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The map label for this gene is spoIID [H]

Identifier: 28210076

GI number: 28210076

Start: 297757

End: 298887

Strand: Direct

Name: spoIID [H]

Synonym: CTC00315

Alternate gene names: 28210076

Gene position: 297757-298887 (Clockwise)

Preceding gene: 28210075

Following gene: 28210077

Centisome position: 10.64

GC content: 26.61

Gene sequence:

>1131_bases
TTGGAATATAAATGTAGTTTTTTTCATATAGTTATTATAAAATACTTAAGATTAATAAAGGGAGAAAACTATATGAGAAA
AGGTGATCTAATACATTTATTAAAAAGATTTTTTGTAAGTATACTAGTGAGTATACTTATTGTAATTATTTTTTGTTTTA
TAATATTAAAGCCATCTTTGATAAAAAAAGAGAATGAAAATAATATAGTTAAAGATATAAGTAATAGTAAAAAGGATATA
AGTAATAAAGTTAAAAAAGTAAAGGTAAAAGTATATATATCAAAAGAGAAAAAAGTAATAGAATTAGATTTAGAAGATTA
TATAAAAGGAGTAATTTCTGCAGAAATGCCTGCGGAGTTCCATGAAGAAGCTTTAAAAGCTCAAGCTATAGCAGCAAGAA
CTTATGCTATACCACGTATAAAAGAATTGAATGGGGTTAATTGTAAAAATGCTAAAGGAGCAAATTTATGTGATACAGTT
CATTGCCAAGCATTTTTAACTAAAAAAGCTAGAATGGAAGGATGGTCAGAAAAAAAGAGAAACGAATACTGGAATAAGAT
TGAGAACGCAGTTAATAGTACCGCTGGTGAGGTTTTAGTGTACAAAGGTGAAATTATAAAGGGAGCATATTATTTTTCCA
CTAGTAGTGGCTTTACGGAAAATGGGGAAGATATATTTGCATCCACAGAACCATATTTAAAAAGTGTAAAAAGTCAGGGA
GAAGAAACTGCTCCAAAATATGAAAGTGTTAAGAAATATTCTCATGATGAATTTATAAATATAATCAATAAAAATTACCC
TAAGTCTATATCAAATAGTAAGAATTTAAAAAATGAAATAAAAATAAAGAGTAGGACTTCTGGAGGAAGTGTAAAAGAGA
TAACTGTTGGAAAAACTACTATGTCTGGTTCTAAATTTAGAAAAATTTTAAATCTTAATTCATCAAACTTTACCATAAAG
TTGGAAAAAAATAAAATAAATATAAACTGTAAGGGATATGGACATGGTGTAGGTATGAGCCAATGGGGAGCTAATGCATT
AGGTAAGAGTGGTAAAGATTATAAATATATATTAAAACATTATTATACAGGTGTAGAAATACAAAACTATAAAAAGGTTT
TAAGTAGATAA

Upstream 100 bases:

>100_bases
AAGTACAAATGTTACAGATGTGTATCATATAGATAGAGGGTATGCAAACATAGAGAAAAAACTCCAAGCATTAGGAGCAG
AGATTTATAGAATATAATAA

Downstream 100 bases:

>100_bases
TTAAAAATACTGAGAAGAAAGCTAGAGTTTTTCTTCTCAGTATTTTTGTTTTATTAAAATCAATGGATATTTGTCAAAAA
TTGATGAAAGTAGGAGAAAA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MEYKCSFFHIVIIKYLRLIKGENYMRKGDLIHLLKRFFVSILVSILIVIIFCFIILKPSLIKKENENNIVKDISNSKKDI
SNKVKKVKVKVYISKEKKVIELDLEDYIKGVISAEMPAEFHEEALKAQAIAARTYAIPRIKELNGVNCKNAKGANLCDTV
HCQAFLTKKARMEGWSEKKRNEYWNKIENAVNSTAGEVLVYKGEIIKGAYYFSTSSGFTENGEDIFASTEPYLKSVKSQG
EETAPKYESVKKYSHDEFINIINKNYPKSISNSKNLKNEIKIKSRTSGGSVKEITVGKTTMSGSKFRKILNLNSSNFTIK
LEKNKININCKGYGHGVGMSQWGANALGKSGKDYKYILKHYYTGVEIQNYKKVLSR

Sequences:

>Translated_376_residues
MEYKCSFFHIVIIKYLRLIKGENYMRKGDLIHLLKRFFVSILVSILIVIIFCFIILKPSLIKKENENNIVKDISNSKKDI
SNKVKKVKVKVYISKEKKVIELDLEDYIKGVISAEMPAEFHEEALKAQAIAARTYAIPRIKELNGVNCKNAKGANLCDTV
HCQAFLTKKARMEGWSEKKRNEYWNKIENAVNSTAGEVLVYKGEIIKGAYYFSTSSGFTENGEDIFASTEPYLKSVKSQG
EETAPKYESVKKYSHDEFINIINKNYPKSISNSKNLKNEIKIKSRTSGGSVKEITVGKTTMSGSKFRKILNLNSSNFTIK
LEKNKININCKGYGHGVGMSQWGANALGKSGKDYKYILKHYYTGVEIQNYKKVLSR
>Mature_376_residues
MEYKCSFFHIVIIKYLRLIKGENYMRKGDLIHLLKRFFVSILVSILIVIIFCFIILKPSLIKKENENNIVKDISNSKKDI
SNKVKKVKVKVYISKEKKVIELDLEDYIKGVISAEMPAEFHEEALKAQAIAARTYAIPRIKELNGVNCKNAKGANLCDTV
HCQAFLTKKARMEGWSEKKRNEYWNKIENAVNSTAGEVLVYKGEIIKGAYYFSTSSGFTENGEDIFASTEPYLKSVKSQG
EETAPKYESVKKYSHDEFINIINKNYPKSISNSKNLKNEIKIKSRTSGGSVKEITVGKTTMSGSKFRKILNLNSSNFTIK
LEKNKININCKGYGHGVGMSQWGANALGKSGKDYKYILKHYYTGVEIQNYKKVLSR

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 42763; Mature: 42763

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKCSFFHIVIIKYLRLIKGENYMRKGDLIHLLKRFFVSILVSILIVIIFCFIILKPSL
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IKKENENNIVKDISNSKKDISNKVKKVKVKVYISKEKKVIELDLEDYIKGVISAEMPAEF
HCCCCCCCHHHHHCCHHHHHHHHHHEEEEEEEEECCCEEEEECHHHHHHHHHCCCCCHHH
HEEALKAQAIAARTYAIPRIKELNGVNCKNAKGANLCDTVHCQAFLTKKARMEGWSEKKR
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
NEYWNKIENAVNSTAGEVLVYKGEIIKGAYYFSTSSGFTENGEDIFASTEPYLKSVKSQG
HHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHCC
EETAPKYESVKKYSHDEFINIINKNYPKSISNSKNLKNEIKIKSRTSGGSVKEITVGKTT
CCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCCC
MSGSKFRKILNLNSSNFTIKLEKNKININCKGYGHGVGMSQWGANALGKSGKDYKYILKH
CCHHHHHHHHCCCCCCEEEEEECCEEEEEEEEECCCCCHHHCCCHHHCCCCCHHHHHHHH
YYTGVEIQNYKKVLSR
HHCCCCHHHHHHHHCC
>Mature Secondary Structure
MEYKCSFFHIVIIKYLRLIKGENYMRKGDLIHLLKRFFVSILVSILIVIIFCFIILKPSL
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IKKENENNIVKDISNSKKDISNKVKKVKVKVYISKEKKVIELDLEDYIKGVISAEMPAEF
HCCCCCCCHHHHHCCHHHHHHHHHHEEEEEEEEECCCEEEEECHHHHHHHHHCCCCCHHH
HEEALKAQAIAARTYAIPRIKELNGVNCKNAKGANLCDTVHCQAFLTKKARMEGWSEKKR
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
NEYWNKIENAVNSTAGEVLVYKGEIIKGAYYFSTSSGFTENGEDIFASTEPYLKSVKSQG
HHHHHHHHHHHCCCCCCEEEEECCEEEEEEEEECCCCCCCCCCEEECCCCHHHHHHHHCC
EETAPKYESVKKYSHDEFINIINKNYPKSISNSKNLKNEIKIKSRTSGGSVKEITVGKTT
CCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHEEEEECCCCCCEEEEEECCCC
MSGSKFRKILNLNSSNFTIKLEKNKININCKGYGHGVGMSQWGANALGKSGKDYKYILKH
CCHHHHHHHHCCCCCCEEEEEECCEEEEEEEEECCCCCHHHCCCHHHCCCCCHHHHHHHH
YYTGVEIQNYKKVLSR
HHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3114424 [H]