| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210118
Identifier: 28210118
GI number: 28210118
Start: 347823
End: 348983
Strand: Direct
Name: 28210118
Synonym: CTC00362
Alternate gene names: NA
Gene position: 347823-348983 (Clockwise)
Preceding gene: 28210117
Following gene: 28210119
Centisome position: 12.43
GC content: 21.79
Gene sequence:
>1161_bases ATGATAAAAATAAACAAAAAATTTTTATTAATATTTTTAGGAGCTTTTTTATATGCATTTTTTGAAGGAGGATACTTTGC TAACGCCATTTTTATATGTCTTGTAATTGTAGCTTTATTTTCATTTATGTACATATTAATCACTGCTAAACTAATGAAAG TAGAGATTACAAAACTTAAGAATAGTTTTATTACAGGAGAGAAAATAGAAATAAATATATCTTTACAAAACAAAAACTTT ATCCCCGTAAATTACATAGAAATTAAATATAATGAAGATATAAATTGGAGTAATGAAAGTTTAGCGAATATTTTCAATTT AAAAGGTAAAGAAGTAAAACATATGAAAATGCATACTACTTTTTATATAAGGGGGATTTATAATATAACAGATATAAGTT TAATTATAAAAGATGTATTTAATATATTATATTTTAAAAGACTATTAAATGATGAAATTAGTGTAAAGATATATCCAAGG GTTTTGCAAATTAATAATTTTCATAATAATAGTCAGGAAAAACAAGTAGTAGGCACAAATCTATTAGGAAATATAGAAAG TAATGTGTTTACTAAAGATATTAGAAAATATAAAGTTGGAGATAATTTAAAAAGAATTCATTGGAAAGTAAGTGCTAAAT ATGGTGAGTTATATACTAAAAATTATGAGACTTATTCTAATGAAGTGTATAATATATTTTTAGATATGAATAAGGAAATC TACAAAGAAGAAGATGGAGATATTATAGAAGAACGGACTATAGAATTTTTACTATCTTTTTGCAAATATCTTTTAGATAG AAATATATCTTCTATATTAAATATAAATAATGAAAAATCTATTAAGTTTGTATTAGAGAAATCTAGAGATATAAAAGACA TAGAGGAGTATTTTTTACATAATAAAAGTTTAGGAAAAGAAGATCTTGTTTATAATATGGGATTTAATTTTAATAAATTA AATAAAAGAGAAAGTATTATAATTATAATACCTTTTTTGAGAGAAGAGGTTTGGAAGAAAGCCTTAAAGCTAATACAACT TGGATATAAATTTAAGATATTTTACTATAAAATAGATTCTGAAATGTTATATCAAAAGGATATGCTAAAAGATATGGGGA TAGAGTGCATAAGTTTTAAAGGTATTGTGGATAATTTTTAA
Upstream 100 bases:
>100_bases GATTATCATCTAAAGGAAGATTAGAAGGAATTACAGAAAAAGAAGTATTGAGTTTGATTATTAATACCATACCTTTACCT AAAATAAAAGGTGATTTTTC
Downstream 100 bases:
>100_bases CCTAATTGTGTGAAATTCTCCCATCCTCTATAGGTGGTAGATGGATAGCACTTGCCGATAGACAACAAATATGATAAATT ACAATCAGTTATATTAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MIKINKKFLLIFLGAFLYAFFEGGYFANAIFICLVIVALFSFMYILITAKLMKVEITKLKNSFITGEKIEINISLQNKNF IPVNYIEIKYNEDINWSNESLANIFNLKGKEVKHMKMHTTFYIRGIYNITDISLIIKDVFNILYFKRLLNDEISVKIYPR VLQINNFHNNSQEKQVVGTNLLGNIESNVFTKDIRKYKVGDNLKRIHWKVSAKYGELYTKNYETYSNEVYNIFLDMNKEI YKEEDGDIIEERTIEFLLSFCKYLLDRNISSILNINNEKSIKFVLEKSRDIKDIEEYFLHNKSLGKEDLVYNMGFNFNKL NKRESIIIIIPFLREEVWKKALKLIQLGYKFKIFYYKIDSEMLYQKDMLKDMGIECISFKGIVDNF
Sequences:
