| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210145
Identifier: 28210145
GI number: 28210145
Start: 384103
End: 385182
Strand: Direct
Name: 28210145
Synonym: CTC00390
Alternate gene names: NA
Gene position: 384103-385182 (Clockwise)
Preceding gene: 28210143
Following gene: 28210146
Centisome position: 13.72
GC content: 27.22
Gene sequence:
>1080_bases ATGAAGATATCAGATTTTATATTCAAATTTTCAACTAGCACAGTTTCAAACCGTGATGGTTTATGTCGGATAAGAATTTT TGTAGGGGACAATAAAATAATCACATTAATAACTGATATAGGTAACTTAAATCCATCTGAGTCAGTAACAAATTCAATAG AAAAGATAAGGTTATTATTGATACAAAAAGGACTAGTTAATGAAAAATCAATTTTTATAGAACATTATGAGAAAGAAAAG TTTAGTAATGCAAGTTTTGATATTGTAGAATTTCATGACAATGGGAGTCCTAGCTGGTATCCTATAACAAAAGAAAAATT AAAAGAATTATTAGATTGTGATGATAAGGAGTTATCTGATTTAACTAAAAAGAATAAAAGGTTACTTTCAGAAATTGGCA GAATTATATATGCTGTTAATCCGAGAAATGATTTTTGTTGTCAGGAAAGTCCAGATATTATTAAAAGAAAACTTGAAATT GAAGAAAATAAAATAAGTAAAAGCGAACTTATCAAGATTATTGAAAGTGGAGCTAAAGAGCAAACTATTTCACAGCTACT TAAGTCAGATCTATCTATTTTTGCTGAAATATATGCTTGTCCTAAAGATGAGTATATTTGTTTTTCTGAGTTTCCTATAG ATGATGGGTATGTAGATTATCTGGTTCTAACGGGAAGATCAAGAATGGATGTATATCTTATTGAAATTAAAGGAGCAGAT TTTGATTTAGTTAACAAGAATAAAGAAAAATTCAATGAAAAAGTTAGTGAAGCTGATCATCAAATCAAAACTAGATTAGG GTTTATATATAGAAATTATGAGTTTTTTAGGAAAAATATACATGATGTAAGAAGAAAAGCAGAGAATGGAGAAATAGTGT TTAACTCTTTTAGAGGTGCAATAAATAATTTATATGTTGATCCTGATAAAGATATAAATATATATTCAGTTATAATAGGT GGAAGAACAGGTGACGATTATGAAGAAAGCAAACTTAGACATAATTATGAAATAGATAGTAAGTTTAAAACAAAATTAGA AACATGGGATACTTTCATAAGAAAACTGGTAAGAAGCTAA
Upstream 100 bases:
>100_bases GGATAATTGTTTTTAGTCAAACTTATTGTATTTCCTTATGGGAAGAAGAGCAATGTTCATATTAACTTAATAGAACGGAC TTTAATATTGGGGGAAATAT
Downstream 100 bases:
>100_bases AAATATAAATCAGTAGTTAAGTATTGCGTAACTAGAGATATTTTTAAATATAAGTAAATTCAAACAAAAAATTTGTGGGT TTTACCTATTTTACGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS
Sequences:
>Translated_359_residues MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS >Mature_359_residues MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLLIQKGLVNEKSIFIEHYEKEK FSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSDLTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEI EENKISKSELIKIIESGAKEQTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGAINNLYVDPDKDINIYSVIIG GRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41824; Mature: 41824
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLL CCCHHHHEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH IQKGLVNEKSIFIEHYEKEKFSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSD HHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCCCHHHHH LTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEIEENKISKSELIKIIESGAKE HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH QTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCC FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH INNLYVDPDKDINIYSVIIGGRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS HHCEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKISDFIFKFSTSTVSNRDGLCRIRIFVGDNKIITLITDIGNLNPSESVTNSIEKIRLLL CCCHHHHEEEECCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH IQKGLVNEKSIFIEHYEKEKFSNASFDIVEFHDNGSPSWYPITKEKLKELLDCDDKELSD HHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHCCCCHHHHH LTKKNKRLLSEIGRIIYAVNPRNDFCCQESPDIIKRKLEIEENKISKSELIKIIESGAKE HHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH QTISQLLKSDLSIFAEIYACPKDEYICFSEFPIDDGYVDYLVLTGRSRMDVYLIEIKGAD HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCC FDLVNKNKEKFNEKVSEADHQIKTRLGFIYRNYEFFRKNIHDVRRKAENGEIVFNSFRGA EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH INNLYVDPDKDINIYSVIIGGRTGDDYEESKLRHNYEIDSKFKTKLETWDTFIRKLVRS HHCEEECCCCCCEEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA