Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210235

Identifier: 28210235

GI number: 28210235

Start: 492846

End: 493982

Strand: Direct

Name: 28210235

Synonym: CTC00487

Alternate gene names: NA

Gene position: 492846-493982 (Clockwise)

Preceding gene: 28210234

Following gene: 28210236

Centisome position: 17.61

GC content: 27.0

Gene sequence:

>1137_bases
TTGGATAATTTAATGGAAAAGGCCGTAGAAAACTCCATAGAAGTTAAGAATAGAAAGAGTACTATAGAAAGTTTAGAAAA
TGGATTTCAGGATAATATAAATGGAACAGATTCAGTATATGAAAGAATAGAAAAAAATGAACGATTTAAAAAACTTCAAA
ATAAAAGTGAAAGAACAGAAGATGAACAAAGAGAATATGAATACTATCAAAGAAATTTTGGAATCCCAATAACAGGAGAA
TATGAACTTTTTCAAATGCTTCAATCAGCTAATAATCTTCCTGTATTAGGCGAATTTGAGATGTTTCAAAATAAAAATGC
CCTAGAAGTGGATAAAAATTCTGTAAGACAAAGGGTTTATGAAGGATATGGAAAATTTTTAATGGAAATGGATAAATTAA
AACTTGCAAAGGATAAATACAAAAATGTAGAAGATGAATACAAAAAATCGGAAGTATCCTACAAAACTGGAGTTCTTTCT
AAAACAGATTATTTAGCTAAAAAAGCTGAGTATTTAAAGGAAAAAGGAGAATTTTCAAATATAGATAGGGAATTTCAAAA
ATATAATATGGAATTTAACAAATTAGTAGGAGAACCATTAGATAAGAAATACTCAAGTTATAAAAAGGATTTTAATTTAG
ATAAATCCACATTAAAATCTCAAGATGAGTATATAAAGGAAGCTTTAGAAAATAGAATGGAAATAAAAAATGGGGAAGAA
AATATTTTAGTAAGAAGATTTGAAAGTGGGTCAGCAAAGGCAGTATTTTCTAGTGAACATAATAGAGAAAGAAAACTTGC
AGAACAAAAGATACAAAATGCAGAAGATGAATTAGAGCTTAAAAAGCTAGACATAAAAATGGAGATAAATTTACTATATA
ATGATTTTGAAATAAAGCTTGTAAGGTTAAAAAATTTAGAAGAGGGTTATAAACAAGCTAAAAAAGAATATGATGAATCC
TATAAAAAATATAGCTTAGGAATGTTAAGTAGGCTAGATTTTAATAGAAAAAATGCAGAATTTATAGAAAGCAGTATGGA
TTATAAAGAGGCGGAAAGAGAAGCATATATTGCAAAACTTAAACTAGAATTTGCAGCTTCTGTAGGAACGGATTCAAAGA
AAGTATTCTATCAATAA

Upstream 100 bases:

>100_bases
TATGCCTCTTAGTTATTAATACAATATGTATTTTCCCTAAATCACAGGGAACTATAGTAAAAGCTAAAGAAAATAAAGGT
GACGTTGGACAATTCTTGAT

Downstream 100 bases:

>100_bases
AGGGGGATAAGAATGAAGAAAGGAAATATAACAGCTTTAATTTTAGCAACACTTTTATTTGCTAATTCATCCACAGTGGT
TTTTGCCATGAATAATGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MDNLMEKAVENSIEVKNRKSTIESLENGFQDNINGTDSVYERIEKNERFKKLQNKSERTEDEQREYEYYQRNFGIPITGE
YELFQMLQSANNLPVLGEFEMFQNKNALEVDKNSVRQRVYEGYGKFLMEMDKLKLAKDKYKNVEDEYKKSEVSYKTGVLS
KTDYLAKKAEYLKEKGEFSNIDREFQKYNMEFNKLVGEPLDKKYSSYKKDFNLDKSTLKSQDEYIKEALENRMEIKNGEE
NILVRRFESGSAKAVFSSEHNRERKLAEQKIQNAEDELELKKLDIKMEINLLYNDFEIKLVRLKNLEEGYKQAKKEYDES
YKKYSLGMLSRLDFNRKNAEFIESSMDYKEAEREAYIAKLKLEFAASVGTDSKKVFYQ