>Translated_386_residues MIKINKKFLLIFLGAFLYAFFEGGYFANAIFICLVIVALFSFMYILITAKLMKVEITKLKNSFITGEKIEINISLQNKNF IPVNYIEIKYNEDINWSNESLANIFNLKGKEVKHMKMHTTFYIRGIYNITDISLIIKDVFNILYFKRLLNDEISVKIYPR VLQINNFHNNSQEKQVVGTNLLGNIESNVFTKDIRKYKVGDNLKRIHWKVSAKYGELYTKNYETYSNEVYNIFLDMNKEI YKEEDGDIIEERTIEFLLSFCKYLLDRNISSILNINNEKSIKFVLEKSRDIKDIEEYFLHNKSLGKEDLVYNMGFNFNKL NKRESIIIIIPFLREEVWKKALKLIQLGYKFKIFYYKIDSEMLYQKDMLKDMGIECISFKGIVDNF >Mature_386_residues MIKINKKFLLIFLGAFLYAFFEGGYFANAIFICLVIVALFSFMYILITAKLMKVEITKLKNSFITGEKIEINISLQNKNF IPVNYIEIKYNEDINWSNESLANIFNLKGKEVKHMKMHTTFYIRGIYNITDISLIIKDVFNILYFKRLLNDEISVKIYPR VLQINNFHNNSQEKQVVGTNLLGNIESNVFTKDIRKYKVGDNLKRIHWKVSAKYGELYTKNYETYSNEVYNIFLDMNKEI YKEEDGDIIEERTIEFLLSFCKYLLDRNISSILNINNEKSIKFVLEKSRDIKDIEEYFLHNKSLGKEDLVYNMGFNFNKL NKRESIIIIIPFLREEVWKKALKLIQLGYKFKIFYYKIDSEMLYQKDMLKDMGIECISFKGIVDNF
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45835; Mature: 45835
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKINKKFLLIFLGAFLYAFFEGGYFANAIFICLVIVALFSFMYILITAKLMKVEITKLK CEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSFITGEKIEINISLQNKNFIPVNYIEIKYNEDINWSNESLANIFNLKGKEVKHMKMHTT HCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEEE FYIRGIYNITDISLIIKDVFNILYFKRLLNDEISVKIYPRVLQINNFHNNSQEKQVVGTN EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHCCH LLGNIESNVFTKDIRKYKVGDNLKRIHWKVSAKYGELYTKNYETYSNEVYNIFLDMNKEI HHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHCCCCHHHCCEEEEEEEECCHHH YKEEDGDIIEERTIEFLLSFCKYLLDRNISSILNINNEKSIKFVLEKSRDIKDIEEYFLH HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC NKSLGKEDLVYNMGFNFNKLNKRESIIIIIPFLREEVWKKALKLIQLGYKFKIFYYKIDS CCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECC EMLYQKDMLKDMGIECISFKGIVDNF HHHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure MIKINKKFLLIFLGAFLYAFFEGGYFANAIFICLVIVALFSFMYILITAKLMKVEITKLK CEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSFITGEKIEINISLQNKNFIPVNYIEIKYNEDINWSNESLANIFNLKGKEVKHMKMHTT HCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEEE FYIRGIYNITDISLIIKDVFNILYFKRLLNDEISVKIYPRVLQINNFHNNSQEKQVVGTN EEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHHHHCCH LLGNIESNVFTKDIRKYKVGDNLKRIHWKVSAKYGELYTKNYETYSNEVYNIFLDMNKEI HHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHCCCCHHHCCEEEEEEEECCHHH YKEEDGDIIEERTIEFLLSFCKYLLDRNISSILNINNEKSIKFVLEKSRDIKDIEEYFLH HCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHC NKSLGKEDLVYNMGFNFNKLNKRESIIIIIPFLREEVWKKALKLIQLGYKFKIFYYKIDS CCCCCCCCEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECC EMLYQKDMLKDMGIECISFKGIVDNF HHHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA