| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is cphA [H]
Identifier: 28210045
GI number: 28210045
Start: 264695
End: 267319
Strand: Direct
Name: cphA [H]
Synonym: CTC00282
Alternate gene names: 28210045
Gene position: 264695-267319 (Clockwise)
Preceding gene: 28210044
Following gene: 28210046
Centisome position: 9.46
GC content: 28.57
Gene sequence:
>2625_bases ATGAAAGCTTTAAATTATAAACATTTTTCAGGTAGGAATATATATTCCCATAGACCTTGTATAAAAATGGAGGTAGATTT AGAAGGATTTAGAGATATATCAAGTAAAGATATAAATGGGTTTAATAATAAACTACTAGAAATTCTACCAGGATTAAAAA AGCATAGGTGTGGTATAGATGAAGATGGTGGATTTGCAAAAAGATTGAAAGAGGGAACTTTTTTAGCACATATATGTGAA CATACAATAATAGAATTGCAAAATTTATTGGGAATAGAAGTTAGCTATGGAAAAGCTAGAGAGATAAAAGGAGATCATTA TTATATAGTGTATGAATGTAAATATAAAAATACAGCTATAGAGGCGGGTAATATAGCTATAAAGATAATAAATTCAATAA TAACTAAAAATGAATTTAGCCTAGAATTAGCATTAAATAAACTTAATAATATATTTAATAAAGAAAAGCTAGGACCTAGT ACATATTCTATTGTAAAGGCGGCACAAAAAAGGAATATACCTTTTATAAGAATAGGAGAAAAAAGTATATTACAATTGGG ATATGGAAAAACTTCGAAAATTGTAGAAGCTACTATAGGAAGCGATACTAAGTGTATATCTGTAGATATAGCATGTGATA AATACTTAACTAAGGAAATTTTAAAAAATCAATGTATTCCTACTCCATTAGGAGGAATTATAAACAATCCTATGGATATG CTTATAAAAGCAGACAGAATAGGTTATCCTGTGGTTATAAAACCAAGGTATGGTAATCAAGGAAAAGGAGTATTTGCTAA TTTAAATAATGAAGCAGATCTTTTAAAGGCATATAAAATATTATCTAAAGAATATGAAGATATAATTATAGAAAAGCATA TACAAGGAAAAGATTACAGAATTTGTGTGGTGGATTATAAGGTTGTAGCGGTTTCAGAAAGGATACCTCCGCATATAACA GGAAATGGAAAAAGTACAATAGAAAGTCTTATACATGAATTGAATAGAGACTGTAAAAGAGGAGAGGGACACGAAAAACC TTTAACTAAAATTAAAATAGATTTAAAGCTTATTGATAGTATTGGTAAGATGGGATTTAATATAAACTCTGTACCTAAAA AAGGTGAAAGAGTGTTTTTAAGAGAAAATGCAAATCTATCTACTGGTGGAATTGCTATTGATTGTACAGACTTAATATGT AATAAAAACATTGAAATGCTTGAAAGAGCTTCTAAAGCTGTAGGTTTAGATATTTGTGGCATAGATGTTTGTTGTACTGA TATATCTAAACCTATTGATGGTGCAATTATTGAGGTGAATGCAGCTCCAGGCATAAGAATGCACGAATACCCTTATAAAG GACAAAATAGATATGTAGGAGAAGCTATAGTTAATATGATATTTAAAGACATAAAGGATCAAGTTCCATTGATATCTGTA ACTGGAACTAATGGGAAGACTACAACAACTAGGCTAATAGCTCATATTTTTGATTTAGCTGGCTATAAAACAGGGTTTAC TAGTACAGGAGGCATATATATAGATGGAAATATAATCGATGAAGGGGACACCACAGGGTATAATAGTGCATTAACGCTAC TTACTAATAAAGAGGTGGAAGCAATAGTTCTAGAAACAGCTAGGGGAGGTATTATAAAGAAAGGATTAGCTTATGATCTA GCTGATGTAGGAGTAATTACAAACATAACCACTGATCATTTAGGGTTAGATGGTATTGATACTTTGGAGGATTTAGCTTA TGTAAAGTCTCTTATAGGAGAAGCAGTTAAAGATGAAGGATACGTAGTGTTAAATGCAGATGATGTAATGAGTATGAAAA TAATAAATAGAATAAAAAGCAATGTTATATTGTTTTCTAAAGATAAAAATAATAAATTTATAAGAGAATACCTTAATAAA GGGTGCTTTGCTATATATGTTCACGAAGGTTATATGTATATAGAAAAAGATAATAAAATAATCCCATTAATAAATATAAA CAATATAAAAATAGGATTACAAGGTAAATTAGATTATAATATTGAAAATGCTATGGCAGCATGCGCAGTGGGAATATCTA TGGGTATCAATCCTATTTATATAAGAAAAGCTATGGAAAGTTTTAATTTAGATGAAAATTATATACCAGGAAGATTCAAT ATATACAGTTTTAAAGATAGAACAATAATATTAGATTATGGACATAATGCAGAAGGATATAATGCAGTTATTAAAGGTGC AAAAAAGCTAAAGCATAATAGATTAATTGGAGTAATAGGAGCACCAGGAGATAGAAATGATGAACATTTAATTAAATTAG GAGAAATAGGTGGTAAAAACTTTGATTACATATATATCAAAGAAGATAAGCACAATAGAACAAGAAAAAAAGGTGATGTA GCAAAGCTATTAAAAACAGGCATATTAAATACAGGATTTAATAAAGATAATATAAAGATTATTTTAAAGGAAGAGGATGC CTTAAAAGAAGCTATTAAATACAGTAAAAAAGGGGATTTAATAGTTACGTTTTTTGAAGAATTTAATCCACTATTAAATA TAGTAAAAAAAGAGATGGAAAATGGAGGAGATAAACATAAATCTTCTAATGAAGCATTAGCATAA
Upstream 100 bases:
>100_bases AGAACAGAAGTCAGAAGAGATTTTATCTATATTTAACATAAGAATGCATGTATTAAAAAAAGACGATAAATTTGATTTGA GTAGGAGGATACTTTAAACA
Downstream 100 bases:
>100_bases GCCGATACTTGAGATAGAGTTATAAAAAGTATTATACTTAATAAAGAAATAGTAAATACTTTTTTAGTAAATGTGGAGGT AAAGTATGAAAATAAAGGCT
Product: cyanophycin synthetase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MKALNYKHFSGRNIYSHRPCIKMEVDLEGFRDISSKDINGFNNKLLEILPGLKKHRCGIDEDGGFAKRLKEGTFLAHICE HTIIELQNLLGIEVSYGKAREIKGDHYYIVYECKYKNTAIEAGNIAIKIINSIITKNEFSLELALNKLNNIFNKEKLGPS TYSIVKAAQKRNIPFIRIGEKSILQLGYGKTSKIVEATIGSDTKCISVDIACDKYLTKEILKNQCIPTPLGGIINNPMDM LIKADRIGYPVVIKPRYGNQGKGVFANLNNEADLLKAYKILSKEYEDIIIEKHIQGKDYRICVVDYKVVAVSERIPPHIT GNGKSTIESLIHELNRDCKRGEGHEKPLTKIKIDLKLIDSIGKMGFNINSVPKKGERVFLRENANLSTGGIAIDCTDLIC NKNIEMLERASKAVGLDICGIDVCCTDISKPIDGAIIEVNAAPGIRMHEYPYKGQNRYVGEAIVNMIFKDIKDQVPLISV TGTNGKTTTTRLIAHIFDLAGYKTGFTSTGGIYIDGNIIDEGDTTGYNSALTLLTNKEVEAIVLETARGGIIKKGLAYDL ADVGVITNITTDHLGLDGIDTLEDLAYVKSLIGEAVKDEGYVVLNADDVMSMKIINRIKSNVILFSKDKNNKFIREYLNK GCFAIYVHEGYMYIEKDNKIIPLININNIKIGLQGKLDYNIENAMAACAVGISMGINPIYIRKAMESFNLDENYIPGRFN IYSFKDRTIILDYGHNAEGYNAVIKGAKKLKHNRLIGVIGAPGDRNDEHLIKLGEIGGKNFDYIYIKEDKHNRTRKKGDV AKLLKTGILNTGFNKDNIKIILKEEDALKEAIKYSKKGDLIVTFFEEFNPLLNIVKKEMENGGDKHKSSNEALA
Sequences:
>Translated_874_residues MKALNYKHFSGRNIYSHRPCIKMEVDLEGFRDISSKDINGFNNKLLEILPGLKKHRCGIDEDGGFAKRLKEGTFLAHICE HTIIELQNLLGIEVSYGKAREIKGDHYYIVYECKYKNTAIEAGNIAIKIINSIITKNEFSLELALNKLNNIFNKEKLGPS TYSIVKAAQKRNIPFIRIGEKSILQLGYGKTSKIVEATIGSDTKCISVDIACDKYLTKEILKNQCIPTPLGGIINNPMDM LIKADRIGYPVVIKPRYGNQGKGVFANLNNEADLLKAYKILSKEYEDIIIEKHIQGKDYRICVVDYKVVAVSERIPPHIT GNGKSTIESLIHELNRDCKRGEGHEKPLTKIKIDLKLIDSIGKMGFNINSVPKKGERVFLRENANLSTGGIAIDCTDLIC NKNIEMLERASKAVGLDICGIDVCCTDISKPIDGAIIEVNAAPGIRMHEYPYKGQNRYVGEAIVNMIFKDIKDQVPLISV TGTNGKTTTTRLIAHIFDLAGYKTGFTSTGGIYIDGNIIDEGDTTGYNSALTLLTNKEVEAIVLETARGGIIKKGLAYDL ADVGVITNITTDHLGLDGIDTLEDLAYVKSLIGEAVKDEGYVVLNADDVMSMKIINRIKSNVILFSKDKNNKFIREYLNK GCFAIYVHEGYMYIEKDNKIIPLININNIKIGLQGKLDYNIENAMAACAVGISMGINPIYIRKAMESFNLDENYIPGRFN IYSFKDRTIILDYGHNAEGYNAVIKGAKKLKHNRLIGVIGAPGDRNDEHLIKLGEIGGKNFDYIYIKEDKHNRTRKKGDV AKLLKTGILNTGFNKDNIKIILKEEDALKEAIKYSKKGDLIVTFFEEFNPLLNIVKKEMENGGDKHKSSNEALA >Mature_874_residues MKALNYKHFSGRNIYSHRPCIKMEVDLEGFRDISSKDINGFNNKLLEILPGLKKHRCGIDEDGGFAKRLKEGTFLAHICE HTIIELQNLLGIEVSYGKAREIKGDHYYIVYECKYKNTAIEAGNIAIKIINSIITKNEFSLELALNKLNNIFNKEKLGPS TYSIVKAAQKRNIPFIRIGEKSILQLGYGKTSKIVEATIGSDTKCISVDIACDKYLTKEILKNQCIPTPLGGIINNPMDM LIKADRIGYPVVIKPRYGNQGKGVFANLNNEADLLKAYKILSKEYEDIIIEKHIQGKDYRICVVDYKVVAVSERIPPHIT GNGKSTIESLIHELNRDCKRGEGHEKPLTKIKIDLKLIDSIGKMGFNINSVPKKGERVFLRENANLSTGGIAIDCTDLIC NKNIEMLERASKAVGLDICGIDVCCTDISKPIDGAIIEVNAAPGIRMHEYPYKGQNRYVGEAIVNMIFKDIKDQVPLISV TGTNGKTTTTRLIAHIFDLAGYKTGFTSTGGIYIDGNIIDEGDTTGYNSALTLLTNKEVEAIVLETARGGIIKKGLAYDL ADVGVITNITTDHLGLDGIDTLEDLAYVKSLIGEAVKDEGYVVLNADDVMSMKIINRIKSNVILFSKDKNNKFIREYLNK GCFAIYVHEGYMYIEKDNKIIPLININNIKIGLQGKLDYNIENAMAACAVGISMGINPIYIRKAMESFNLDENYIPGRFN IYSFKDRTIILDYGHNAEGYNAVIKGAKKLKHNRLIGVIGAPGDRNDEHLIKLGEIGGKNFDYIYIKEDKHNRTRKKGDV AKLLKTGILNTGFNKDNIKIILKEEDALKEAIKYSKKGDLIVTFFEEFNPLLNIVKKEMENGGDKHKSSNEALA
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 97375; Mature: 97375
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS50975 ATP_GRASP ; PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALNYKHFSGRNIYSHRPCIKMEVDLEGFRDISSKDINGFNNKLLEILPGLKKHRCGID CCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCC EDGGFAKRLKEGTFLAHICEHTIIELQNLLGIEVSYGKAREIKGDHYYIVYECKYKNTAI CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEEEEEECCCEE EAGNIAIKIINSIITKNEFSLELALNKLNNIFNKEKLGPSTYSIVKAAQKRNIPFIRIGE ECCCCHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECC KSILQLGYGKTSKIVEATIGSDTKCISVDIACDKYLTKEILKNQCIPTPLGGIINNPMDM HHHEEECCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH LIKADRIGYPVVIKPRYGNQGKGVFANLNNEADLLKAYKILSKEYEDIIIEKHIQGKDYR EEECCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEE ICVVDYKVVAVSERIPPHITGNGKSTIESLIHELNRDCKRGEGHEKPLTKIKIDLKLIDS EEEEEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH IGKMGFNINSVPKKGERVFLRENANLSTGGIAIDCTDLICNKNIEMLERASKAVGLDICG HHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCEEEEC IDVCCTDISKPIDGAIIEVNAAPGIRMHEYPYKGQNRYVGEAIVNMIFKDIKDQVPLISV HHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE TGTNGKTTTTRLIAHIFDLAGYKTGFTSTGGIYIDGNIIDEGDTTGYNSALTLLTNKEVE ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCCCCCCCCEEEEEECCCEE AIVLETARGGIIKKGLAYDLADVGVITNITTDHLGLDGIDTLEDLAYVKSLIGEAVKDEG EEEEECCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC YVVLNADDVMSMKIINRIKSNVILFSKDKNNKFIREYLNKGCFAIYVHEGYMYIEKDNKI EEEEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEEEECCEEEEECCCCE IPLININNIKIGLQGKLDYNIENAMAACAVGISMGINPIYIRKAMESFNLDENYIPGRFN EEEEEECEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEE IYSFKDRTIILDYGHNAEGYNAVIKGAKKLKHNRLIGVIGAPGDRNDEHLIKLGEIGGKN EEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCC FDYIYIKEDKHNRTRKKGDVAKLLKTGILNTGFNKDNIKIILKEEDALKEAIKYSKKGDL CEEEEEECCCCCCCHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCE IVTFFEEFNPLLNIVKKEMENGGDKHKSSNEALA EEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKALNYKHFSGRNIYSHRPCIKMEVDLEGFRDISSKDINGFNNKLLEILPGLKKHRCGID CCCCCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCC EDGGFAKRLKEGTFLAHICEHTIIELQNLLGIEVSYGKAREIKGDHYYIVYECKYKNTAI CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEEEEEEEECCCEE EAGNIAIKIINSIITKNEFSLELALNKLNNIFNKEKLGPSTYSIVKAAQKRNIPFIRIGE ECCCCHHEEHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECC KSILQLGYGKTSKIVEATIGSDTKCISVDIACDKYLTKEILKNQCIPTPLGGIINNPMDM HHHEEECCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH LIKADRIGYPVVIKPRYGNQGKGVFANLNNEADLLKAYKILSKEYEDIIIEKHIQGKDYR EEECCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEE ICVVDYKVVAVSERIPPHITGNGKSTIESLIHELNRDCKRGEGHEKPLTKIKIDLKLIDS EEEEEEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH IGKMGFNINSVPKKGERVFLRENANLSTGGIAIDCTDLICNKNIEMLERASKAVGLDICG HHHCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCEEEEC IDVCCTDISKPIDGAIIEVNAAPGIRMHEYPYKGQNRYVGEAIVNMIFKDIKDQVPLISV HHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE TGTNGKTTTTRLIAHIFDLAGYKTGFTSTGGIYIDGNIIDEGDTTGYNSALTLLTNKEVE ECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECEEECCCCCCCCCCEEEEEECCCEE AIVLETARGGIIKKGLAYDLADVGVITNITTDHLGLDGIDTLEDLAYVKSLIGEAVKDEG EEEEECCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC YVVLNADDVMSMKIINRIKSNVILFSKDKNNKFIREYLNKGCFAIYVHEGYMYIEKDNKI EEEEECCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEEEECCEEEEECCCCE IPLININNIKIGLQGKLDYNIENAMAACAVGISMGINPIYIRKAMESFNLDENYIPGRFN EEEEEECEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEE IYSFKDRTIILDYGHNAEGYNAVIKGAKKLKHNRLIGVIGAPGDRNDEHLIKLGEIGGKN EEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCC FDYIYIKEDKHNRTRKKGDVAKLLKTGILNTGFNKDNIKIILKEEDALKEAIKYSKKGDL CEEEEEECCCCCCCHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCE IVTFFEEFNPLLNIVKKEMENGGDKHKSSNEALA EEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11131019 [H]