Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210143

Identifier: 28210143

GI number: 28210143

Start: 381459

End: 382745

Strand: Direct

Name: 28210143

Synonym: CTC00388

Alternate gene names: NA

Gene position: 381459-382745 (Clockwise)

Preceding gene: 28210142

Following gene: 28210145

Centisome position: 13.63

GC content: 26.34

Gene sequence:

>1287_bases
ATGAGTAAGAATAAAAATGATGTTGCATGGGAAACCCTATTCAATAAGTATAATATAATTTCTGAGATTGATAAGAATGG
AAAATTTGAAATATCAGCAAAAGAAATTAACGAAGTAAGAGAAGCTAGGTTAATGACTAAGTTTGACCATAAGGTGAATT
TGCCTAAAATATTTGCAGATAATAAATTATCAATACTACCTATTACAAGAGGCAAGTATGTAATATCTAAATTTGAAGCA
TATACTAAATTTGAAAATATAAATCCGGAAATTGTTAAAGTACAATTTCCGGAATATATCACCAGTATAGATTATGAAAA
TATAACTAGTGAAGCTATGGCTATTAATTGTGCCTATGTATCAGGAATAATACATGACTTTGTAGAGGATGAAGAGTTAG
TTCCAACTGTGAGTGGAAGAATGAGTTCGGATGAATTTAATTTTGAAATTAAAAACACAGGTATAAATAATAAGATGCAA
ATTGAAATTAAAAACTCACAGATAGAGATTGATGGTGGCTATGAGGGAATTGAAACGCTAATTTTAATTGAAGCAAAAAA
TTCTATATCTGATGATTTTATTATAAGACAGTTATATTATCCATATAGACTATGGAGCAGCAAGGTAGAAAAAAAAGTAA
AGCCAGTATTTATGGTATATTCAAATGGTATATATAGTTTTTATGAATATAGTTTTGAGGATGTTCAAAATTATAATTCT
TTAAAATTAGTAAAACAAAGAAACTATATAATTGAAGAGGTAGATATTTCATTATCGGATATCATACACATATTTAATAA
TACAATAGTTTTAGATGAGCCTAAAATTTCTTTCCCTCAAGCAGATAATTTTAATAGAGTTATTAATTTATGTGAGCTAT
TATGTAGAAATGAGATGAGTAAGGAAGAAATAACAGTAAATTATGATTTTGATCCAAGGCAGACAAATTACTATACTGAT
GCAGGAAGATATTTAGGATTAATTGATAAAAAAAGAAAAAATGGAGTTATTAAGTTTTTTTTAACGTCAGAAGGAAAAAA
ATTATTTAAATTAAGATATAAAGATAGACAGTTAAAATATGTTGAATTAATATTTAAACATAAACCTTTCAGAGAATGTT
TTGATGAATGCTTAAAAACAAGCGAAATACCTAATAGACAAGATATTGTTAAGATAATGGAAGATGCAGAAGTGTACAAT
GTACAAGCTAAAAGTACTTATAAAAGGAGAGCTTCAACAGTTACTAGATGGATTAATTGGATAATAGAATTAACTAAAAG
AGTATAA

Upstream 100 bases:

>100_bases
CTATATAAAGATTATAATATAAAAGTAGTCAAAGCTAAACGAACTATAAATTCAAATGGTAATTCTAGAGGGGCGGTAGA
TGAAGTATTGGTGAGAAATT

Downstream 100 bases:

>100_bases
TAATGTAATTTTAAATATATATTATTATAATGAACCTCTTATCTATATTAAGAAAATATAGAATCTGTTAAGTAGATATG
AAAAAATATCTTTAAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSKNKNDVAWETLFNKYNIISEIDKNGKFEISAKEINEVREARLMTKFDHKVNLPKIFADNKLSILPITRGKYVISKFEA
YTKFENINPEIVKVQFPEYITSIDYENITSEAMAINCAYVSGIIHDFVEDEELVPTVSGRMSSDEFNFEIKNTGINNKMQ
IEIKNSQIEIDGGYEGIETLILIEAKNSISDDFIIRQLYYPYRLWSSKVEKKVKPVFMVYSNGIYSFYEYSFEDVQNYNS
LKLVKQRNYIIEEVDISLSDIIHIFNNTIVLDEPKISFPQADNFNRVINLCELLCRNEMSKEEITVNYDFDPRQTNYYTD
AGRYLGLIDKKRKNGVIKFFLTSEGKKLFKLRYKDRQLKYVELIFKHKPFRECFDECLKTSEIPNRQDIVKIMEDAEVYN
VQAKSTYKRRASTVTRWINWIIELTKRV

Sequences:

>Translated_428_residues
MSKNKNDVAWETLFNKYNIISEIDKNGKFEISAKEINEVREARLMTKFDHKVNLPKIFADNKLSILPITRGKYVISKFEA
YTKFENINPEIVKVQFPEYITSIDYENITSEAMAINCAYVSGIIHDFVEDEELVPTVSGRMSSDEFNFEIKNTGINNKMQ
IEIKNSQIEIDGGYEGIETLILIEAKNSISDDFIIRQLYYPYRLWSSKVEKKVKPVFMVYSNGIYSFYEYSFEDVQNYNS
LKLVKQRNYIIEEVDISLSDIIHIFNNTIVLDEPKISFPQADNFNRVINLCELLCRNEMSKEEITVNYDFDPRQTNYYTD
AGRYLGLIDKKRKNGVIKFFLTSEGKKLFKLRYKDRQLKYVELIFKHKPFRECFDECLKTSEIPNRQDIVKIMEDAEVYN
VQAKSTYKRRASTVTRWINWIIELTKRV
>Mature_427_residues
SKNKNDVAWETLFNKYNIISEIDKNGKFEISAKEINEVREARLMTKFDHKVNLPKIFADNKLSILPITRGKYVISKFEAY
TKFENINPEIVKVQFPEYITSIDYENITSEAMAINCAYVSGIIHDFVEDEELVPTVSGRMSSDEFNFEIKNTGINNKMQI
EIKNSQIEIDGGYEGIETLILIEAKNSISDDFIIRQLYYPYRLWSSKVEKKVKPVFMVYSNGIYSFYEYSFEDVQNYNSL
KLVKQRNYIIEEVDISLSDIIHIFNNTIVLDEPKISFPQADNFNRVINLCELLCRNEMSKEEITVNYDFDPRQTNYYTDA
GRYLGLIDKKRKNGVIKFFLTSEGKKLFKLRYKDRQLKYVELIFKHKPFRECFDECLKTSEIPNRQDIVKIMEDAEVYNV
QAKSTYKRRASTVTRWINWIIELTKRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50473; Mature: 50342

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKNDVAWETLFNKYNIISEIDKNGKFEISAKEINEVREARLMTKFDHKVNLPKIFAD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECC
NKLSILPITRGKYVISKFEAYTKFENINPEIVKVQFPEYITSIDYENITSEAMAINCAYV
CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCCHHHEEEHHHH
SGIIHDFVEDEELVPTVSGRMSSDEFNFEIKNTGINNKMQIEIKNSQIEIDGGYEGIETL
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCCCEEEE
ILIEAKNSISDDFIIRQLYYPYRLWSSKVEKKVKPVFMVYSNGIYSFYEYSFEDVQNYNS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCCCC
LKLVKQRNYIIEEVDISLSDIIHIFNNTIVLDEPKISFPQADNFNRVINLCELLCRNEMS
EEEEHHCCCEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
KEEITVNYDFDPRQTNYYTDAGRYLGLIDKKRKNGVIKFFLTSEGKKLFKLRYKDRQLKY
CCEEEEEECCCCCCCCEECCCCCEEECEECCCCCCEEEEEEECCCCEEEEEECCCCCHHH
VELIFKHKPFRECFDECLKTSEIPNRQDIVKIMEDAEVYNVQAKSTYKRRASTVTRWINW
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHH
IIELTKRV
HHHHHHCC
>Mature Secondary Structure 
SKNKNDVAWETLFNKYNIISEIDKNGKFEISAKEINEVREARLMTKFDHKVNLPKIFAD
CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECC
NKLSILPITRGKYVISKFEAYTKFENINPEIVKVQFPEYITSIDYENITSEAMAINCAYV
CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCCHHHEEEHHHH
SGIIHDFVEDEELVPTVSGRMSSDEFNFEIKNTGINNKMQIEIKNSQIEIDGGYEGIETL
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEECCCCCCEEEE
ILIEAKNSISDDFIIRQLYYPYRLWSSKVEKKVKPVFMVYSNGIYSFYEYSFEDVQNYNS
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCHHHHCCCCC
LKLVKQRNYIIEEVDISLSDIIHIFNNTIVLDEPKISFPQADNFNRVINLCELLCRNEMS
EEEEHHCCCEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
KEEITVNYDFDPRQTNYYTDAGRYLGLIDKKRKNGVIKFFLTSEGKKLFKLRYKDRQLKY
CCEEEEEECCCCCCCCEECCCCCEEECEECCCCCCEEEEEEECCCCEEEEEECCCCCHHH
VELIFKHKPFRECFDECLKTSEIPNRQDIVKIMEDAEVYNVQAKSTYKRRASTVTRWINW
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHH
IIELTKRV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA