Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210197

Identifier: 28210197

GI number: 28210197

Start: 442029

End: 442382

Strand: Direct

Name: 28210197

Synonym: CTC00444

Alternate gene names: NA

Gene position: 442029-442382 (Clockwise)

Preceding gene: 28210196

Following gene: 28210199

Centisome position: 15.79

GC content: 26.27

Gene sequence:

>354_bases
TTGGAACATGATATTTTATCAATTAAAAGTAAAGAATTTGCACTAAAAATAATAAGACTATGTAAAATAGCCACAAAAGA
AAAGAAAGAATATATTATATCAAAACAACTTCTAAAAAGTGGCACTAGTATAGGTGCAAATATTAGGGAAGCAAAATTTG
CTGAAAGTAAAAAAGATTTCGCCTCTAAAATGAGCATCGCACTCAAAGAAACAAGTGAAACATTATACTGGATAGAATTA
TTAACTGAATCAGATTATATTACGCCATTTGAAAGTAAAGATATTAAACAAGATTGTTTAGAACTTCTAAAAATACTACA
ATCAACAGTTAAAACAAGCAAAAAAGCTAATTAA

Upstream 100 bases:

>100_bases
TTTATTAAAATAATAAATAATGAATAAAATAAAAGTGATAGGTAATAATTAGGATAAGTAATTATTGCCTATCACTTTTA
TTTAGAAAGGAGTCTTAAAT

Downstream 100 bases:

>100_bases
ATAGCTGTAATATTAAGTGGAATTTTCAGCCACTAAGCAAAGCATGCGATGTTAAGCAAAGTATGTGATGCTAAGCAAAG
TATGTGATGCTAAGCAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MEHDILSIKSKEFALKIIRLCKIATKEKKEYIISKQLLKSGTSIGANIREAKFAESKKDFASKMSIALKETSETLYWIEL
LTESDYITPFESKDIKQDCLELLKILQSTVKTSKKAN

Sequences:

>Translated_117_residues
MEHDILSIKSKEFALKIIRLCKIATKEKKEYIISKQLLKSGTSIGANIREAKFAESKKDFASKMSIALKETSETLYWIEL
LTESDYITPFESKDIKQDCLELLKILQSTVKTSKKAN
>Mature_117_residues
MEHDILSIKSKEFALKIIRLCKIATKEKKEYIISKQLLKSGTSIGANIREAKFAESKKDFASKMSIALKETSETLYWIEL
LTESDYITPFESKDIKQDCLELLKILQSTVKTSKKAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13377; Mature: 13377

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHDILSIKSKEFALKIIRLCKIATKEKKEYIISKQLLKSGTSIGANIREAKFAESKKDF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ASKMSIALKETSETLYWIELLTESDYITPFESKDIKQDCLELLKILQSTVKTSKKAN
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEHDILSIKSKEFALKIIRLCKIATKEKKEYIISKQLLKSGTSIGANIREAKFAESKKDF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ASKMSIALKETSETLYWIELLTESDYITPFESKDIKQDCLELLKILQSTVKTSKKAN
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA