| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210099
Identifier: 28210099
GI number: 28210099
Start: 328759
End: 329859
Strand: Direct
Name: 28210099
Synonym: CTC00340
Alternate gene names: NA
Gene position: 328759-329859 (Clockwise)
Preceding gene: 28210095
Following gene: 28210102
Centisome position: 11.74
GC content: 25.98
Gene sequence:
>1101_bases TTGATAGACTATATTTGTTCCTATATAATATTTAATATATACAGTTATAGATTAAGGGGGGGTATTTTGGATTACATAAA AGAAGTTAATATAAATGAAGCTATAATTCATATTTTAGATAATAATTCACAAGAACCTATTTTAAATGAATATAAAATAA ATTTATCAGATGAGGTTTATAATTTTATACTAAAACATATAGAAAGGTGCCTAAAGGATGAAGAATTAAAATATGCTATT TTTAAAGAAGAAAGAAATATAGTAAAAGAATTAAGTCAAGAGTATCTAAGTGGGCAAAATGATATTATAGATGTGTCTAA GGAAATAGCTAGGCAACTATTTGTACTTATGGAATCCCAAGGAAATATACCGTCTTGCGATTTAGTAGTAACCTCTATAT CAACTGAATATGGAAATATGTTAGGCATATTAAAAATGGATTATGTAAAAAATTATAGCCATAATATAAATTCACTTGAG GATAAAATAGGTATAGAAATAGTTCAGGAGATTACAGGACTCCCTACAAGTTCTCAAAAAATACAAAAGTGTGCCTTTAT AAAATTAGAAGAAGAGGGAAGCGAATATGATTTACTTGTAATAGATAAACAAAAGAAAAAGGATTCAGAAGATTATGGAG CAAATTATTTTATAAATAAACTCTTAGGTTGTAAAATAGTTGAAAATAGTAGAGATGAAACTAAAAATTTTGTAACAGCT AGTGAAAACTGGACAAGGGTAAATTTAAAAGAGAATGCAGAAGAAGCAGAAAAGGTAAGAAGCACTATAAAGAAAAAATT AAAAGAAGAAGAAAGTTTAGATTTATATGAAGTTTCCCAAGAGCTTTTTGGAGATAATAAGGAGGCAAAAGCAAGTTTTA TAGATTATGCATACTCAGAAGGTGTAAATGACAAAATAAATTTAGATAAGCATTGGATTGAAAAGAAGCTGAAAAGAACT AGATTAAAAATAGATAGAGATATAGATTTATATATAAATGAAGAAGCATATAGTGATGTAAATAGATTTCAAGTAAAAAG AAATGGAGATGGCTCCATAGATATAGTAATAAAAAACGTTATAAATTATATAGAAAAATAA
Upstream 100 bases:
>100_bases TAACTGGTTTTAAAATATACATATAGAAACCTCCACAAGTATTAACAATTTAAATGCTTCTAATTCTATAGTATTTAAAA GCCTTCAAATAAATTACAAT
Downstream 100 bases:
>100_bases ATAATAAAAGTGCTGACAGTAAACTGTCAGCACTTTTATTATTTATTAAGACTGTTTGAAGAACCTAAAACATTTTTTAT CTTATTTTGAACTAATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MIDYICSYIIFNIYSYRLRGGILDYIKEVNINEAIIHILDNNSQEPILNEYKINLSDEVYNFILKHIERCLKDEELKYAI FKEERNIVKELSQEYLSGQNDIIDVSKEIARQLFVLMESQGNIPSCDLVVTSISTEYGNMLGILKMDYVKNYSHNINSLE DKIGIEIVQEITGLPTSSQKIQKCAFIKLEEEGSEYDLLVIDKQKKKDSEDYGANYFINKLLGCKIVENSRDETKNFVTA SENWTRVNLKENAEEAEKVRSTIKKKLKEEESLDLYEVSQELFGDNKEAKASFIDYAYSEGVNDKINLDKHWIEKKLKRT RLKIDRDIDLYINEEAYSDVNRFQVKRNGDGSIDIVIKNVINYIEK
Sequences:
>Translated_366_residues MIDYICSYIIFNIYSYRLRGGILDYIKEVNINEAIIHILDNNSQEPILNEYKINLSDEVYNFILKHIERCLKDEELKYAI FKEERNIVKELSQEYLSGQNDIIDVSKEIARQLFVLMESQGNIPSCDLVVTSISTEYGNMLGILKMDYVKNYSHNINSLE DKIGIEIVQEITGLPTSSQKIQKCAFIKLEEEGSEYDLLVIDKQKKKDSEDYGANYFINKLLGCKIVENSRDETKNFVTA SENWTRVNLKENAEEAEKVRSTIKKKLKEEESLDLYEVSQELFGDNKEAKASFIDYAYSEGVNDKINLDKHWIEKKLKRT RLKIDRDIDLYINEEAYSDVNRFQVKRNGDGSIDIVIKNVINYIEK >Mature_366_residues MIDYICSYIIFNIYSYRLRGGILDYIKEVNINEAIIHILDNNSQEPILNEYKINLSDEVYNFILKHIERCLKDEELKYAI FKEERNIVKELSQEYLSGQNDIIDVSKEIARQLFVLMESQGNIPSCDLVVTSISTEYGNMLGILKMDYVKNYSHNINSLE DKIGIEIVQEITGLPTSSQKIQKCAFIKLEEEGSEYDLLVIDKQKKKDSEDYGANYFINKLLGCKIVENSRDETKNFVTA SENWTRVNLKENAEEAEKVRSTIKKKLKEEESLDLYEVSQELFGDNKEAKASFIDYAYSEGVNDKINLDKHWIEKKLKRT RLKIDRDIDLYINEEAYSDVNRFQVKRNGDGSIDIVIKNVINYIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42655; Mature: 42655
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYICSYIIFNIYSYRLRGGILDYIKEVNINEAIIHILDNNSQEPILNEYKINLSDEVY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEEECCHHHHH NFILKHIERCLKDEELKYAIFKEERNIVKELSQEYLSGQNDIIDVSKEIARQLFVLMESQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC GNIPSCDLVVTSISTEYGNMLGILKMDYVKNYSHNINSLEDKIGIEIVQEITGLPTSSQK CCCCCHHEEEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IQKCAFIKLEEEGSEYDLLVIDKQKKKDSEDYGANYFINKLLGCKIVENSRDETKNFVTA HHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCHHHHHEEEE SENWTRVNLKENAEEAEKVRSTIKKKLKEEESLDLYEVSQELFGDNKEAKASFIDYAYSE CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHC GVNDKINLDKHWIEKKLKRTRLKIDRDIDLYINEEAYSDVNRFQVKRNGDGSIDIVIKNV CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHEEEEECCCCCEEHHHHHH INYIEK HHHHCC >Mature Secondary Structure MIDYICSYIIFNIYSYRLRGGILDYIKEVNINEAIIHILDNNSQEPILNEYKINLSDEVY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEEECCHHHHH NFILKHIERCLKDEELKYAIFKEERNIVKELSQEYLSGQNDIIDVSKEIARQLFVLMESQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC GNIPSCDLVVTSISTEYGNMLGILKMDYVKNYSHNINSLEDKIGIEIVQEITGLPTSSQK CCCCCHHEEEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHH IQKCAFIKLEEEGSEYDLLVIDKQKKKDSEDYGANYFINKLLGCKIVENSRDETKNFVTA HHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCHHHHHEEEE SENWTRVNLKENAEEAEKVRSTIKKKLKEEESLDLYEVSQELFGDNKEAKASFIDYAYSE CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHC GVNDKINLDKHWIEKKLKRTRLKIDRDIDLYINEEAYSDVNRFQVKRNGDGSIDIVIKNV CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHCCHHHEEEEECCCCCEEHHHHHH INYIEK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA