Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210174

Identifier: 28210174

GI number: 28210174

Start: 416670

End: 418277

Strand: Direct

Name: 28210174

Synonym: CTC00421

Alternate gene names: NA

Gene position: 416670-418277 (Clockwise)

Preceding gene: 28210173

Following gene: 28210176

Centisome position: 14.89

GC content: 24.88

Gene sequence:

>1608_bases
TTGAAAATAAATATATTAGCATATGTTGGTAAGATTAGGAGGAAGTTTATGGAACTGCGAATGTTTCACTTCATTGATAA
GTCTCTTGCACATTTAAGAGACTTAGAGGAAGATTTAGAAAATGTATGTAAAGAAATAGAGGTGTATTTTGAGGAAACAC
TAGAAGGGGAAAATGGAGGGTTTTTAAATGTAAATTCAAGAGTTAAATCCCCTAAAAGTCTTAAAGAAAAGATAATAAGA
AATAATTACTATAAAAAATATGAATCTTCAGAAGAGTTATTTGAAAATCTTTCTGATCTAATAGGTATAAGAATTGAATG
TAGATTCATTGAAGATGAAAATAATATCTATGAAAAAATTAAAAAGAATTTTCATGAAAAAGATGAGGATGGTTATTATT
ATAATAAAATAAATGAGAATATAAAATTGGAATTAACAGGAGAGCAACCTCAACAACAAAGAAATGGATTTGAGATATTT
AGAATAGATGGTTTTTATGAATATGGAGAAAGAAAATTTAATTTTGAACTTCAGATAAAATCTCTAGTTAATATATTTTG
GGGAGAAATAGAACATAAAGTTATATATAAAAATAATAATTATATGTTAGAAGACAGTTTTTTTAGAAACATAATGGGTT
CTATTAAAAAGAATTTATCTATGATAGATAATCAACTATTACTTATTTATAAACAGGTTAATCAACTTAATACTATAGAT
CCTACCATTAGAAAATCACAGCTAGAGATGATGATGGCTAAAATAATCTATGATATCTTTTCTACAAAAATGAGAAATCA
TATGGGGTTAATTGTAGATTTTAGAAGATCCTGTGATGTTATAATGAAGTACATATTTAGAACAAATAATGCGGAAAATT
TAGAGGATTATAATCAAACTTTATTAAAGACCTTATCTAGATTAAATGAAATAGGTAAGAATGAAATGGATTTTACTAAG
AAAATAGAATTTGAGAGGCATATTTGTATAGAAGACGAGTTTTGTGGAATCATTGGAAATGTTATGTTAAATTCCATAAA
TGATGATTTCCAATGGAATTTATTCTTTAAAATGCTTTTTGAAATAGAATTAGGTAATAATGCAGAGGATTTCGAAGATT
TTATAGCATATTTTAAAGGAAGATTTTACAATAATAAAAGCTTTGCAAAACTACACTTTTTATTTGAAGAAGATCAAGTT
GAAAACATAGTAAATTCTATAATGAAGGAACTTGCTAATTGTTTTGTAGAAATCGATTCTATAAGTTTTATATATGAAGA
AAACATAGAAAACATAAATGGAGTAATAGATAATATAATCAAAATAATATTTGCTAATGTAAATAGTTTTGAAGAATGGG
AAAAGAGTAAAGATATTTACTTAGATTTCTTTAGATTTAAAGTTTTCTCTGTGTTTGATTATAAAGTAGGTGTAGAAAAT
GTAAAAGGATTTATAGAAAGAGTGAAAAATTCATCAGGAAGAATTCAAGTAAGTGAAGGAATATTAAAATACATAGACAA
GCTAGAATTATTATCGGAAATAACAGCAAGGGATGCACTGCAACTAATAAAATTAAGCAATATAAACGAAAATTCTCTAA
TAAAATGA

Upstream 100 bases:

>100_bases
GTTTTTATATGTAATATTTTATTGAAATTAATAAAAGTATAATTTTTGTTAAATTTTTTATTGATTTTACCATTTCTATG
TTGAATATGGTAAACTTATA

Downstream 100 bases:

>100_bases
TAAAAAGAGACAGGCTTTTCATGTTTTAAAGTCTGTCTCTTTTGAATTAATCTACCTTATACCATCCTCTTGAATGCATT
GCATTAAATAAGGTTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKINILAYVGKIRRKFMELRMFHFIDKSLAHLRDLEEDLENVCKEIEVYFEETLEGENGGFLNVNSRVKSPKSLKEKIIR
NNYYKKYESSEELFENLSDLIGIRIECRFIEDENNIYEKIKKNFHEKDEDGYYYNKINENIKLELTGEQPQQQRNGFEIF
RIDGFYEYGERKFNFELQIKSLVNIFWGEIEHKVIYKNNNYMLEDSFFRNIMGSIKKNLSMIDNQLLLIYKQVNQLNTID
PTIRKSQLEMMMAKIIYDIFSTKMRNHMGLIVDFRRSCDVIMKYIFRTNNAENLEDYNQTLLKTLSRLNEIGKNEMDFTK
KIEFERHICIEDEFCGIIGNVMLNSINDDFQWNLFFKMLFEIELGNNAEDFEDFIAYFKGRFYNNKSFAKLHFLFEEDQV
ENIVNSIMKELANCFVEIDSISFIYEENIENINGVIDNIIKIIFANVNSFEEWEKSKDIYLDFFRFKVFSVFDYKVGVEN
VKGFIERVKNSSGRIQVSEGILKYIDKLELLSEITARDALQLIKLSNINENSLIK

Sequences:

>Translated_535_residues
MKINILAYVGKIRRKFMELRMFHFIDKSLAHLRDLEEDLENVCKEIEVYFEETLEGENGGFLNVNSRVKSPKSLKEKIIR
NNYYKKYESSEELFENLSDLIGIRIECRFIEDENNIYEKIKKNFHEKDEDGYYYNKINENIKLELTGEQPQQQRNGFEIF
RIDGFYEYGERKFNFELQIKSLVNIFWGEIEHKVIYKNNNYMLEDSFFRNIMGSIKKNLSMIDNQLLLIYKQVNQLNTID
PTIRKSQLEMMMAKIIYDIFSTKMRNHMGLIVDFRRSCDVIMKYIFRTNNAENLEDYNQTLLKTLSRLNEIGKNEMDFTK
KIEFERHICIEDEFCGIIGNVMLNSINDDFQWNLFFKMLFEIELGNNAEDFEDFIAYFKGRFYNNKSFAKLHFLFEEDQV
ENIVNSIMKELANCFVEIDSISFIYEENIENINGVIDNIIKIIFANVNSFEEWEKSKDIYLDFFRFKVFSVFDYKVGVEN
VKGFIERVKNSSGRIQVSEGILKYIDKLELLSEITARDALQLIKLSNINENSLIK
>Mature_535_residues
MKINILAYVGKIRRKFMELRMFHFIDKSLAHLRDLEEDLENVCKEIEVYFEETLEGENGGFLNVNSRVKSPKSLKEKIIR
NNYYKKYESSEELFENLSDLIGIRIECRFIEDENNIYEKIKKNFHEKDEDGYYYNKINENIKLELTGEQPQQQRNGFEIF
RIDGFYEYGERKFNFELQIKSLVNIFWGEIEHKVIYKNNNYMLEDSFFRNIMGSIKKNLSMIDNQLLLIYKQVNQLNTID
PTIRKSQLEMMMAKIIYDIFSTKMRNHMGLIVDFRRSCDVIMKYIFRTNNAENLEDYNQTLLKTLSRLNEIGKNEMDFTK
KIEFERHICIEDEFCGIIGNVMLNSINDDFQWNLFFKMLFEIELGNNAEDFEDFIAYFKGRFYNNKSFAKLHFLFEEDQV
ENIVNSIMKELANCFVEIDSISFIYEENIENINGVIDNIIKIIFANVNSFEEWEKSKDIYLDFFRFKVFSVFDYKVGVEN
VKGFIERVKNSSGRIQVSEGILKYIDKLELLSEITARDALQLIKLSNINENSLIK

Specific function: Unknown

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63830; Mature: 63830

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINILAYVGKIRRKFMELRMFHFIDKSLAHLRDLEEDLENVCKEIEVYFEETLEGENGG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLNVNSRVKSPKSLKEKIIRNNYYKKYESSEELFENLSDLIGIRIECRFIEDENNIYEKI
EEEECCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHH
KKNFHEKDEDGYYYNKINENIKLELTGEQPQQQRNGFEIFRIDGFYEYGERKFNFELQIK
HHHCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCCCEEEEECCCHHHCCEEEEEEEEHH
SLVNIFWGEIEHKVIYKNNNYMLEDSFFRNIMGSIKKNLSMIDNQLLLIYKQVNQLNTID
HHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PTIRKSQLEMMMAKIIYDIFSTKMRNHMGLIVDFRRSCDVIMKYIFRTNNAENLEDYNQT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLKTLSRLNEIGKNEMDFTKKIEFERHICIEDEFCGIIGNVMLNSINDDFQWNLFFKMLF
HHHHHHHHHHCCCCCCCHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EIELGNNAEDFEDFIAYFKGRFYNNKSFAKLHFLFEEDQVENIVNSIMKELANCFVEIDS
HEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHEEHHH
ISFIYEENIENINGVIDNIIKIIFANVNSFEEWEKSKDIYLDFFRFKVFSVFDYKVGVEN
HHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
VKGFIERVKNSSGRIQVSEGILKYIDKLELLSEITARDALQLIKLSNINENSLIK
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKINILAYVGKIRRKFMELRMFHFIDKSLAHLRDLEEDLENVCKEIEVYFEETLEGENGG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLNVNSRVKSPKSLKEKIIRNNYYKKYESSEELFENLSDLIGIRIECRFIEDENNIYEKI
EEEECCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCEEEEEEEECCCHHHHHHH
KKNFHEKDEDGYYYNKINENIKLELTGEQPQQQRNGFEIFRIDGFYEYGERKFNFELQIK
HHHCCCCCCCCEEEEECCCCEEEEECCCCCHHHCCCCEEEEECCCHHHCCEEEEEEEEHH
SLVNIFWGEIEHKVIYKNNNYMLEDSFFRNIMGSIKKNLSMIDNQLLLIYKQVNQLNTID
HHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PTIRKSQLEMMMAKIIYDIFSTKMRNHMGLIVDFRRSCDVIMKYIFRTNNAENLEDYNQT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLKTLSRLNEIGKNEMDFTKKIEFERHICIEDEFCGIIGNVMLNSINDDFQWNLFFKMLF
HHHHHHHHHHCCCCCCCHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EIELGNNAEDFEDFIAYFKGRFYNNKSFAKLHFLFEEDQVENIVNSIMKELANCFVEIDS
HEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHEEHHH
ISFIYEENIENINGVIDNIIKIIFANVNSFEEWEKSKDIYLDFFRFKVFSVFDYKVGVEN
HHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
VKGFIERVKNSSGRIQVSEGILKYIDKLELLSEITARDALQLIKLSNINENSLIK
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA