Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210218

Identifier: 28210218

GI number: 28210218

Start: 471902

End: 473884

Strand: Direct

Name: 28210218

Synonym: CTC00469

Alternate gene names: NA

Gene position: 471902-473884 (Clockwise)

Preceding gene: 28210217

Following gene: 28210219

Centisome position: 16.86

GC content: 29.75

Gene sequence:

>1983_bases
GTGGACCAAGCGAAATCCTATGTATTTAGGATAGTAAGGGATAGCAAAGAAACAGAAGAGAAAGAAAAACAAGAACAAGC
TGAAAAGGAAAGACAAAAGAAATTAGCTGATAATCAGTCAGTGCAAAAAGCAAAGGATAATTTAAATTTAACTAATTTAA
ATTATGTAAGTTCTAACATTAATTTACCAAAGGATATTGACGGAGTTTCAATTACTTGGAAATCTAATAACACTAGTGTA
CTTGATGAAAAAGGAAATGTTACAAGACCATCAGCAACAAAGGGAGATACTTTAGTAACTCTAACAGCTACATTAACAAA
AGATGAAGCTAAAGATACAAAAGATTTTATAGTAACTGTTAAAGCTAAAGATTTTACAGATGAAGAACTTGTAGATACGG
CTCTTGGTAATTTACAAATAGAAGGAAGACTTGATTCTGTAGTAGATAATTTAAAGTTACCAACTAAAGATGGTAAAAAT
GCTGTAGATATAACTTGGAATTCAAGTAATGAATCAGTAGTTTCAAGTGCTGGTGTAGTTACAAGAACGGATAAAGACGA
GAATATTACATTAACAGCTACATTAAAAAAAGGCTCTATTACAAAAACTAAAGAATTTAATATAGTAGTTAAAGCAAAAG
AAAAAGATACACAAGAAGATTTAAAACTAATTGCAAATTCCTTAGAAATAACTAATAAAGATAATATAGAAAAAGACATT
AATCTACAAACTTCTTTAGATGGAGCAACTATAACATGGAAATCAAATAACGAAACTGTAATAACTAATACAGGAAAAGT
TTCAAGACCACAAATAGGAAAATCAGATGAAAAAGTAACATTAACTTCTACTATAACTAAAGATGGTAAAAGTGAAACTA
AAGATTTTACCCTAACTGTTAAAGCTGAAAAACAATTAGTAGCTAATAATAAACAAGAGTTTAACCAAATTTTAAAACAA
GCAATAATAGACTGTAAGCCTACAGTTGATATTAGCTTACCAAACTATGATTCTAATAGTAGTGAATATAATTTTGATGA
TTATCAAAAATTACTTGTTGAAATTGGTGAAATGGATTTTGGAAAGCCAGGGGTATCAGGTAGATCTAAAAATGACGGAA
AAGGTTGGATAATGACAGTAGAATTTGAATATAAAAAAGATGCAGCTGAAGTTAAAAGACAAAAAGAAGCTACAATAAAG
AAAGCTAAAGAAGTTGTAAAAGATGTTATAAAGCCAGGAATGACTGATTTTGAAAAAGAGTTAGCATTACATGATTATAT
AGTAAGAACTGCTGATTACAATGTAGAAAACTATAACAAAGGCAAAACTACTTTAGAAGATCATACAGCTTACGGAGTAT
TGGTGGATAAAATTGGTGTTTGCGAAAGTTATGCTAAAGCTATGAATTTACTTTTAAAAGAAGTTGGAATTGATTGTAAA
TACGTTACAGGGTTTTCTAAGCATGACGGAAAGAAAGGCGGCGGACATGCTTGGAACATGGTTAAGTTAGATGGAGAATG
GTACAATCTAGATGCTACATGGAATGATCCAGTTTCTGATAGAAATGGTGCTGAAAGTGTAAACAAAGACAATACTTCAC
CAGCAACAGTTAATCATACTTATTTTAATCTTCCAGATGATATTTTTAACAATGATCACATAAGAGGAGATTTTGAAGAA
AAGAATTATCCAAAATGTACAGCTACAAAATACTCATACCACAATATGGATGTAGATGAATACACAGCTGACGGAAAATT
AATTGAAAAAGTTACAACTAAAGATGAATTAGATGCAAAAATATTAGAAGCTTTAAAAAATAAAGAAACAACTTTAAGTT
TAAGAATTAAAGGCTTTAAAATGACCCAAAAGGAATTAAGTGAAGAATTTAAAGCAGTTGCAGAAAAAAATAGAGTGGGT
AGATTTAGTTGGACTACAAGTGCACCAGATGATTACCATGTTAACTATACTATAGAGTGGTAA

Upstream 100 bases:

>100_bases
TTTTAATAATATTGTACGTTCATTAAAATCCTTATAAAATCATATATTTAGTTTATATTATCGATAGAACGCCTTATGCG
GTGAAAGTCGCACGTAGGGT

Downstream 100 bases:

>100_bases
TTTACACTTAACAGCCCCGGGGTCATGAACAAGTTGTGAACAATACTAATCTAATTAAATAATCAATGTAGAATTGCTAT
ATCAAAATTTTATTTTGATA

Product: transglutaminase/protease

Products: NA

Alternate protein names: Lipoprotein; Transglutaminase/Protease; S-Layer Domain Protein; S-Layer Protein; Transglutaminase Domain Protein; Protease; Endo-1 4-Beta-Xylanase; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Transglutaminase-Like Superfamily Protein; Peptidoglycan Endo-Beta-N-Acetylglucosaminidase; Murein Endopeptidase; S-Layer-Like Domain-Containing Protein; S-Layer Homology Domain / Murein Endopeptidase; Transglutaminase Family Protein; Transglutaminase-Like Protease; Peptidase M; Protein Involved In Cytokinesis Contains TGc Domain; Hydrolase; Bacterial Ig-Like Domain; Ig Domain-Containing Protein; Exported Protein; Copper Amine Oxidase Domain Protein

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV
LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN
AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI
NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ
AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK
KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK
YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE
KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG
RFSWTTSAPDDYHVNYTIEW

Sequences:

>Translated_660_residues
MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV
LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN
AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI
NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ
AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK
KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK
YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE
KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG
RFSWTTSAPDDYHVNYTIEW
>Mature_660_residues
MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV
LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN
AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI
NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ
AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK
KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK
YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE
KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG
RFSWTTSAPDDYHVNYTIEW

Specific function: Unknown

COG id: COG5279

COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74195; Mature: 74195

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNI
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCC
NLPKDIDGVSITWKSNNTSVLDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTV
CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEE
KAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKNAVDITWNSSNESVVSSAGVV
EECCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCEE
TRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI
EECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTV
CEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE
KAEKQLVANNKQEFNQILKQAIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDF
EECHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
GKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIKKAKEVVKDVIKPGMTDFEKE
CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEE
YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHT
EEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YFNLPDDIFNNDHIRGDFEEKNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAK
EECCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHCCHHHHHHH
ILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVGRFSWTTSAPDDYHVNYTIEW
HHHHHCCCCEEEEEEEECEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNI
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCC
NLPKDIDGVSITWKSNNTSVLDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTV
CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEE
KAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKNAVDITWNSSNESVVSSAGVV
EECCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCEE
TRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI
EECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTV
CEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE
KAEKQLVANNKQEFNQILKQAIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDF
EECHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC
GKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIKKAKEVVKDVIKPGMTDFEKE
CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEE
YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHT
EEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YFNLPDDIFNNDHIRGDFEEKNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAK
EECCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHCCHHHHHHH
ILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVGRFSWTTSAPDDYHVNYTIEW
HHHHHCCCCEEEEEEEECEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA