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The map label for this gene is rbsC [H]

Identifier: 28210128

GI number: 28210128

Start: 359899

End: 360819

Strand: Direct

Name: rbsC [H]

Synonym: CTC00372

Alternate gene names: 28210128

Gene position: 359899-360819 (Clockwise)

Preceding gene: 28210127

Following gene: 28210132

Centisome position: 12.86

GC content: 35.72

Gene sequence:

>921_bases
ATGAGTAGTATAGTAATGCTTATATCTGCTACCCTTAGGTTAGCAACTCCTTTAATATTTGCAGCACTTGGGGGAGTATT
TTCTGAGAAATCAGGAGTTGTAAATATTGCCCTTGAAGGAATAATGACTACAGGAGCATTTTTTGCCGTATATGGCTCAC
ATGTAACTGGAAACCCTTGGATGGGAATTTTATTTGCAATAATTTCAGGAGCTATTATGGCAGCTATTCATGCTTACTTA
AGTATACATTTAAAAGCAGATCAAATAGTTTCAGGTGTAGGTATAAACGTTTTTGCAGCAGCTTTAACTAGTTATTTAAT
AGTTAAATTCTTTAAAACAAATTCTCAAACAAGTGTTGTAAAATCACTACCATATCCAACAGAGGCTATGGGTAAAGTGC
CGGTAATAGGTGGAATTTTAAAGGAATTAAATTGGTTTGTATTTATAGCTATAGCTTTAGTAATTATTTCACATTTTGTA
TTATATAAAACACCATTGGGACTTAGAATAAGATCCGTTGGTGAGCATCCAAAAGCCGCTGACACTTTAGGAATAAGCGT
TTATGGTATAAGATACCTATGTGTAATATTATCCGGAGTTTTAGGAGCATTAGGAGGAGCTACTCTTTCTATAGGTATAA
TGAATCTATATAGGGAAAACATGGTTAGTGGTAGAGGGTTCATAGCCCTTGCAGCCATGATTTTTGGTAATTGGAAGCCT
GTAAATGCTATGTGGGCATCTATGCTTTTTGCCTTTGCAGAAACCTTCCAACTATTTGCTAAAGGTTTTGGATGGGCAAT
ACCAGGAGAGTTTTATGCAGCTTTTCCTTATATAATAACTATGTTTGCATTAGCAGGTTTTGTAGGAAAAACTCAAGCTC
CGGCGGCAGATGGAGTTCCTTATCAAAAAGGACAACGATAA

Upstream 100 bases:

>100_bases
ACTATAGTAAATTTAATTCAAGGTATAATAATTTTATTCATAGCTGGAGAATATGTATTTAGACTTATATCAGAAAGAAA
GAAAAAGGGGGCATTGTTAA

Downstream 100 bases:

>100_bases
ATGAGATAATTTATTTAATTTCATATAAAAAAGACTATCCAATAAATTTAACGGATAGTCTTTTCATATTATTTAATCTA
TTAACCCTTTTTTCCTTAAG

Product: ribose transport system permease protein rbsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSSIVMLISATLRLATPLIFAALGGVFSEKSGVVNIALEGIMTTGAFFAVYGSHVTGNPWMGILFAIISGAIMAAIHAYL
SIHLKADQIVSGVGINVFAAALTSYLIVKFFKTNSQTSVVKSLPYPTEAMGKVPVIGGILKELNWFVFIAIALVIISHFV
LYKTPLGLRIRSVGEHPKAADTLGISVYGIRYLCVILSGVLGALGGATLSIGIMNLYRENMVSGRGFIALAAMIFGNWKP
VNAMWASMLFAFAETFQLFAKGFGWAIPGEFYAAFPYIITMFALAGFVGKTQAPAADGVPYQKGQR

Sequences:

>Translated_306_residues
MSSIVMLISATLRLATPLIFAALGGVFSEKSGVVNIALEGIMTTGAFFAVYGSHVTGNPWMGILFAIISGAIMAAIHAYL
SIHLKADQIVSGVGINVFAAALTSYLIVKFFKTNSQTSVVKSLPYPTEAMGKVPVIGGILKELNWFVFIAIALVIISHFV
LYKTPLGLRIRSVGEHPKAADTLGISVYGIRYLCVILSGVLGALGGATLSIGIMNLYRENMVSGRGFIALAAMIFGNWKP
VNAMWASMLFAFAETFQLFAKGFGWAIPGEFYAAFPYIITMFALAGFVGKTQAPAADGVPYQKGQR
>Mature_305_residues
SSIVMLISATLRLATPLIFAALGGVFSEKSGVVNIALEGIMTTGAFFAVYGSHVTGNPWMGILFAIISGAIMAAIHAYLS
IHLKADQIVSGVGINVFAAALTSYLIVKFFKTNSQTSVVKSLPYPTEAMGKVPVIGGILKELNWFVFIAIALVIISHFVL
YKTPLGLRIRSVGEHPKAADTLGISVYGIRYLCVILSGVLGALGGATLSIGIMNLYRENMVSGRGFIALAAMIFGNWKPV
NAMWASMLFAFAETFQLFAKGFGWAIPGEFYAAFPYIITMFALAGFVGKTQAPAADGVPYQKGQR

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32625; Mature: 32494

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00318 HMG_COA_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIVMLISATLRLATPLIFAALGGVFSEKSGVVNIALEGIMTTGAFFAVYGSHVTGNPW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHH
MGILFAIISGAIMAAIHAYLSIHLKADQIVSGVGINVFAAALTSYLIVKFFKTNSQTSVV
HHHHHHHHHHHHHHHHHHHHHHEECHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
KSLPYPTEAMGKVPVIGGILKELNWFVFIAIALVIISHFVLYKTPLGLRIRSVGEHPKAA
HHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCH
DTLGISVYGIRYLCVILSGVLGALGGATLSIGIMNLYRENMVSGRGFIALAAMIFGNWKP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
VNAMWASMLFAFAETFQLFAKGFGWAIPGEFYAAFPYIITMFALAGFVGKTQAPAADGVP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YQKGQR
CCCCCC
>Mature Secondary Structure 
SSIVMLISATLRLATPLIFAALGGVFSEKSGVVNIALEGIMTTGAFFAVYGSHVTGNPW
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHH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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]