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The map label for this gene is cggR [H]

Identifier: 28210133

GI number: 28210133

Start: 366471

End: 367499

Strand: Direct

Name: cggR [H]

Synonym: CTC00377

Alternate gene names: 28210133

Gene position: 366471-367499 (Clockwise)

Preceding gene: 28210132

Following gene: 28210134

Centisome position: 13.09

GC content: 28.96

Gene sequence:

>1029_bases
TTGAATTTGGAAGACTTATTAAAACTACAACAGAAAATTATTCCAGAGGGCATAGAGCTTTTGGAAAGAAGATATATAAT
ACTTAGAAATATATACTATAGCCAACCTGTTGGTAGAAGACTACTTTCTAGAAATTTAAACCTAAGTGAAAGAATTATAA
GAACAGAGGTTAATTTTTTAAAAGAACAAGGTTTTATTGAAATAAATACACCTGGAATGGTAATTACTAAATTAGGAGAA
GAATTAATAAGCAAATTAAAAGAATTTGTATATATGATAAAAGGTCTTTCTACACTAGAATTTAGAATAAAAGAAAGACT
AGGTTTAAAAAAAGTTATTATAGTTCCAGGAAATATAGAAGAAGATAGTTCTGTTTTAAAGGAGTTGGGAAAAGCTGCAT
CCAATTGTTTTAAAGATCTATTAAAAAATGGAGACGTAGTTGCCCTAACTGGAGGAAGTACTATAAAAAGCTTTGTAGAT
AATATAGCAAGATGTAATAATTATGAAGATATAACCATAGTGCCTGCAAGAGGTGGTATGGGGAAAAAACTTGAAACTCA
ATCAAATACTTTAGTATCTAATTTGGCAATTAAATGTAATTGGAATTATAGACTTCTTCATGTTCCAGATAATTTAGGTA
TAGAAGCAGCTAAAATTATAATGAAAGAAAAAGATGTAATAGAAGTTATGAACATAATAGAGGATGCAGATATTTTAATA
TACGGCGTAGGAAGAGCCGATGAAATGGCAAAAAGAAGAGGAATGTCAGAACAAAATATCGCAAAATTATTAGAAAAAGG
GGCTTTAGGTGAAGCTTTTGGTCATTATTTTAATAAAAATGGAGAAATAGTTTACTCTACATCTACCATGGGAATAAAAA
ATGAAAAGGTAGAAAACATAAAAAATATAATAGCTATAGGTGGTGGTGCTTCTAAAGCAGAAGCTATAATAGCCACTCAA
TTAAATAAGCCAAATGGTATATTGATTACCGATGAAGGTGCAAGTAAGAGTATATTAAATATTCTTTGA

Upstream 100 bases:

>100_bases
AAAAAATTTGATTTAACTATTGGAATTTATTGTGCTTTGTTCTATAATAGAAGTGGGATTAAAAAGAAAGTAGCGGGACA
ATAAACGGCCAAAGGGGTGC

Downstream 100 bases:

>100_bases
TTTAAGTAGCATACAAAAGCAAAACGCTTTTAAGTATTAATATATCTATAATTCATCAAATTTAAAACTTTTAAAAATTT
AAGGAGGTCTTTTAAATGGT

Product: putative central glycolytic genes regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSERIIRTEVNFLKEQGFIEINTPGMVITKLGE
ELISKLKEFVYMIKGLSTLEFRIKERLGLKKVIIVPGNIEEDSSVLKELGKAASNCFKDLLKNGDVVALTGGSTIKSFVD
NIARCNNYEDITIVPARGGMGKKLETQSNTLVSNLAIKCNWNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILI
YGVGRADEMAKRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENIKNIIAIGGGASKAEAIIATQ
LNKPNGILITDEGASKSILNIL

Sequences:

>Translated_342_residues
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSERIIRTEVNFLKEQGFIEINTPGMVITKLGE
ELISKLKEFVYMIKGLSTLEFRIKERLGLKKVIIVPGNIEEDSSVLKELGKAASNCFKDLLKNGDVVALTGGSTIKSFVD
NIARCNNYEDITIVPARGGMGKKLETQSNTLVSNLAIKCNWNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILI
YGVGRADEMAKRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENIKNIIAIGGGASKAEAIIATQ
LNKPNGILITDEGASKSILNIL
>Mature_342_residues
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSERIIRTEVNFLKEQGFIEINTPGMVITKLGE
ELISKLKEFVYMIKGLSTLEFRIKERLGLKKVIIVPGNIEEDSSVLKELGKAASNCFKDLLKNGDVVALTGGSTIKSFVD
NIARCNNYEDITIVPARGGMGKKLETQSNTLVSNLAIKCNWNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILI
YGVGRADEMAKRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENIKNIIAIGGGASKAEAIIATQ
LNKPNGILITDEGASKSILNIL

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=259, Percent_Identity=24.3243243243243, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 38037; Mature: 38037

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSERIIRTEVNFL
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
KEQGFIEINTPGMVITKLGEELISKLKEFVYMIKGLSTLEFRIKERLGLKKVIIVPGNIE
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCC
EDSSVLKELGKAASNCFKDLLKNGDVVALTGGSTIKSFVDNIARCNNYEDITIVPARGGM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCC
GKKLETQSNTLVSNLAIKCNWNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILI
CCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
YGVGRADEMAKRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENI
EECCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
KNIIAIGGGASKAEAIIATQLNKPNGILITDEGASKSILNIL
HHEEEECCCCCHHHEEEEEECCCCCCEEEECCCCCCHHHHCC
>Mature Secondary Structure
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSERIIRTEVNFL
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
KEQGFIEINTPGMVITKLGEELISKLKEFVYMIKGLSTLEFRIKERLGLKKVIIVPGNIE
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCC
EDSSVLKELGKAASNCFKDLLKNGDVVALTGGSTIKSFVDNIARCNNYEDITIVPARGGM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCC
GKKLETQSNTLVSNLAIKCNWNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILI
CCCCCCCCCCEEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
YGVGRADEMAKRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENI
EECCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
KNIIAIGGGASKAEAIIATQLNKPNGILITDEGASKSILNIL
HHEEEECCCCCHHHEEEEEECCCCCCEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]