| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is hisE
Identifier: 28210185
GI number: 28210185
Start: 429283
End: 429606
Strand: Direct
Name: hisE
Synonym: CTC00432
Alternate gene names: 28210185
Gene position: 429283-429606 (Clockwise)
Preceding gene: 28210184
Following gene: 28210187
Centisome position: 15.34
GC content: 24.69
Gene sequence:
>324_bases ATGGAAGTCAATAAATTAATAGAGGAATTAGTAGAAGTTATAAAAGACAGAAAGAATGACATAATATTCTCTTATTTATT TGAAGAAGAATCGGATAAAATATTAAAAAAAATAGGCGAGAAAAGCTCAGAGGTTATAATTGCTTGTAAAAATGCATCAA AAGAAGAGCAAGTACATGAAATATCTGATTTAATATATAATCTAATGGTTCTTATGATGAAACAGAATATAGAAATTGAA AATGTAATAGAAGAACTAGGAAAAAGAAGAAATATGACTTTAAATAAAAAATCTACAAAATCCGTATATCCAAGTATTCA CTAA
Upstream 100 bases:
>100_bases TTGAATTTTATATAAGAGACTAAATAGGATGTAATTTTAAGTAGAATCTTGGAGAATATATAAAAGAGAAAAGAAAAAAT ATTAAAGGAGAGATATTTTT
Downstream 100 bases:
>100_bases AAGAATTTAAATAGAGTAACATAAACTTATAGATGACATATATTATTAATATATAAAATACATTAAGAAGAACGTAGATA AAAGATAAAATGGGAAACTT
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MEVNKLIEELVEVIKDRKNDIIFSYLFEEESDKILKKIGEKSSEVIIACKNASKEEQVHEISDLIYNLMVLMMKQNIEIE NVIEELGKRRNMTLNKKSTKSVYPSIH
Sequences:
>Translated_107_residues MEVNKLIEELVEVIKDRKNDIIFSYLFEEESDKILKKIGEKSSEVIIACKNASKEEQVHEISDLIYNLMVLMMKQNIEIE NVIEELGKRRNMTLNKKSTKSVYPSIH >Mature_107_residues MEVNKLIEELVEVIKDRKNDIIFSYLFEEESDKILKKIGEKSSEVIIACKNASKEEQVHEISDLIYNLMVLMMKQNIEIE NVIEELGKRRNMTLNKKSTKSVYPSIH
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_CLOTE (Q898L3)
Other databases:
- EMBL: AE015927 - RefSeq: NP_781129.1 - ProteinModelPortal: Q898L3 - SMR: Q898L3 - GeneID: 1060034 - GenomeReviews: AE015927_GR - KEGG: ctc:CTC00432 - NMPDR: fig|212717.1.peg.351 - HOGENOM: HBG646527 - OMA: IACKNAS - BioCyc: CTET212717:CTC_00432-MONOMER - BRENDA: 3.6.1.31 - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 12529; Mature: 12529
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNKLIEELVEVIKDRKNDIIFSYLFEEESDKILKKIGEKSSEVIIACKNASKEEQVHE CCHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH ISDLIYNLMVLMMKQNIEIENVIEELGKRRNMTLNKKSTKSVYPSIH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEVNKLIEELVEVIKDRKNDIIFSYLFEEESDKILKKIGEKSSEVIIACKNASKEEQVHE CCHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH ISDLIYNLMVLMMKQNIEIENVIEELGKRRNMTLNKKSTKSVYPSIH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129