Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210236

Identifier: 28210236

GI number: 28210236

Start: 493995

End: 495191

Strand: Direct

Name: 28210236

Synonym: CTC00488

Alternate gene names: NA

Gene position: 493995-495191 (Clockwise)

Preceding gene: 28210235

Following gene: 28210237

Centisome position: 17.65

GC content: 26.32

Gene sequence:

>1197_bases
ATGAAGAAAGGAAATATAACAGCTTTAATTTTAGCAACACTTTTATTTGCTAATTCATCCACAGTGGTTTTTGCCATGAA
TAATGCTGAAAATAATTCCCGGGAAATAGAAAATAAAGAAGAAATTAAGGTTATAACTATACTGGGAAAAGATAATGAAG
AAGAATTAAATCTAAATATGAAAGAAGTTATGGAAAAATTAGAAAAGGATAATTCAGAATTAAAGCTTATGGAGGGGAAA
ATAAATCTTTTAAATAGGCTTTATGATAGAGATTTAACTTTATCTCAAAGTATAGATAATGATAGGGATATTTCAATAAA
TTATAACAATGTATCCTTCAGAAGGCAACAAATGCTAAACTTTAGGCAATCAGCTTTAAATGTAAAATCTGCAAGAAAAG
ATAAAGAAGATAAAGTAAAAGAAATAAAAAGAGAACTAGAAAGAAACTATTTAAATGTTTTAAATTGTAGAAGAGATATA
AAAAATACAGAAGAAACTTTAAATAATTTAGATATGCAAATAGAGAAATTACAAAGATATATAGATGAAGGTAAGGCAAG
CTCTACTTCTATAGAGCCTTTAAAAGTGCAGAAAACTCAACTTAGCTCATCTCTTAATCTGCCAAAACTTCAAGAGCAAG
AATCACTTTTAAAGATAAAACAGTATTTAGGGTTAGATCAAACTAAGAATATTAAACTTAATTTAGAATATGCTAATAAA
GAATTTAAGCTATATAATCCAGAGAACATAGATAAAATCATAAATGATAGTATTGAGAAAAATTTTGGATTATATAAAAT
GAATGAAGAACTAGAATTTCTAAAAGTGGAAAGGCATATTTATGAAAAATACGGAAGAAATACAGAGGTAGAGTCAACCA
ATATAGATATTAGAATGAAAGATATGCAAAATTCTATAGAAGATTATAAATTAAATTTGAGAGTTAACTTCTGGTCAGCT
TATTATAATTTAAAGGGAAAAGAAGAAGCGGTAGATGTGGCAAAAGCAAATTTAGCTCATTCAAAAATGAAATACGAAGA
AACAAAATATAGATCTGATCAAGGATTAGAAGATAAAGTCCAATTAGAGTCAGCTAAATTAGACTTCGAGAAAAAGAAAA
TAGAAGAAGAAAAAGCAATAAATGAATATATGATTACTGTACAGAGCTTTAAAGATACTTTAGGTATAGAAGAATAA

Upstream 100 bases:

>100_bases
GGCGGAAAGAGAAGCATATATTGCAAAACTTAAACTAGAATTTGCAGCTTCTGTAGGAACGGATTCAAAGAAAGTATTCT
ATCAATAAAGGGGGATAAGA

Downstream 100 bases:

>100_bases
TTATATAAGTTTTGAAGTAAAGAGGTTATGTATAGCCTCTTTATTATTTTTATGGGAAATGATATACTTATTAGCATAAT
TTACTTATACATTGGGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK
INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI
KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK
EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA
YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE

Sequences:

>Translated_398_residues
MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK
INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI
KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK
EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA
YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE
>Mature_398_residues
MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNMKEVMEKLEKDNSELKLMEGK
INLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLNFRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDI
KNTEETLNNLDMQIEKLQRYIDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK
EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMKDMQNSIEDYKLNLRVNFWSA
YYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKVQLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46785; Mature: 46785

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNM
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH
KEVMEKLEKDNSELKLMEGKINLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLN
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCHHHHHHHHHH
FRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDIKNTEETLNNLDMQIEKLQRY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK
HHCCCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMK
EEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEH
DMQNSIEDYKLNLRVNFWSAYYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKV
HHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
QLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKGNITALILATLLFANSSTVVFAMNNAENNSREIENKEEIKVITILGKDNEEELNLNM
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCH
KEVMEKLEKDNSELKLMEGKINLLNRLYDRDLTLSQSIDNDRDISINYNNVSFRRQQMLN
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCHHHHHHHHHH
FRQSALNVKSARKDKEDKVKEIKRELERNYLNVLNCRRDIKNTEETLNNLDMQIEKLQRY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDEGKASSTSIEPLKVQKTQLSSSLNLPKLQEQESLLKIKQYLGLDQTKNIKLNLEYANK
HHCCCCCCCCCCCEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
EFKLYNPENIDKIINDSIEKNFGLYKMNEELEFLKVERHIYEKYGRNTEVESTNIDIRMK
EEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEH
DMQNSIEDYKLNLRVNFWSAYYNLKGKEEAVDVAKANLAHSKMKYEETKYRSDQGLEDKV
HHHCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
QLESAKLDFEKKKIEEEKAINEYMITVQSFKDTLGIEE
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA