Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is cotI [H]

Identifier: 28210036

GI number: 28210036

Start: 249564

End: 250577

Strand: Direct

Name: cotI [H]

Synonym: CTC00273

Alternate gene names: 28210036

Gene position: 249564-250577 (Clockwise)

Preceding gene: 28210034

Following gene: 28210037

Centisome position: 8.92

GC content: 28.21

Gene sequence:

>1014_bases
GTGATTACTATGATGAGGGAATTTGAAATAGAAAGACAGTTTGATATTAAAATTGAAAAACTTAAACCTAATAAGGGAGT
GTATTTTTTAAGAACTAATGAAGGCACAAGGTGCCTAAAAAAAATTAACTATGGTATTCAAAAGTTATTGTTTGTTTATG
GTGCAAAAGAGCATCTTGTTAAGAATGGATTTCCTAAAGTTGATAGATATTATATGAACACTTATGGAGAGCCCTTTGCC
ATTGTAAATGAAGATATCTATACATTATCTGAATGGATAGATGGAAGAGAGGCGGATTTTAAGAATAAAGAAGATGTAGC
TAATGCAGCTAAAAGCTTAGCACATATGCATATAGCCTCTAAAGGGTATGAACCTCCTGAAAATAGCAAATTAAAGACAG
ATCTTTGGAGATGGCCAAGTCTTATGAATAAAAGGGTTAGAGCGTTAGAAAAAATGCGTCATATGACTAGAAAAAGAAAT
AATAAAAACGAGTTTGAAATGAATTATATAAAAAATGTTCAATTCTATAAAGATTTAGGAATAAGAGCTATAAATGTATT
AGAAAGTTCAGCCTATGAGGATTTATGTAAAATATCCGAAGAGGATAAAAATTTTTGCCACCATGATTATACCTATCATA
ATATAATAATAGACGAAGATGATTCTATAAACGTAATAGACTTTGATTATTGTAAAAGAGAGATAAGAGCATATGATATA
TCTTCTTTTATGATAAAAGTGTTAAAGAGAGTAGATTGGGATATAGAATATGCTAAATTGATATTAGAATCTTATAATAA
AGAATATCCCCTGAGAGAAGAAGAATACAGAGTTTTATTTGCATTTTTATTATTTCCTCAAAGATTTTGGAGATTATCTA
ATAGATATTTTTATAATGAAACAAATTGGGCTACAAAATCTTTTGATAGGAAAATGAGTAGGTTAATAGATGAACAAGAT
GCGTATATGAAGTTTATAGAAAATTTTAAAACTGATTATGACCAAAAAGAGTAA

Upstream 100 bases:

>100_bases
ATATTTCATTATATTAATATGTTACATAAAGTGTTAATAATATAAAATTTTATTACTGTTCTTCTAAAATTTATAAAGAA
TACATATAGATTATAGAGAG

Downstream 100 bases:

>100_bases
ATATTTATTATATGTTCTATATAAAACCCATGTAAAATATTTTTACGTGGGTTTTATATTTAATAAGTATAATTTTTGCA
AATTTACTTTAGATAAAGAT

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA
IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN
NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI
SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD
AYMKFIENFKTDYDQKE

Sequences:

>Translated_337_residues
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA
IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN
NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI
SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD
AYMKFIENFKTDYDQKE
>Mature_337_residues
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLVKNGFPKVDRYYMNTYGEPFA
IVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRN
NKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI
SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNETNWATKSFDRKMSRLIDEQD
AYMKFIENFKTDYDQKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 40923; Mature: 40923

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLV
CCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
KNGFPKVDRYYMNTYGEPFAIVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIAS
HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRNNKNEFEMNYIKNVQFYKDLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
IRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI
HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHH
SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNE
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC
TNWATKSFDRKMSRLIDEQDAYMKFIENFKTDYDQKE
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLLFVYGAKEHLV
CCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHH
KNGFPKVDRYYMNTYGEPFAIVNEDIYTLSEWIDGREADFKNKEDVANAAKSLAHMHIAS
HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KGYEPPENSKLKTDLWRWPSLMNKRVRALEKMRHMTRKRNNKNEFEMNYIKNVQFYKDLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
IRAINVLESSAYEDLCKISEEDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDI
HHHHHHHHHHHHHHHHHCCHHHCCHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHH
SSFMIKVLKRVDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNE
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC
TNWATKSFDRKMSRLIDEQDAYMKFIENFKTDYDQKE
CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]