Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is yqhQ [H]

Identifier: 28210061

GI number: 28210061

Start: 284504

End: 285253

Strand: Direct

Name: yqhQ [H]

Synonym: CTC00300

Alternate gene names: 28210061

Gene position: 284504-285253 (Clockwise)

Preceding gene: 28210060

Following gene: 28210062

Centisome position: 10.16

GC content: 27.87

Gene sequence:

>750_bases
ATGCCTATTATTAGAGGATTTATTGCATTGGTAGAATCTCTAATAATAGGGATAAAAACTTTAAATTATTCAGCATCTTT
TTTTGAAGAAGATGAAGAAAAATCAAAATTTGATATATGGATTGAAAAAAAGTTTAGAGGGAATGCAGATAATATAATTA
TAGCTATTGTTATGGGAGTATCTTTTTTGCTTTCTATAAGTTTATTTGTGGCTTTGCCTACATTTATTGCAAACTTATTT
AAAAAATTAGGTATTGAAAGTTCGGTAGTTTTAAATATTATAGAGGGTATAATAAGAGTAGGGATATTTCTTTCTTACAT
ATATATAATAGGAAAGATGGATGATATTAATAGATTCTTTCAATATCATGGAGCGGAACATAAAACAATATTTTGTTATG
AGAATTCAGAAGAATTAACTGTTGAAAATGTGGCTAAATATTCTAGATTTCACCCAAGATGTGGTACTAACTTTTTGTTT
TTGGTTATGATTGTAAGTATAATTATCTTTTCTTTTACTGGATGGAACTCTTTATCAGAAAGAATGATGTATAGAATTAT
ACTTATACCAGTGGTATCAGGTACAACTTATGAAATTATAAAATGGCTAGGAAAAAGTAAAAGTAGAATATCTAAAATAA
TAGCAGCACCAGGATTGGCGTTACAAAAACTTACCACTAGAGAACCTGACACATTACAAATAGAAGTGGCTATAAAGGCT
TTAAAAGGTGCAGAAGGTATAGAAGATTAA

Upstream 100 bases:

>100_bases
AGTTAACGGAATTGCTACAGCAGTAAGAAAAAGTGACGGAGAAATTATTATAGATGTACAACAGTTCACCCCTTACAATA
AAAGAAATAAATTTTTTTCA

Downstream 100 bases:

>100_bases
AAAGGAGTAAGCTATAAAATGGTTATAAAAAATTGTGAAACCATACAAGACCTTTTATCAGAAGGCATTAAATCTTTAAA
AGAGGTAGGTATAGAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MPIIRGFIALVESLIIGIKTLNYSASFFEEDEEKSKFDIWIEKKFRGNADNIIIAIVMGVSFLLSISLFVALPTFIANLF
KKLGIESSVVLNIIEGIIRVGIFLSYIYIIGKMDDINRFFQYHGAEHKTIFCYENSEELTVENVAKYSRFHPRCGTNFLF
LVMIVSIIIFSFTGWNSLSERMMYRIILIPVVSGTTYEIIKWLGKSKSRISKIIAAPGLALQKLTTREPDTLQIEVAIKA
LKGAEGIED

Sequences:

>Translated_249_residues
MPIIRGFIALVESLIIGIKTLNYSASFFEEDEEKSKFDIWIEKKFRGNADNIIIAIVMGVSFLLSISLFVALPTFIANLF
KKLGIESSVVLNIIEGIIRVGIFLSYIYIIGKMDDINRFFQYHGAEHKTIFCYENSEELTVENVAKYSRFHPRCGTNFLF
LVMIVSIIIFSFTGWNSLSERMMYRIILIPVVSGTTYEIIKWLGKSKSRISKIIAAPGLALQKLTTREPDTLQIEVAIKA
LKGAEGIED
>Mature_248_residues
PIIRGFIALVESLIIGIKTLNYSASFFEEDEEKSKFDIWIEKKFRGNADNIIIAIVMGVSFLLSISLFVALPTFIANLFK
KLGIESSVVLNIIEGIIRVGIFLSYIYIIGKMDDINRFFQYHGAEHKTIFCYENSEELTVENVAKYSRFHPRCGTNFLFL
VMIVSIIIFSFTGWNSLSERMMYRIILIPVVSGTTYEIIKWLGKSKSRISKIIAAPGLALQKLTTREPDTLQIEVAIKAL
KGAEGIED

Specific function: Unknown

COG id: COG3872

COG function: function code R; Predicted metal-dependent enzyme

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010787
- ProDom:   PD131510 [H]

Pfam domain/function: PF07136 DUF1385 [H]

EC number: NA

Molecular weight: Translated: 28210; Mature: 28078

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIIRGFIALVESLIIGIKTLNYSASFFEEDEEKSKFDIWIEKKFRGNADNIIIAIVMGV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
SFLLSISLFVALPTFIANLFKKLGIESSVVLNIIEGIIRVGIFLSYIYIIGKMDDINRFF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QYHGAEHKTIFCYENSEELTVENVAKYSRFHPRCGTNFLFLVMIVSIIIFSFTGWNSLSE
HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
RMMYRIILIPVVSGTTYEIIKWLGKSKSRISKIIAAPGLALQKLTTREPDTLQIEVAIKA
HHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHH
LKGAEGIED
HHCCCCCCC
>Mature Secondary Structure 
PIIRGFIALVESLIIGIKTLNYSASFFEEDEEKSKFDIWIEKKFRGNADNIIIAIVMGV
CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
SFLLSISLFVALPTFIANLFKKLGIESSVVLNIIEGIIRVGIFLSYIYIIGKMDDINRFF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QYHGAEHKTIFCYENSEELTVENVAKYSRFHPRCGTNFLFLVMIVSIIIFSFTGWNSLSE
HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
RMMYRIILIPVVSGTTYEIIKWLGKSKSRISKIIAAPGLALQKLTTREPDTLQIEVAIKA
HHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHH
LKGAEGIED
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]