Sequences:

>Translated_378_residues
MDNLMEKAVENSIEVKNRKSTIESLENGFQDNINGTDSVYERIEKNERFKKLQNKSERTEDEQREYEYYQRNFGIPITGE
YELFQMLQSANNLPVLGEFEMFQNKNALEVDKNSVRQRVYEGYGKFLMEMDKLKLAKDKYKNVEDEYKKSEVSYKTGVLS
KTDYLAKKAEYLKEKGEFSNIDREFQKYNMEFNKLVGEPLDKKYSSYKKDFNLDKSTLKSQDEYIKEALENRMEIKNGEE
NILVRRFESGSAKAVFSSEHNRERKLAEQKIQNAEDELELKKLDIKMEINLLYNDFEIKLVRLKNLEEGYKQAKKEYDES
YKKYSLGMLSRLDFNRKNAEFIESSMDYKEAEREAYIAKLKLEFAASVGTDSKKVFYQ
>Mature_378_residues
MDNLMEKAVENSIEVKNRKSTIESLENGFQDNINGTDSVYERIEKNERFKKLQNKSERTEDEQREYEYYQRNFGIPITGE
YELFQMLQSANNLPVLGEFEMFQNKNALEVDKNSVRQRVYEGYGKFLMEMDKLKLAKDKYKNVEDEYKKSEVSYKTGVLS
KTDYLAKKAEYLKEKGEFSNIDREFQKYNMEFNKLVGEPLDKKYSSYKKDFNLDKSTLKSQDEYIKEALENRMEIKNGEE
NILVRRFESGSAKAVFSSEHNRERKLAEQKIQNAEDELELKKLDIKMEINLLYNDFEIKLVRLKNLEEGYKQAKKEYDES
YKKYSLGMLSRLDFNRKNAEFIESSMDYKEAEREAYIAKLKLEFAASVGTDSKKVFYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44876; Mature: 44876

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLMEKAVENSIEVKNRKSTIESLENGFQDNINGTDSVYERIEKNERFKKLQNKSERTE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
DEQREYEYYQRNFGIPITGEYELFQMLQSANNLPVLGEFEMFQNKNALEVDKNSVRQRVY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCHHHHHHHHH
EGYGKFLMEMDKLKLAKDKYKNVEDEYKKSEVSYKTGVLSKTDYLAKKAEYLKEKGEFSN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
IDREFQKYNMEFNKLVGEPLDKKYSSYKKDFNLDKSTLKSQDEYIKEALENRMEIKNGEE
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NILVRRFESGSAKAVFSSEHNRERKLAEQKIQNAEDELELKKLDIKMEINLLYNDFEIKL
CEEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCEEEEEEEEEECCEEEE
VRLKNLEEGYKQAKKEYDESYKKYSLGMLSRLDFNRKNAEFIESSMDYKEAEREAYIAKL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH
KLEFAASVGTDSKKVFYQ
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDNLMEKAVENSIEVKNRKSTIESLENGFQDNINGTDSVYERIEKNERFKKLQNKSERTE
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
DEQREYEYYQRNFGIPITGEYELFQMLQSANNLPVLGEFEMFQNKNALEVDKNSVRQRVY
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCHHHHHHHHH
EGYGKFLMEMDKLKLAKDKYKNVEDEYKKSEVSYKTGVLSKTDYLAKKAEYLKEKGEFSN
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCH
IDREFQKYNMEFNKLVGEPLDKKYSSYKKDFNLDKSTLKSQDEYIKEALENRMEIKNGEE
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
NILVRRFESGSAKAVFSSEHNRERKLAEQKIQNAEDELELKKLDIKMEINLLYNDFEIKL
CEEEEEECCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCEEEEEEEEEECCEEEE
VRLKNLEEGYKQAKKEYDESYKKYSLGMLSRLDFNRKNAEFIESSMDYKEAEREAYIAKL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHH
KLEFAASVGTDSKKVFYQ
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA