTACACTAGGAGATAATAAATTAGTATCCCTAGCGGGAATAGAGAATTTAGTTAACTTAGAATCTCTAGATA TAAATAAAAATAATGTAAGTAATTTAGCTTCAATTAGAGATTTAACTAACTTAAAGTCATTAAATATTAATGAAAACAAT GTAACAGATTTAAGTGTAGTTACAAACTTAAAGAATCTAGAGAGAATTTCTTTAAATAAAAATGGAGTGACTAGTCTAGG AGCCTTAGCGGCATTACCAGAGCTTGAATGGGTTACAGCTAAGGAAAATGGATTAACAAGCACTGTAGGATTACAAAATG CGTTAAAGCTTAAAGAACTATTTTTAGATAGTAACCAAATATCTGATTTATCATCTTTAGCTAATTTAACATCTTTAGAA ACTTTAAGTCTAAGAACAAATAATATAAGTGATGTAAGTTCTCTAAGTGATTTAACAAGAATGAAGAATTTATATTTGCA TAAAAACAATATAGGAAGTATTGCTCCACTTGCAAGTATGGAAAATTTAACAAGACTTTATGTTGGTAAGAATAATATTT CAGATATAAGTGCAGTAGCAAACATGAAGAATTTAAAAACACTATCTATTGGAGAGAATATGGTATCCAATATAGGACCT GTATCAGGATTACAAAGTTTAGAGACTCTTGATGTAGCAGATAACTTTATTACAGATGCTAGCCCAGCTATAGGATTACC TAATCTTAAGGATATAATGCTTCTAAATACTAAAGTTCCAGAAGCTCAAATAAATGCGTTCCCAGATAGCGTAACAGTGA CCAAATAG
Upstream 100 bases:
>100_bases AATGCTCTTTCAAAAGACGTGAAGGTAGTTTATTAAGACTATCTGTGTAATTTAGTGTATTAACTAACGGAGGTGAAACT GGTTAAATACCAGAAAGCAT
Downstream 100 bases:
>100_bases GCGACAAATAGGGGACGGTTAATAAAAACTAAACCTCAAAAGCAGGAATTGCTTTTGGGGTTTAATTTTTTCGAACAAAG AAGAGGGGGAAAGGTAAAGG
Product: internalin A-like protein/putative S-layer protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MNKKKITIITAVALTCALSFSVLASYPNEDKALSKGGVGKVFALASLNENNIKFPDKNLDIAIREATNKEPDATLTKNDF KMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVK NIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKL YLDDNPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKFADKNLEFAI RDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLR GLTNLKALVINETNVSDLTPIKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKELFLDSNQISDLSSLANLTSLE TLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASMENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGP VSGLQSLETLDVADNFITDASPAIGLPNLKDIMLLNTKVPEAQINAFPDSVTVTK
Sequences:
>Translated_695_residues MNKKKITIITAVALTCALSFSVLASYPNEDKALSKGGVGKVFALASLNENNIKFPDKNLDIAIREATNKEPDATLTKNDF KMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVK NIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKL YLDDNPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKFADKNLEFAI RDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLR GLTNLKALVINETNVSDLTPIKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKELFLDSNQISDLSSLANLTSLE TLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASMENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGP VSGLQSLETLDVADNFITDASPAIGLPNLKDIMLLNTKVPEAQINAFPDSVTVTK >Mature_695_residues MNKKKITIITAVALTCALSFSVLASYPNEDKALSKGGVGKVFALASLNENNIKFPDKNLDIAIREATNKEPDATLTKNDF KMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVK NIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKL YLDDNPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKFADKNLEFAI RDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLR GLTNLKALVINETNVSDLTPIKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKELFLDSNQISDLSSLANLTSLE TLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASMENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGP VSGLQSLETLDVADNFITDASPAIGLPNLKDIMLLNTKVPEAQINAFPDSVTVTK
Specific function: Mediates the entry of Listeria monocytogenes into cells [H]
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 14 LRR (leucine-rich) repeats [H]
Homologues:
Organism=Homo sapiens, GI4506013, Length=185, Percent_Identity=33.5135135135135, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI206725447, Length=216, Percent_Identity=30.0925925925926, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI42542396, Length=216, Percent_Identity=30.0925925925926, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI55743114, Length=187, Percent_Identity=32.0855614973262, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI40255157, Length=353, Percent_Identity=28.6118980169972, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI209862903, Length=313, Percent_Identity=29.7124600638978, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI61966709, Length=209, Percent_Identity=36.3636363636364, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI120953243, Length=293, Percent_Identity=24.5733788395904, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI238908508, Length=592, Percent_Identity=25, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI120953300, Length=293, Percent_Identity=24.5733788395904, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI62912472, Length=350, Percent_Identity=28.8571428571429, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI194272224, Length=159, Percent_Identity=37.7358490566038, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI194272222, Length=159, Percent_Identity=37.7358490566038, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI62912470, Length=350, Percent_Identity=28.8571428571429, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI194272228, Length=159, Percent_Identity=37.7358490566038, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI194272226, Length=159, Percent_Identity=37.7358490566038, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI157694513, Length=405, Percent_Identity=25.679012345679, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI4758460, Length=304, Percent_Identity=28.6184210526316, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI21389483, Length=200, Percent_Identity=31.5, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI5901898, Length=182, Percent_Identity=29.1208791208791, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI55770895, Length=261, Percent_Identity=29.8850574712644, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI4504379, Length=316, Percent_Identity=27.2151898734177, Blast_Score=67, Evalue=8e-11, Organism=Homo sapiens, GI8923909, Length=255, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=9e-11, Organism=Homo sapiens, GI21361633, Length=280, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=1e-10, Organism=Caenorhabditis elegans, GI71984630, Length=661, Percent_Identity=25.1134644478064, Blast_Score=95, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17536161, Length=203, Percent_Identity=32.512315270936, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17554124, Length=196, Percent_Identity=33.6734693877551, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531555, Length=245, Percent_Identity=27.3469387755102, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17554292, Length=217, Percent_Identity=33.6405529953917, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17554290, Length=217, Percent_Identity=33.6405529953917, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322655, Length=222, Percent_Identity=31.5315315315315, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358617, Length=220, Percent_Identity=30.4545454545455, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI21358607, Length=669, Percent_Identity=24.9626307922272, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI221330678, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726404, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI221379725, Length=374, Percent_Identity=28.0748663101604, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221379722, Length=374, Percent_Identity=28.0748663101604, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI17136634, Length=563, Percent_Identity=25.7548845470693, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24658034, Length=231, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=6e-11, Organism=Drosophila melanogaster, GI281363494, Length=144, Percent_Identity=36.8055555555556, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR019948 - InterPro: IPR014756 - InterPro: IPR001611 - InterPro: IPR013378 - InterPro: IPR019931 - InterPro: IPR012569 - InterPro: IPR001899 [H]
Pfam domain/function: PF09479 Flg_new; PF00746 Gram_pos_anchor; PF00560 LRR_1; PF08191 LRR_adjacent [H]
EC number: NA
Molecular weight: Translated: 76934; Mature: 76934
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKKITIITAVALTCALSFSVLASYPNEDKALSKGGVGKVFALASLNENNIKFPDKNLD CCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC IAIREATNKEPDATLTKNDFKMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGS EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH LSGLKYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVKNIEGLKGLEKLRELDLGKNS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC VFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKL CCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE YLDDNPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLND EECCCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEECCCEEEECCCCCCC LLVDPNKEVKFADKNLEFAIRDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLID EEECCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLRGLTNLKALVINETNVSDLTP EEEECCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHH IKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN HHHHHHHHHEECCCCCEEEEHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCC VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKEL CCHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH FLDSNQISDLSSLANLTSLETLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASM HHCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHH ENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGPVSGLQSLETLDVADNFITDA HHHHEEEECCCCCHHHHHHHHHHCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SPAIGLPNLKDIMLLNTKVPEAQINAFPDSVTVTK CCCCCCCCCCCEEEEECCCCCHHHCCCCCCEEECC >Mature Secondary Structure MNKKKITIITAVALTCALSFSVLASYPNEDKALSKGGVGKVFALASLNENNIKFPDKNLD CCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC IAIREATNKEPDATLTKNDFKMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGS EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH LSGLKYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVKNIEGLKGLEKLRELDLGKNS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC VFQPKPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKL CCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE YLDDNPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQWLKFKNQEMVLDNKKLND EECCCCCCHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEECCCEEEECCCCCCC LLVDPNKEVKFADKNLEFAIRDKIEKPKGAIKKADLQRVTQLDLWDKNVTNLAGIENLID EEECCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVSLEPLRGLTNLKALVINETNVSDLTP EEEECCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHH IKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN HHHHHHHHHEECCCCCEEEEHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCC VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKEL CCHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH FLDSNQISDLSSLANLTSLETLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASM HHCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHH ENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGPVSGLQSLETLDVADNFITDA HHHHEEEECCCCCHHHHHHHHHHCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SPAIGLPNLKDIMLLNTKVPEAQINAFPDSVTVTK CCCCCCCCCCCEEEEECCCCCHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9541569 [H]