| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210236
Identifier: 28210236
GI number: 28210236
Start: 493995
End: 495191
Strand: Direct
Name: 28210236
Synonym: CTC00488
Alternate gene names: NA
Gene position: 493995-495191 (Clockwise)
Preceding gene: 28210235
Following gene: 28210237
Centisome position: 17.65
GC content: 26.32
Gene sequence:
>1197_bases ATGAAGAAAGGAAATATAACAGCTTTAATTTTAGCAACACTTTTATTTGCTAATTCATCCACAGTGGTTTTTGCCATGAA TAATGCTGAAAATAATTCCCGGGAAATAGAAAATAAAGAAGAAATTAAGGTTATAACTATACTGGGAAAAGATAATGAAG AAGAATTAAATCTAAATATGAAAGAAGTTATGGAAAAATTAGAAAAGGATAATTCAGAATTAAAGCTTATGGAGGGGAAA ATAAATCTTTTAAATAGGCTTTATGATAGAGATTTAACTTTATCTCAAAGTATAGATAATGATAGGGATATTTCAATAAA TTATAACAATGTATCCTTCAGAAGGCAACAAATGCTAAACTTTAGGCAATCAGCTTTAAATGTAAAATCTGCAAGAAAAG ATAAAGAAGATAAAGTAAAAGAAATAAAAAGAGAACTAGAAAGAAACTATTTAAATGTTTTAAATTGTAGAAGAGATATA AAAAATACAGAAGAAACTTTAAATAATTTAGATATGCAAATAGAGAAATTACAAAGATATATAGATGAAGGTAAGGCAAG CTCTACTTCTATAGAGCCTTTAAAAGTGCAGAAAACTCAACTTAGCTCATCTCTTAATCTGCCAAAACTTCAAGAGCAAG AATCACTTTTAAAGATAAAACAGTATTTAGGGTTAGATCAAACTAAGAATATTAAACTTAATTTAGAATATGCTAATAAA GAATTTAAGCTATATAATCCAGAGAACATAGATAAAATCATAAATGATAGTATTGAGAAAAATTTTGGATTATATAAAAT GAATGAAGAACTAGAATTTCTAAAAGTGGAAAGGCATATTTATGAAAAATACGGAAGAAATACAGAGGTAGAGTCAACCA ATATAGATATTAGAATGAAAGATATGCAAAATTCTATAGAAGATTATAAATTAAATTTGAGAGTTAACTTCTGGTCAGCT TATTATAATTTAAAGGGAAAAGAAGAAGCGGTAGATGTGGCAAAAGCAAATTTAGCTCATTCAAAAATGAAATACGAAGA AACAAAATATAGATCTGATCAAGGATTAGAAGATAAAGTCCAATTAGAGTCAGCTAAATTAGACTTCGAGAAAAAGAAAA TAGAAGAAGAAAAAGCAATAAATGAATATATGATTACTGTACAGAGCTTTAAAGATACTTTAGGTATAGAAGAATAA
Upstream 100 bases:
>100_bases GGCGGAAAGAGAAGCATATATTGCAAAACTTAAACTAGAATTTGCAGCTTCTGTAGGAACGGATTCAAAGAAAGTATTCT ATCAATAAAGGGGGATAAGA
Downstream 100 bases:
>100_bases TTATATAAGTTTTGAAGTAAAGAGGTTATGTATAGCCTCTTTATTATTTTTATGGGAAATGATATACTTATTAGCATAAT TTACTTATACATTGGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE
Sequences:
>Translated_398_residues MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE >Mature_398_residues MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46785; Mature: 46785
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNM CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH KEVMEKLEKDNSELKLMEGKINLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLN HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCHHHHHHHHHH FRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDIKNTEETLNNLDMQIEKLQRY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK HHCCCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMK EEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEH DMQNSIEDYKLNLRVNFWSAYYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKV HHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNM CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH KEVMEKLEKDNSELKLMEGKINLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLN HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCHHHHHHHHHH FRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDIKNTEETLNNLDMQIEKLQRY HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK HHCCCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMK EEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEH DMQNSIEDYKLNLRVNFWSAYYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKV HHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA