| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is ywlE [H]
Identifier: 28210067
GI number: 28210067
Start: 289834
End: 290298
Strand: Direct
Name: ywlE [H]
Synonym: CTC00306
Alternate gene names: 28210067
Gene position: 289834-290298 (Clockwise)
Preceding gene: 28210066
Following gene: 28210068
Centisome position: 10.35
GC content: 28.82
Gene sequence:
>465_bases TTGGAGGAGCTAATGGATATATTATTTATTTGTACAGGGAATACATGTAGAAGCCCAATGGCAGAAGCTATATTTAATAA ATTTAATAAAACGTCATTAATAGCTAAGTCAGCGGGAGTAGCTGTGCATCCTAACAGTAAAGCTTCTTTTAATGCGGCAA AATTAGTAGATAGAAATTTAAATATGAATATCTATGAAAGATGTGCAGTACAATTAACAGAAAAGATATTAAAAGAGAGC TATTTAGTACTAACAATGACAGAAGGTTTGAAAAAAACATTAAAATATAATTTTCAAGAGTATGAAGAAAAAATATATAC TCTAAATGAATATGTCGGCGTAAAAGGAGAAATTTTAGACCCTTTCGGCGGCACGCTACCTATTTATCAACGAACCTTTG CACAATTAAAAGAAAATATATTATTACTTTTAAGTAAATTAGAAGAAGATAAAAGTATTCATTAA
Upstream 100 bases:
>100_bases GCTGGATTTAATATTATAGAGGTTTAAAATTTTTAAAATAAATAGTTGACATATAAAATAAGGTAGTATAGAATATTTTA CTGGTAGTTAGAAAAGTTAA
Downstream 100 bases:
>100_bases GGAGTACTCGTGTCTTCTTTTTTTGTAAAAATCATAAATTATTTGGAGGTGTAGTATTTTGAAAATTGCATTAGGAAGTG ACCATGCAGGGTTAAAGCTT
Product: phosphotyrosine protein phosphatase
Products: NA
Alternate protein names: LMPTP [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MEELMDILFICTGNTCRSPMAEAIFNKFNKTSLIAKSAGVAVHPNSKASFNAAKLVDRNLNMNIYERCAVQLTEKILKES YLVLTMTEGLKKTLKYNFQEYEEKIYTLNEYVGVKGEILDPFGGTLPIYQRTFAQLKENILLLLSKLEEDKSIH
Sequences:
>Translated_154_residues MEELMDILFICTGNTCRSPMAEAIFNKFNKTSLIAKSAGVAVHPNSKASFNAAKLVDRNLNMNIYERCAVQLTEKILKES YLVLTMTEGLKKTLKYNFQEYEEKIYTLNEYVGVKGEILDPFGGTLPIYQRTFAQLKENILLLLSKLEEDKSIH >Mature_154_residues MEELMDILFICTGNTCRSPMAEAIFNKFNKTSLIAKSAGVAVHPNSKASFNAAKLVDRNLNMNIYERCAVQLTEKILKES YLVLTMTEGLKKTLKYNFQEYEEKIYTLNEYVGVKGEILDPFGGTLPIYQRTFAQLKENILLLLSKLEEDKSIH
Specific function: Dephosphorylates the phosphotyrosine-containing proteins. Involved in ethanol stress resistance [H]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 17551; Mature: 17551
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEELMDILFICTGNTCRSPMAEAIFNKFNKTSLIAKSAGVAVHPNSKASFNAAKLVDRNL CHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCHHHHHHHCCC NMNIYERCAVQLTEKILKESYLVLTMTEGLKKTLKYNFQEYEEKIYTLNEYVGVKGEILD CCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEC PFGGTLPIYQRTFAQLKENILLLLSKLEEDKSIH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEELMDILFICTGNTCRSPMAEAIFNKFNKTSLIAKSAGVAVHPNSKASFNAAKLVDRNL CHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCEEECCCCCCCCHHHHHHHCCC NMNIYERCAVQLTEKILKESYLVLTMTEGLKKTLKYNFQEYEEKIYTLNEYVGVKGEILD CCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEC PFGGTLPIYQRTFAQLKENILLLLSKLEEDKSIH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7798145; 9384377 [H]