| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210199
Identifier: 28210199
GI number: 28210199
Start: 443558
End: 444445
Strand: Direct
Name: 28210199
Synonym: CTC00446
Alternate gene names: NA
Gene position: 443558-444445 (Clockwise)
Preceding gene: 28210197
Following gene: 28210200
Centisome position: 15.85
GC content: 28.15
Gene sequence:
>888_bases ATGAGAATAGGTATACCAAAAGGACTTTTATATTACAAATATTATCCTTTTTATATGAATTTTTTTAAAAATTTAGGATT TGAAGTCATTACTTCGCCAGATACCAATGAAAAAATTTTAAACGATGGCATTAAAACCTGTGTAGATGAGAGTTGTCTTC CTGTAAAGGTATTTCATGGTCATTGTTCTTATTTAAAAGATAAATGTGATCTACTTTTTGTGCCAAGAATTATGCAAATC AATAAGGATGAATACATTTGTCCGAAATTTTGTGGATTAGTAGAAATGGTAGCAAATAGTATAGATGATATACCTCCTAT TATAAGCGAGCCCATTTACGCTTATGGAGAAAAAGAATTAAAAAAATGGGCTATTAAAACAGGAAACATTTTAGGAATAA ATAGAATGGTTACAAATAATGCTTTTAAAAAAGCACTAAAGGCTCAAAAACATTACATGGCAGGGATAAATAATGAAAAT TTTTCTAGAAAAATAGCATTAATAGGGCATCCTTACAATATATTTGATAATTATATAAATATGAATATAACAGAAAAATT AAATAAATTAGGTATAGGGGTTATTACAGAGGAGTATTTAGGGCAAAATCATATAAATCAAGAAGTAGAAAGATTATACA AAAAGCCATTTTGGACTTTTGTGAGAAATTCCTATGGTTTTGCTTCTTATATGACAAAAAATAAAATGATAGATGGTATA GTTTACATATCCTCCTTTGGATGTGGTGTAGACTCTGTTATTTTGGAGCTTATAAAGAATGAAGATGAAGAAGTTCCTAT ACTTGAAATTAAATTAGATGAACAAAGAGGAGAAGCTGGTATAGATACAAGACTAGAAGCTTTTTCTGACATGTTACAAA TATCTTAG
Upstream 100 bases:
>100_bases CATTGCTATATATAATATACCATAATTTAATATAGATGAATAAAATTTATATATTGGTCAATAATGTAAATGATTAAATT AAAATTAGGGGAGAAGAAAT
Downstream 100 bases:
>100_bases TTTAATAGAGAAAGGGATGGATAAAATTGAATATAACTTTTCCACACTTGGGGAATACTTGCTTTGCAATTAAAGCTCTT CTTGATGATTTAGACATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: BadF/BadG/BcrA/BcrD ATPase Family Protein; CoA Activase; 2-Hydroxyglutaryl-CoA Dehydratase Activator; CoA-Substrate-Specific Activase Domain Protein; CoA-Substrate-Specific Activase Domain-Containing Protein; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; Chaperone Protein DNAJ; Activator Of 2-Hydroxyglutaryl-CoA Dehydratase; Activator Of -2-Hydroxyglutaryl-CoA Dehydratase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MRIGIPKGLLYYKYYPFYMNFFKNLGFEVITSPDTNEKILNDGIKTCVDESCLPVKVFHGHCSYLKDKCDLLFVPRIMQI NKDEYICPKFCGLVEMVANSIDDIPPIISEPIYAYGEKELKKWAIKTGNILGINRMVTNNAFKKALKAQKHYMAGINNEN FSRKIALIGHPYNIFDNYINMNITEKLNKLGIGVITEEYLGQNHINQEVERLYKKPFWTFVRNSYGFASYMTKNKMIDGI VYISSFGCGVDSVILELIKNEDEEVPILEIKLDEQRGEAGIDTRLEAFSDMLQIS
Sequences:
>Translated_295_residues MRIGIPKGLLYYKYYPFYMNFFKNLGFEVITSPDTNEKILNDGIKTCVDESCLPVKVFHGHCSYLKDKCDLLFVPRIMQI NKDEYICPKFCGLVEMVANSIDDIPPIISEPIYAYGEKELKKWAIKTGNILGINRMVTNNAFKKALKAQKHYMAGINNEN FSRKIALIGHPYNIFDNYINMNITEKLNKLGIGVITEEYLGQNHINQEVERLYKKPFWTFVRNSYGFASYMTKNKMIDGI VYISSFGCGVDSVILELIKNEDEEVPILEIKLDEQRGEAGIDTRLEAFSDMLQIS >Mature_295_residues MRIGIPKGLLYYKYYPFYMNFFKNLGFEVITSPDTNEKILNDGIKTCVDESCLPVKVFHGHCSYLKDKCDLLFVPRIMQI NKDEYICPKFCGLVEMVANSIDDIPPIISEPIYAYGEKELKKWAIKTGNILGINRMVTNNAFKKALKAQKHYMAGINNEN FSRKIALIGHPYNIFDNYINMNITEKLNKLGIGVITEEYLGQNHINQEVERLYKKPFWTFVRNSYGFASYMTKNKMIDGI VYISSFGCGVDSVILELIKNEDEEVPILEIKLDEQRGEAGIDTRLEAFSDMLQIS
Specific function: Unknown
COG id: COG3580
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33931; Mature: 33931
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGIPKGLLYYKYYPFYMNFFKNLGFEVITSPDTNEKILNDGIKTCVDESCLPVKVFHG CCCCCCCCCHHEEHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECC HCSYLKDKCDLLFVPRIMQINKDEYICPKFCGLVEMVANSIDDIPPIISEPIYAYGEKEL HHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHH KKWAIKTGNILGINRMVTNNAFKKALKAQKHYMAGINNENFSRKIALIGHPYNIFDNYIN HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCC MNITEKLNKLGIGVITEEYLGQNHINQEVERLYKKPFWTFVRNSYGFASYMTKNKMIDGI CCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHE VYISSFGCGVDSVILELIKNEDEEVPILEIKLDEQRGEAGIDTRLEAFSDMLQIS EEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRIGIPKGLLYYKYYPFYMNFFKNLGFEVITSPDTNEKILNDGIKTCVDESCLPVKVFHG CCCCCCCCCHHEEHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECC HCSYLKDKCDLLFVPRIMQINKDEYICPKFCGLVEMVANSIDDIPPIISEPIYAYGEKEL HHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCHHHCCHHHH KKWAIKTGNILGINRMVTNNAFKKALKAQKHYMAGINNENFSRKIALIGHPYNIFDNYIN HHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCC MNITEKLNKLGIGVITEEYLGQNHINQEVERLYKKPFWTFVRNSYGFASYMTKNKMIDGI CCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHE VYISSFGCGVDSVILELIKNEDEEVPILEIKLDEQRGEAGIDTRLEAFSDMLQIS EEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA