| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210218
Identifier: 28210218
GI number: 28210218
Start: 471902
End: 473884
Strand: Direct
Name: 28210218
Synonym: CTC00469
Alternate gene names: NA
Gene position: 471902-473884 (Clockwise)
Preceding gene: 28210217
Following gene: 28210219
Centisome position: 16.86
GC content: 29.75
Gene sequence:
>1983_bases GTGGACCAAGCGAAATCCTATGTATTTAGGATAGTAAGGGATAGCAAAGAAACAGAAGAGAAAGAAAAACAAGAACAAGC TGAAAAGGAAAGACAAAAGAAATTAGCTGATAATCAGTCAGTGCAAAAAGCAAAGGATAATTTAAATTTAACTAATTTAA ATTATGTAAGTTCTAACATTAATTTACCAAAGGATATTGACGGAGTTTCAATTACTTGGAAATCTAATAACACTAGTGTA CTTGATGAAAAAGGAAATGTTACAAGACCATCAGCAACAAAGGGAGATACTTTAGTAACTCTAACAGCTACATTAACAAA AGATGAAGCTAAAGATACAAAAGATTTTATAGTAACTGTTAAAGCTAAAGATTTTACAGATGAAGAACTTGTAGATACGG CTCTTGGTAATTTACAAATAGAAGGAAGACTTGATTCTGTAGTAGATAATTTAAAGTTACCAACTAAAGATGGTAAAAAT GCTGTAGATATAACTTGGAATTCAAGTAATGAATCAGTAGTTTCAAGTGCTGGTGTAGTTACAAGAACGGATAAAGACGA GAATATTACATTAACAGCTACATTAAAAAAAGGCTCTATTACAAAAACTAAAGAATTTAATATAGTAGTTAAAGCAAAAG AAAAAGATACACAAGAAGATTTAAAACTAATTGCAAATTCCTTAGAAATAACTAATAAAGATAATATAGAAAAAGACATT AATCTACAAACTTCTTTAGATGGAGCAACTATAACATGGAAATCAAATAACGAAACTGTAATAACTAATACAGGAAAAGT TTCAAGACCACAAATAGGAAAATCAGATGAAAAAGTAACATTAACTTCTACTATAACTAAAGATGGTAAAAGTGAAACTA AAGATTTTACCCTAACTGTTAAAGCTGAAAAACAATTAGTAGCTAATAATAAACAAGAGTTTAACCAAATTTTAAAACAA GCAATAATAGACTGTAAGCCTACAGTTGATATTAGCTTACCAAACTATGATTCTAATAGTAGTGAATATAATTTTGATGA TTATCAAAAATTACTTGTTGAAATTGGTGAAATGGATTTTGGAAAGCCAGGGGTATCAGGTAGATCTAAAAATGACGGAA AAGGTTGGATAATGACAGTAGAATTTGAATATAAAAAAGATGCAGCTGAAGTTAAAAGACAAAAAGAAGCTACAATAAAG AAAGCTAAAGAAGTTGTAAAAGATGTTATAAAGCCAGGAATGACTGATTTTGAAAAAGAGTTAGCATTACATGATTATAT AGTAAGAACTGCTGATTACAATGTAGAAAACTATAACAAAGGCAAAACTACTTTAGAAGATCATACAGCTTACGGAGTAT TGGTGGATAAAATTGGTGTTTGCGAAAGTTATGCTAAAGCTATGAATTTACTTTTAAAAGAAGTTGGAATTGATTGTAAA TACGTTACAGGGTTTTCTAAGCATGACGGAAAGAAAGGCGGCGGACATGCTTGGAACATGGTTAAGTTAGATGGAGAATG GTACAATCTAGATGCTACATGGAATGATCCAGTTTCTGATAGAAATGGTGCTGAAAGTGTAAACAAAGACAATACTTCAC CAGCAACAGTTAATCATACTTATTTTAATCTTCCAGATGATATTTTTAACAATGATCACATAAGAGGAGATTTTGAAGAA AAGAATTATCCAAAATGTACAGCTACAAAATACTCATACCACAATATGGATGTAGATGAATACACAGCTGACGGAAAATT AATTGAAAAAGTTACAACTAAAGATGAATTAGATGCAAAAATATTAGAAGCTTTAAAAAATAAAGAAACAACTTTAAGTT TAAGAATTAAAGGCTTTAAAATGACCCAAAAGGAATTAAGTGAAGAATTTAAAGCAGTTGCAGAAAAAAATAGAGTGGGT AGATTTAGTTGGACTACAAGTGCACCAGATGATTACCATGTTAACTATACTATAGAGTGGTAA
Upstream 100 bases:
>100_bases TTTTAATAATATTGTACGTTCATTAAAATCCTTATAAAATCATATATTTAGTTTATATTATCGATAGAACGCCTTATGCG GTGAAAGTCGCACGTAGGGT
Downstream 100 bases:
>100_bases TTTACACTTAACAGCCCCGGGGTCATGAACAAGTTGTGAACAATACTAATCTAATTAAATAATCAATGTAGAATTGCTAT ATCAAAATTTTATTTTGATA
Product: transglutaminase/protease
Products: NA
Alternate protein names: Lipoprotein; Transglutaminase/Protease; S-Layer Domain Protein; S-Layer Protein; Transglutaminase Domain Protein; Protease; Endo-1 4-Beta-Xylanase; S-Layer Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Transglutaminase-Like Superfamily Protein; Peptidoglycan Endo-Beta-N-Acetylglucosaminidase; Murein Endopeptidase; S-Layer-Like Domain-Containing Protein; S-Layer Homology Domain / Murein Endopeptidase; Transglutaminase Family Protein; Transglutaminase-Like Protease; Peptidase M; Protein Involved In Cytokinesis Contains TGc Domain; Hydrolase; Bacterial Ig-Like Domain; Ig Domain-Containing Protein; Exported Protein; Copper Amine Oxidase Domain Protein
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG RFSWTTSAPDDYHVNYTIEW
Sequences:
>Translated_660_residues MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG RFSWTTSAPDDYHVNYTIEW >Mature_660_residues MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNINLPKDIDGVSITWKSNNTSV LDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTVKAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKN AVDITWNSSNESVVSSAGVVTRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTVKAEKQLVANNKQEFNQILKQ AIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDFGKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIK KAKEVVKDVIKPGMTDFEKELALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHTYFNLPDDIFNNDHIRGDFEE KNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAKILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVG RFSWTTSAPDDYHVNYTIEW
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74195; Mature: 74195
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNI CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCC NLPKDIDGVSITWKSNNTSVLDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTV CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEE KAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKNAVDITWNSSNESVVSSAGVV EECCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCEE TRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI EECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTV CEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE KAEKQLVANNKQEFNQILKQAIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDF EECHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC GKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIKKAKEVVKDVIKPGMTDFEKE CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEE YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHT EEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE YFNLPDDIFNNDHIRGDFEEKNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAK EECCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHCCHHHHHHH ILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVGRFSWTTSAPDDYHVNYTIEW HHHHHCCCCEEEEEEEECEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MDQAKSYVFRIVRDSKETEEKEKQEQAEKERQKKLADNQSVQKAKDNLNLTNLNYVSSNI CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCC NLPKDIDGVSITWKSNNTSVLDEKGNVTRPSATKGDTLVTLTATLTKDEAKDTKDFIVTV CCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEE KAKDFTDEELVDTALGNLQIEGRLDSVVDNLKLPTKDGKNAVDITWNSSNESVVSSAGVV EECCCCHHHHHHHHHCCEEEECCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCEE TRTDKDENITLTATLKKGSITKTKEFNIVVKAKEKDTQEDLKLIANSLEITNKDNIEKDI EECCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC NLQTSLDGATITWKSNNETVITNTGKVSRPQIGKSDEKVTLTSTITKDGKSETKDFTLTV CEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEE KAEKQLVANNKQEFNQILKQAIIDCKPTVDISLPNYDSNSSEYNFDDYQKLLVEIGEMDF EECHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC GKPGVSGRSKNDGKGWIMTVEFEYKKDAAEVKRQKEATIKKAKEVVKDVIKPGMTDFEKE CCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LALHDYIVRTADYNVENYNKGKTTLEDHTAYGVLVDKIGVCESYAKAMNLLLKEVGIDCK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEE YVTGFSKHDGKKGGGHAWNMVKLDGEWYNLDATWNDPVSDRNGAESVNKDNTSPATVNHT EEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE YFNLPDDIFNNDHIRGDFEEKNYPKCTATKYSYHNMDVDEYTADGKLIEKVTTKDELDAK EECCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHCCHHHHHHH ILEALKNKETTLSLRIKGFKMTQKELSEEFKAVAEKNRVGRFSWTTSAPDDYHVNYTIEW HHHHHCCCCEEEEEEEECEECHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA