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The map label for this gene is yicO [C]

Identifier: 28210187

GI number: 28210187

Start: 430438

End: 431733

Strand: Direct

Name: yicO [C]

Synonym: CTC00434

Alternate gene names: 28210187

Gene position: 430438-431733 (Clockwise)

Preceding gene: 28210185

Following gene: 28210190

Centisome position: 15.38

GC content: 29.24

Gene sequence:

>1296_bases
ATGAAAAAAATAATTGAAAAAATATTTTACTTAACAAAATATAAAACCACAGTTAGGGGAGAGTTATTGGCTGGATTAAC
AGGATTTTTTTCTGTTGTTTATATTATAGCTGTTAATTCATCGATACTTTCTGACGCGGGTATAGCCCTAGAAGCAGGAA
TTATAGCCACTATATTGGCATCCTTCTTAGGTTGTATGATAATGGGTTTTTTAGGCAATGCACCTATTATGATGGTACCA
GGTATGGGAGTAAATGCTCTATTTTCCTATACTATTATAAAATCTATGGGGCTTTCTGTAACAGAAGCTTTAACAGCAGT
GTTTATAGCAGGTATAATATTCTCAGCAATAACCTTTACTAAACTTGGGGATATTATAACAAAGTCTATTTCACACTCAT
TAAAAGAAGCTATAACAGTAGGAATAGGAATATTTATAACCTTCATAGGATTTCAAAAGGGTGGAATAATAGTGGCACAT
CAAAGTAACTTTGTAACTTTAGCAGACTTAAAAAATCCATTAGTATTAGCGACCCTTATAAATCTAGCTATAACATTATT
TCTATTCATAAAAGATATAAAAGGAAATTTTTTAATAAGTATAATTTTAGGTACAGGAGTTTCCTATTTACTGGGGTTAG
TGGATTTATACTCAATAAGCTTTGGGGGAGTAAGTTTTAAAGGTTATGAAAATGTGTTTTTTAAATTAGATTTTGGGGGA
CTAACATCTATAAGCTTTTGGACAGCAGTATTTTCATTGGTATTAGTATTAGTTTTTGAAAATTTAGGACTTCTTAATGG
ATATGTAAATATTATGCTTAAACAACCAGAAAAATTTAAAAACTCTTTTAAATCCACAGCCTTATCTTCAATTACTTGTG
GCATTTTAGGAACTAGTCCCACTATAGCTACTGTGGAAAGTGCAGCGGCTATTGCAGCTGGAGGAAAAACAGGTTTAACT
TCTATATTTACAGGAATCTTATTTATTTTTTCAATATTTTTCCTTCCACTTATAAAAGTTATTCCAAATTCAGCTGTAGC
ACCAATACTTATAATTATAGGAAGTTTAATGATTAAAAATGTTTTAAATATAAACTTTAAAGACTATACAGAAGGATTTC
CAGCCTTTTTAATTATAACTATGATTCCATTAACTTATAGCATAGTAGATGGTATGGCATTTGGTTTTATAGCATATCCT
ATTGCTAAATTAGCTGCAAATAAAAAAGAAGATGTTTCTTTACCAATGTATATAATATCAATTATATTTTTAATTAATTT
CATACTTAGTGTTTGA

Upstream 100 bases:

>100_bases
TTCCTTAAGTTTCATTTTAATATATCCTTTGATATAATAATTATTACATCATTATTAATAATGAGGGTGGGTTGAGGGGA
TATGAGAAAGGTAAGAAAAA

Downstream 100 bases:

>100_bases
CAGCACATAATAATATTGTATAATAATAACTCCTTGTCATTGAACCAATCCTTCGATTGGTTTCCATTCTTGTAATGGAA
TCATAATATAATAAACTTCA

Product: xanthine/uracil permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKKIIEKIFYLTKYKTTVRGELLAGLTGFFSVVYIIAVNSSILSDAGIALEAGIIATILASFLGCMIMGFLGNAPIMMVP
GMGVNALFSYTIIKSMGLSVTEALTAVFIAGIIFSAITFTKLGDIITKSISHSLKEAITVGIGIFITFIGFQKGGIIVAH
QSNFVTLADLKNPLVLATLINLAITLFLFIKDIKGNFLISIILGTGVSYLLGLVDLYSISFGGVSFKGYENVFFKLDFGG
LTSISFWTAVFSLVLVLVFENLGLLNGYVNIMLKQPEKFKNSFKSTALSSITCGILGTSPTIATVESAAAIAAGGKTGLT
SIFTGILFIFSIFFLPLIKVIPNSAVAPILIIIGSLMIKNVLNINFKDYTEGFPAFLIITMIPLTYSIVDGMAFGFIAYP
IAKLAANKKEDVSLPMYIISIIFLINFILSV

Sequences:

>Translated_431_residues
MKKIIEKIFYLTKYKTTVRGELLAGLTGFFSVVYIIAVNSSILSDAGIALEAGIIATILASFLGCMIMGFLGNAPIMMVP
GMGVNALFSYTIIKSMGLSVTEALTAVFIAGIIFSAITFTKLGDIITKSISHSLKEAITVGIGIFITFIGFQKGGIIVAH
QSNFVTLADLKNPLVLATLINLAITLFLFIKDIKGNFLISIILGTGVSYLLGLVDLYSISFGGVSFKGYENVFFKLDFGG
LTSISFWTAVFSLVLVLVFENLGLLNGYVNIMLKQPEKFKNSFKSTALSSITCGILGTSPTIATVESAAAIAAGGKTGLT
SIFTGILFIFSIFFLPLIKVIPNSAVAPILIIIGSLMIKNVLNINFKDYTEGFPAFLIITMIPLTYSIVDGMAFGFIAYP
IAKLAANKKEDVSLPMYIISIIFLINFILSV
>Mature_431_residues
MKKIIEKIFYLTKYKTTVRGELLAGLTGFFSVVYIIAVNSSILSDAGIALEAGIIATILASFLGCMIMGFLGNAPIMMVP
GMGVNALFSYTIIKSMGLSVTEALTAVFIAGIIFSAITFTKLGDIITKSISHSLKEAITVGIGIFITFIGFQKGGIIVAH
QSNFVTLADLKNPLVLATLINLAITLFLFIKDIKGNFLISIILGTGVSYLLGLVDLYSISFGGVSFKGYENVFFKLDFGG
LTSISFWTAVFSLVLVLVFENLGLLNGYVNIMLKQPEKFKNSFKSTALSSITCGILGTSPTIATVESAAAIAAGGKTGLT
SIFTGILFIFSIFFLPLIKVIPNSAVAPILIIIGSLMIKNVLNINFKDYTEGFPAFLIITMIPLTYSIVDGMAFGFIAYP
IAKLAANKKEDVSLPMYIISIIFLINFILSV

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=437, Percent_Identity=31.8077803203661, Blast_Score=224, Evalue=9e-60,
Organism=Escherichia coli, GI1790150, Length=432, Percent_Identity=31.9444444444444, Blast_Score=218, Evalue=8e-58,
Organism=Escherichia coli, GI1790499, Length=430, Percent_Identity=29.5348837209302, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI48994909, Length=434, Percent_Identity=29.2626728110599, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46210; Mature: 46210

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIEKIFYLTKYKTTVRGELLAGLTGFFSVVYIIAVNSSILSDAGIALEAGIIATILA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
SFLGCMIMGFLGNAPIMMVPGMGVNALFSYTIIKSMGLSVTEALTAVFIAGIIFSAITFT
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KLGDIITKSISHSLKEAITVGIGIFITFIGFQKGGIIVAHQSNFVTLADLKNPLVLATLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHH
NLAITLFLFIKDIKGNFLISIILGTGVSYLLGLVDLYSISFGGVSFKGYENVFFKLDFGG
HHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCC
LTSISFWTAVFSLVLVLVFENLGLLNGYVNIMLKQPEKFKNSFKSTALSSITCGILGTSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCC
TIATVESAAAIAAGGKTGLTSIFTGILFIFSIFFLPLIKVIPNSAVAPILIIIGSLMIKN
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VLNINFKDYTEGFPAFLIITMIPLTYSIVDGMAFGFIAYPIAKLAANKKEDVSLPMYIIS
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IIFLINFILSV
HHHHHHHHHCC
>Mature Secondary Structure
MKKIIEKIFYLTKYKTTVRGELLAGLTGFFSVVYIIAVNSSILSDAGIALEAGIIATILA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
SFLGCMIMGFLGNAPIMMVPGMGVNALFSYTIIKSMGLSVTEALTAVFIAGIIFSAITFT
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KLGDIITKSISHSLKEAITVGIGIFITFIGFQKGGIIVAHQSNFVTLADLKNPLVLATLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHH
NLAITLFLFIKDIKGNFLISIILGTGVSYLLGLVDLYSISFGGVSFKGYENVFFKLDFGG
HHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCC
LTSISFWTAVFSLVLVLVFENLGLLNGYVNIMLKQPEKFKNSFKSTALSSITCGILGTSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHEEEEECCCC
TIATVESAAAIAAGGKTGLTSIFTGILFIFSIFFLPLIKVIPNSAVAPILIIIGSLMIKN
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VLNINFKDYTEGFPAFLIITMIPLTYSIVDGMAFGFIAYPIAKLAANKKEDVSLPMYIIS
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IIFLINFILSV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]