| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210219
Identifier: 28210219
GI number: 28210219
Start: 474135
End: 474449
Strand: Direct
Name: 28210219
Synonym: CTC00470
Alternate gene names: NA
Gene position: 474135-474449 (Clockwise)
Preceding gene: 28210218
Following gene: 28210220
Centisome position: 16.94
GC content: 31.43
Gene sequence:
>315_bases GTGGACCAAACGAAATCCTATGTATTTAGGATAGTGAGGGATAGCAGTGAATCAGCAGACAGTGGTGAGCATAAAATAGA ATCCGCAAAAATAGGAATATTAGAAGGAACAACACTTAAAGATATTCCAACGGGTACAACTATAGAACAATTAAAAAAAG CATTAACAGTATCAAAAGGAGCTAATATTCATTTTGTAAAAAAGAATGAACAAGATACTCCAGAAATAAAAGACCTAACA GAATTAGTAACTGATGAAATGGAAATAGTAGTGGAATCAGGAACACAAACAGTATATACAATAGAAATAATTTAA
Upstream 100 bases:
>100_bases ATATATAGTAATTTATATTAAAAATACTTATAAAATAAAATCTTATATTAGTATCTATTGTCGATGGAACGCCCTATGCG GTGAAAGTCGCACGTAGGGT
Downstream 100 bases:
>100_bases TAGAATGATCGGAAACATTTCAAACTTAATTCACATCAAAACAATTTAAATTCATAAAATATCCAGGACACATCACTGGC TAAAAAATTAAATACATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDQTKSYVFRIVRDSSESADSGEHKIESAKIGILEGTTLKDIPTGTTIEQLKKALTVSKGANIHFVKKNEQDTPEIKDLT ELVTDEMEIVVESGTQTVYTIEII
Sequences:
>Translated_104_residues MDQTKSYVFRIVRDSSESADSGEHKIESAKIGILEGTTLKDIPTGTTIEQLKKALTVSKGANIHFVKKNEQDTPEIKDLT ELVTDEMEIVVESGTQTVYTIEII >Mature_104_residues MDQTKSYVFRIVRDSSESADSGEHKIESAKIGILEGTTLKDIPTGTTIEQLKKALTVSKGANIHFVKKNEQDTPEIKDLT ELVTDEMEIVVESGTQTVYTIEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11527; Mature: 11527
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQTKSYVFRIVRDSSESADSGEHKIESAKIGILEGTTLKDIPTGTTIEQLKKALTVSKG CCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC ANIHFVKKNEQDTPEIKDLTELVTDEMEIVVESGTQTVYTIEII CCEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEEC >Mature Secondary Structure MDQTKSYVFRIVRDSSESADSGEHKIESAKIGILEGTTLKDIPTGTTIEQLKKALTVSKG CCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC ANIHFVKKNEQDTPEIKDLTELVTDEMEIVVESGTQTVYTIEII CCEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA