| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is yiaH [C]
Identifier: 28210212
GI number: 28210212
Start: 458458
End: 459504
Strand: Direct
Name: yiaH [C]
Synonym: CTC00459
Alternate gene names: 28210212
Gene position: 458458-459504 (Clockwise)
Preceding gene: 28210210
Following gene: 28210213
Centisome position: 16.38
GC content: 24.74
Gene sequence:
>1047_bases ATGGAAAAATATAAAAAAGTTAAAAGAGAAAAAATAATAGAAATGGATATGTTAAGGGCAATATGTGCTATAGCAGTAGT TATAATACATACCTCAGGGTACACTCTTATAAATAGTGTAAAAGGATCTGTATCTTATAATGTTTCCCTTTCACTAAACC AAATAACTAGATTTTCTGTTCCTCTTTTTTTATTTCTATCTGGACTTGGATTAGGTATTTCTTATAAAAGAGATGAAAGT TATTTTAAGTTTCTAAAAAAAAGAGTTTTTAAAATTATTCCTCCCTATATATTATGGGGAAGCTTATATTTAATTTTAAT ACAAAAAAATTATGATTATAGAAGTTGGGGAGAACTTTTTTTAAAAGGAGATAAAGTATTTTACCATTTATATTACATAC CACTAATAATGACTTTATACATAATATTTCCTATATTTTATCCTTTATTTAAAAGGATAGAAGGAGTTATTTTTTGTCTT TTAATAAGTCTTGGTGCTACCTATTTTGGACACTATTATAATATTCCAGATTTAACTTTAGACATTTTTTCTAAAAGAAA TGCGATTTTTTGGAACGTTTATTTTGTTAGCGGCGTCTATATTAGTAGAAAGGTAAATAATCTAATTAGAAGAACAAAAA CTCATAAAGTGAAAATAATGATAATATTAATAATATGTGTAATATGCCTAATAGGAGAAAGTTTTATAGGTTTAAAAAGT GGAAAATCCTTAGACTATTCTACGACCTTTATAAGACCTAGTGTAATGATATATTCCTATATTGTAATGCTTTATGTTTT TTCTAAAAGTTATAGGAAGTCTATAGGAGTAAAAATTTTAAGGGAAATATCTAAAAGTTCTTTTAGTATATATTTGATTC ATCCTATGGTTCTTTACTACTATATGAAAATTTTTTCAAAAAATAATTTAAATATGGGAACGCTTTGGTTTTTAGTTTCG TCTATATTAGTGAGTACAGGAATTCCATACCTATTGTGGAATATAAAAGACAAGTTTGATAAATTATCATATGTTAGTAA TGAATAA
Upstream 100 bases:
>100_bases TGAAAAAAAATCAATAAATAATGTAAAAAGGATTATGGTATAATAGCTAATAAATGGTAGGATATACAAAGCATTTGTTA TAAAAAGGAGAAATTACTAT
Downstream 100 bases:
>100_bases TGAATATGAAGTATATAAGTAATGGAGTTAAGAAAAATTTAATAATTAAAAGGTATTATAATTATTAAAGCCTTGTTCCA ATATATTACTATATATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: Acyltransferase Family Protein
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MEKYKKVKREKIIEMDMLRAICAIAVVIIHTSGYTLINSVKGSVSYNVSLSLNQITRFSVPLFLFLSGLGLGISYKRDES YFKFLKKRVFKIIPPYILWGSLYLILIQKNYDYRSWGELFLKGDKVFYHLYYIPLIMTLYIIFPIFYPLFKRIEGVIFCL LISLGATYFGHYYNIPDLTLDIFSKRNAIFWNVYFVSGVYISRKVNNLIRRTKTHKVKIMIILIICVICLIGESFIGLKS GKSLDYSTTFIRPSVMIYSYIVMLYVFSKSYRKSIGVKILREISKSSFSIYLIHPMVLYYYMKIFSKNNLNMGTLWFLVS SILVSTGIPYLLWNIKDKFDKLSYVSNE
Sequences:
>Translated_348_residues MEKYKKVKREKIIEMDMLRAICAIAVVIIHTSGYTLINSVKGSVSYNVSLSLNQITRFSVPLFLFLSGLGLGISYKRDES YFKFLKKRVFKIIPPYILWGSLYLILIQKNYDYRSWGELFLKGDKVFYHLYYIPLIMTLYIIFPIFYPLFKRIEGVIFCL LISLGATYFGHYYNIPDLTLDIFSKRNAIFWNVYFVSGVYISRKVNNLIRRTKTHKVKIMIILIICVICLIGESFIGLKS GKSLDYSTTFIRPSVMIYSYIVMLYVFSKSYRKSIGVKILREISKSSFSIYLIHPMVLYYYMKIFSKNNLNMGTLWFLVS SILVSTGIPYLLWNIKDKFDKLSYVSNE >Mature_348_residues MEKYKKVKREKIIEMDMLRAICAIAVVIIHTSGYTLINSVKGSVSYNVSLSLNQITRFSVPLFLFLSGLGLGISYKRDES YFKFLKKRVFKIIPPYILWGSLYLILIQKNYDYRSWGELFLKGDKVFYHLYYIPLIMTLYIIFPIFYPLFKRIEGVIFCL LISLGATYFGHYYNIPDLTLDIFSKRNAIFWNVYFVSGVYISRKVNNLIRRTKTHKVKIMIILIICVICLIGESFIGLKS GKSLDYSTTFIRPSVMIYSYIVMLYVFSKSYRKSIGVKILREISKSSFSIYLIHPMVLYYYMKIFSKNNLNMGTLWFLVS SILVSTGIPYLLWNIKDKFDKLSYVSNE
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40803; Mature: 40803
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKYKKVKREKIIEMDMLRAICAIAVVIIHTSGYTLINSVKGSVSYNVSLSLNQITRFSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEHHHHHHHHH PLFLFLSGLGLGISYKRDESYFKFLKKRVFKIIPPYILWGSLYLILIQKNYDYRSWGELF HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCHHHHE LKGDKVFYHLYYIPLIMTLYIIFPIFYPLFKRIEGVIFCLLISLGATYFGHYYNIPDLTL EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH DIFSKRNAIFWNVYFVSGVYISRKVNNLIRRTKTHKVKIMIILIICVICLIGESFIGLKS HHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC GKSLDYSTTFIRPSVMIYSYIVMLYVFSKSYRKSIGVKILREISKSSFSIYLIHPMVLYY CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH YMKIFSKNNLNMGTLWFLVSSILVSTGIPYLLWNIKDKFDKLSYVSNE HHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCC >Mature Secondary Structure MEKYKKVKREKIIEMDMLRAICAIAVVIIHTSGYTLINSVKGSVSYNVSLSLNQITRFSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEEEEHHHHHHHHH PLFLFLSGLGLGISYKRDESYFKFLKKRVFKIIPPYILWGSLYLILIQKNYDYRSWGELF HHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCCCHHHHE LKGDKVFYHLYYIPLIMTLYIIFPIFYPLFKRIEGVIFCLLISLGATYFGHYYNIPDLTL EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH DIFSKRNAIFWNVYFVSGVYISRKVNNLIRRTKTHKVKIMIILIICVICLIGESFIGLKS HHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC GKSLDYSTTFIRPSVMIYSYIVMLYVFSKSYRKSIGVKILREISKSSFSIYLIHPMVLYY CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH YMKIFSKNNLNMGTLWFLVSSILVSTGIPYLLWNIKDKFDKLSYVSNE HHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA