| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is 28210217
Identifier: 28210217
GI number: 28210217
Start: 470077
End: 470967
Strand: Direct
Name: 28210217
Synonym: CTC00468
Alternate gene names: NA
Gene position: 470077-470967 (Clockwise)
Preceding gene: 28210216
Following gene: 28210218
Centisome position: 16.79
GC content: 29.63
Gene sequence:
>891_bases GTGGTCCAAGCGAAATCCTATGCATTTAGGATAGTGAGGGATAGCAAAAATGATAAAAATTATGTTGTAAGTAATATAAA AGCTGATAATCCAGAAGATTTAAATAGAATTTTAAAAGCAGAAATGGAAAATTATCCAAATACTATAGAATTTAAAGTTA AAACTGAAAAGATACAAGAAACATTTAATAATTTAGAATCAGCATATGATGATTATTTTAAAGAAAATAGAACAAAATAT CCTAATATTAAGTATGGGATAAAATTAAAAAGTCCAGATGGTAAATATAATCCAGCAGATGAATATGTAGATGTAATATT TGAAGCTAAATATGTAGTTTATGGAACAGAAGAAGAAATTCCAGCAGAAAAACTTAGGAGCTACGAAGACGAAGCAGAAA AAATAGCGAAGGACTTTGTAAATAAAGAAATAGAAGGTAAAAATTTATCTGATGCAGAAAAGGCTTTAAAGATAAATGAT TATTTAGTAAAAAGAGCAGCATACCATCATGAAGGTGTAAATACATACTATGTAGAAGACCATATCGCATATGGAATTTT AAGTGATCGAAAAAAAGGTGTTTGTGAATCCTATGCAAAAGCATTCCAATTACTTGCAGAGAAATCAGGATTAACAAGCA TTTACGTTACAGGACAAGGAAAGAACCCTAATAAAGATAAAGGAGAAGCTCATGCATGGAATATGGTGAAAATAGATGGT CAGTGGTATAGTATAGATACTACCTGGAACGATATTGGGGAAGGAAGTAGATATGATTACTTCTTAAAGTCAGATGATGA TATGAAAGCTACTCACACAAGATCAACAGATTTTAATTATCCTACAGGAAATGGAACAAAAGATTTTGTTGCAGAATTAA AATTAAAATAA
Upstream 100 bases:
>100_bases TAATGTTGTAAGTACTTATTATGTAATGTATAATTTATGTTAACTTCCAAATTTCTATTGTCGATGGAACGCCTTATGCG ATGAAAGTCGCACGTAGGGT
Downstream 100 bases:
>100_bases AAGTAAGCAAGCTCAGTTTCTTTCGTAAGGATTCCAAGAATCATGAACAAATTATAAACAAAAATAAATAAAATATTAAT TAGTAAAGCTTAAAAGGATA
Product: transglutaminase/protease
Products: NA
Alternate protein names: Transglutaminase/Protease; Lipoprotein; Peptidoglycan Endo-Beta-N-Acetylglucosaminidase; S-Layer Domain-Containing Protein; S-Layer Protein; Transglutaminase Family Protein; Transglutaminase Domain Protein; S-Layer Domain Protein; Protease; Transglutaminase-Like Superfamily Protein; Murein Endopeptidase; S-Layer-Like Domain-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Ig Domain-Containing Protein; Exported Protein; Copper Amine Oxidase Domain Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MVQAKSYAFRIVRDSKNDKNYVVSNIKADNPEDLNRILKAEMENYPNTIEFKVKTEKIQETFNNLESAYDDYFKENRTKY PNIKYGIKLKSPDGKYNPADEYVDVIFEAKYVVYGTEEEIPAEKLRSYEDEAEKIAKDFVNKEIEGKNLSDAEKALKIND YLVKRAAYHHEGVNTYYVEDHIAYGILSDRKKGVCESYAKAFQLLAEKSGLTSIYVTGQGKNPNKDKGEAHAWNMVKIDG QWYSIDTTWNDIGEGSRYDYFLKSDDDMKATHTRSTDFNYPTGNGTKDFVAELKLK
Sequences:
>Translated_296_residues MVQAKSYAFRIVRDSKNDKNYVVSNIKADNPEDLNRILKAEMENYPNTIEFKVKTEKIQETFNNLESAYDDYFKENRTKY PNIKYGIKLKSPDGKYNPADEYVDVIFEAKYVVYGTEEEIPAEKLRSYEDEAEKIAKDFVNKEIEGKNLSDAEKALKIND YLVKRAAYHHEGVNTYYVEDHIAYGILSDRKKGVCESYAKAFQLLAEKSGLTSIYVTGQGKNPNKDKGEAHAWNMVKIDG QWYSIDTTWNDIGEGSRYDYFLKSDDDMKATHTRSTDFNYPTGNGTKDFVAELKLK >Mature_296_residues MVQAKSYAFRIVRDSKNDKNYVVSNIKADNPEDLNRILKAEMENYPNTIEFKVKTEKIQETFNNLESAYDDYFKENRTKY PNIKYGIKLKSPDGKYNPADEYVDVIFEAKYVVYGTEEEIPAEKLRSYEDEAEKIAKDFVNKEIEGKNLSDAEKALKIND YLVKRAAYHHEGVNTYYVEDHIAYGILSDRKKGVCESYAKAFQLLAEKSGLTSIYVTGQGKNPNKDKGEAHAWNMVKIDG QWYSIDTTWNDIGEGSRYDYFLKSDDDMKATHTRSTDFNYPTGNGTKDFVAELKLK
Specific function: Unknown
COG id: COG5279
COG function: function code D; Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34145; Mature: 34145
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQAKSYAFRIVRDSKNDKNYVVSNIKADNPEDLNRILKAEMENYPNTIEFKVKTEKIQE CCCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHH TFNNLESAYDDYFKENRTKYPNIKYGIKLKSPDGKYNPADEYVDVIFEAKYVVYGTEEEI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCC PAEKLRSYEDEAEKIAKDFVNKEIEGKNLSDAEKALKINDYLVKRAAYHHEGVNTYYVED CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC HIAYGILSDRKKGVCESYAKAFQLLAEKSGLTSIYVTGQGKNPNKDKGEAHAWNMVKIDG HHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECC QWYSIDTTWNDIGEGSRYDYFLKSDDDMKATHTRSTDFNYPTGNGTKDFVAELKLK EEEEEECCHHHCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MVQAKSYAFRIVRDSKNDKNYVVSNIKADNPEDLNRILKAEMENYPNTIEFKVKTEKIQE CCCCCCEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHH TFNNLESAYDDYFKENRTKYPNIKYGIKLKSPDGKYNPADEYVDVIFEAKYVVYGTEEEI HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCCCC PAEKLRSYEDEAEKIAKDFVNKEIEGKNLSDAEKALKINDYLVKRAAYHHEGVNTYYVED CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC HIAYGILSDRKKGVCESYAKAFQLLAEKSGLTSIYVTGQGKNPNKDKGEAHAWNMVKIDG HHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEEECC QWYSIDTTWNDIGEGSRYDYFLKSDDDMKATHTRSTDFNYPTGNGTKDFVAELKLK EEEEEECCHHHCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA