Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210216

Identifier: 28210216

GI number: 28210216

Start: 469186

End: 469884

Strand: Direct

Name: 28210216

Synonym: CTC00467

Alternate gene names: NA

Gene position: 469186-469884 (Clockwise)

Preceding gene: 28210215

Following gene: 28210217

Centisome position: 16.76

GC content: 29.9

Gene sequence:

>699_bases
GTGAGGTATAGCAAAGGAGAAAATACAGATAATTTAGGTGTGGAACTAATAAGTGAAATAACAAAACATGGTGTAAAAAG
AACTTTAGCTACTATGCAAAAAAGTCATCTTATAATTAAAGGTGATGTAACAGAAACAGCAGAACTTAAAGTAGCTGATA
AAATGGTATCTGTAGAAAAGGGTGATGATAACCTAAAAGTAGCAAATAAAATAGTTAAGGCTTTTGAGGATGATGAAGAT
TGGACTGCTGAGAAAATATATATAGTAAGAGCGGGAGAAAATCCATCATCAAATGTAACATTTACATCTAAAAAAGTTAG
AGAACATGTAGATAATTTAGGTGAAAGCGGACATGGTATAGTATTTTCACAAGCAAATGAAGAAACAGGAGATACTGGTA
TTTCAGAAGTTAAAGAAATATGTAATGTAACTGTAACAAAAGGTGCTACTAAAAATGGAGAGATAAAAGTTAGTATAAAG
GATACTAAAAACAATAGAACTTTATCAAGTGTTTCTATAAATGTAGCAAAAGGCGATGATACTAAAAAAGTTGCTGAAGC
TATATCAAATGCATTTAAAAATGATGCTCAAAGCAAAAGATTATATAAGATAGAATTACAAAAAGATAATTCTAGAATAG
TATTAACTCAATCGGTAGCAGACAACAATATTAATACGGCAGTGAGTATAGACAAATAG

Upstream 100 bases:

>100_bases
GAAAATATATTTATACACTTCCTATTATCGAGCGAACGCCTTATGCGATGAAAGTCGCACGTAGGGTGTAGACCAAGCGA
AATCCTATGCATTTAGGATA

Downstream 100 bases:

>100_bases
TTTACTATTTGGGCTAAAAATAAGAAAAAAGGTTGAATAGATTTAATTTATTCAACCTTTTTAATTAAATATTATTATAA
AATTTAATTAAATAATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED
WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK
DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK

Sequences:

>Translated_232_residues
MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED
WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK
DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK
>Mature_232_residues
MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED
WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK
DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25399; Mature: 25399

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEEEC
GDDNLKVANKIVKAFEDDEDWTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGI
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCEE
VFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIKDTKNNRTLSSVSINVAKGDD
EEECCCCCCCCCCHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC
TKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure
MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEEEC
GDDNLKVANKIVKAFEDDEDWTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGI
CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCEE
VFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIKDTKNNRTLSSVSINVAKGDD
EEECCCCCCCCCCHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC
TKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA